CuGenDBv2

Gene ID	Lag0012294
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	ACT domain-containing protein
Genome location	chr1:39630015..39632562
RNA-Seq Expression	Lag0012294
Synteny	Lag0012294
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0005634 - nucleus (cellular component) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6595565.1 hypothetical protein SDJN03_12118, partial [Cucurbita argyrosperma subsp. sororia]

2.2e-33

70.49

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Query:  GKKRKQKAPVARDRRVEERRRTAEFELIFPVALKWVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKII
        G + ++KA  +     E   +  EF+     +   VVNVESL RGFLINV+LE+NSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENE TKI+
Subjt:  GKKRKQKAPVARDRRVEERRRTAEFELIFPVALKWVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKII

Query:  KAQVVKKAVKQAIKEWSESNEQ
        K QVVKKAVKQAIKEWSESN Q
Subjt:  KAQVVKKAVKQAIKEWSESNEQ

XP_008464258.1 PREDICTED: uncharacterized protein LOC103502184 [Cucumis melo]

4.8e-33

69.92

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Query:  GKKRKQKAPVARDRRVEERRRTAEFELIFPVALKWVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKII
        G + ++KA  A +        + EF      +   VVNVES+ERGFLINVFLERNSPGLLVRILEAFEKLGL VLDA++SCSDCFQLQAVGEENEG KII
Subjt:  GKKRKQKAPVARDRRVEERRRTAEFELIFPVALKWVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKII

Query:  KAQVVKKAVKQAIKEWSESNEQA
        KAQVVK AVKQAIKEWSES+ QA
Subjt:  KAQVVKKAVKQAIKEWSESNEQA

XP_022950375.1 uncharacterized protein LOC111453491 [Cucurbita moschata]

8.7e-35

93.18

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Query:  VVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKAQVVKKAVKQAIKEWSESNEQA
        VVNVE+LERGFLINVF ERNSPGLLV+ILEAFEKLGLEVLDA+VSCSDCFQLQAVGEENEGTKIIKAQVVK AVKQAIKEWSESN QA
Subjt:  VVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKAQVVKKAVKQAIKEWSESNEQA

XP_022977370.1 uncharacterized protein LOC111477723 [Cucurbita maxima]

3.9e-35

94.32

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Query:  VVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKAQVVKKAVKQAIKEWSESNEQA
        VVNVE LERGFLINVF ERNSPGLLVRILEAFEKLGLEVLDA+VSCSDCFQLQAVGEENEGTKIIKAQVVK AVKQAIKEWSESN QA
Subjt:  VVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKAQVVKKAVKQAIKEWSESNEQA

XP_038882922.1 uncharacterized protein LOC120074022 [Benincasa hispida]

6.1e-36

73.17

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Query:  GKKRKQKAPVARDRRVEERRRTAEFELIFPVALKWVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKII
        G + ++KA  +   + +E R +             +VNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKII
Subjt:  GKKRKQKAPVARDRRVEERRRTAEFELIFPVALKWVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKII

Query:  KAQVVKKAVKQAIKEWSESNEQA
        KAQVVK AVKQAIKEWSESN QA
Subjt:  KAQVVKKAVKQAIKEWSESNEQA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L039 Uncharacterized protein

5.2e-33

89.66

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Query:  VVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKAQVVKKAVKQAIKEWSESNEQ
        VVNVES+ERGFLINVFLERNSPGLLVRILEAFEKLGL VLDA++SCSDCFQLQA GEENEG KIIKAQVVK AVKQAIKEWSES+ Q
Subjt:  VVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKAQVVKKAVKQAIKEWSESNEQ

A0A1S3CLI8 uncharacterized protein LOC103502184

2.3e-33

69.92

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Query:  GKKRKQKAPVARDRRVEERRRTAEFELIFPVALKWVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKII
        G + ++KA  A +        + EF      +   VVNVES+ERGFLINVFLERNSPGLLVRILEAFEKLGL VLDA++SCSDCFQLQAVGEENEG KII
Subjt:  GKKRKQKAPVARDRRVEERRRTAEFELIFPVALKWVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKII

Query:  KAQVVKKAVKQAIKEWSESNEQA
        KAQVVK AVKQAIKEWSES+ QA
Subjt:  KAQVVKKAVKQAIKEWSESNEQA

A0A6J1GFJ5 uncharacterized protein LOC111453491

4.2e-35

93.18

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Query:  VVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKAQVVKKAVKQAIKEWSESNEQA
        VVNVE+LERGFLINVF ERNSPGLLV+ILEAFEKLGLEVLDA+VSCSDCFQLQAVGEENEGTKIIKAQVVK AVKQAIKEWSESN QA
Subjt:  VVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKAQVVKKAVKQAIKEWSESNEQA

A0A6J1HSD7 uncharacterized protein LOC111466169

5.2e-33

68.85

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Query:  GKKRKQKAPVARDRRVEERRRTAEFELIFPVALKWVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKII
        G + ++KA  +     E   +  EF+     +   VVNVESL RGFLINV++E+NSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENE TK++
Subjt:  GKKRKQKAPVARDRRVEERRRTAEFELIFPVALKWVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKII

Query:  KAQVVKKAVKQAIKEWSESNEQ
        K QVVKKAVKQAIKEWSESN Q
Subjt:  KAQVVKKAVKQAIKEWSESNEQ

A0A6J1IM47 uncharacterized protein LOC111477723

1.9e-35

94.32

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Query:  VVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKAQVVKKAVKQAIKEWSESNEQA
        VVNVE LERGFLINVF ERNSPGLLVRILEAFEKLGLEVLDA+VSCSDCFQLQAVGEENEGTKIIKAQVVK AVKQAIKEWSESN QA
Subjt:  VVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKAQVVKKAVKQAIKEWSESNEQA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G40435.1 BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1)

1.1e-19

52.33

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Query:  VVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKAQVVKKAVKQAIKEWSESNE
        +V VE+L++GF+INVF  +N PG+LV +LEAFE +GL VL+A  SC+D F L A+G ENE  + + A+ VK+AV  AI+ W E N+
Subjt:  VVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKAQVVKKAVKQAIKEWSESNE

AT3G56220.1 transcription regulators

1.1e-16

48.84

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Query:  VVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVG-EENEGTKIIKAQVVKKAVKQAIKEWSESN
        +V VE+LE+GF+I V   +N  G+LV +LE FE LGL+V++A VSC+D F L A+G   N+    I A+ VK+AV +AI+ WS+S+
Subjt:  VVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVG-EENEGTKIIKAQVVKKAVKQAIKEWSESN

Sequences

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CDS sequence

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ATGGATCCAATGGACAAAACCGGCAAGTGGGACGGGCCAAGACCGAAGGGGTCGGGCTTTATGGTCGGCCTCGGCCCGCTTGCGCGGGTCGGGCTTGTCCGGCTTCGCTT
GGTCCCCATCGCCTCTAGCCGCCTCGGTTCAGCCTGGCCACGTCTTCCTCCTCTTCTACAAATTTTACCGTTGGTGGCACGTGAAGGTCAACTGATCGGCAAGGGAAAGA
AAAGAAAGCAAAAGGCTCCGGTGGCGCGTGACCGGCGAGTGGAGGAGAGACGGCGGACGGCGGAGTTTGAATTGATTTTTCCGGTGGCTCTGAAATGGGTGGTGAATGTG
GAGAGTTTAGAGAGGGGATTTCTAATAAACGTGTTTTTGGAAAGGAATTCCCCAGGATTGCTGGTTCGGATTCTAGAAGCCTTTGAGAAATTGGGACTCGAAGTCCTCGA
CGCCAACGTGTCTTGTTCTGATTGTTTCCAACTCCAGGCTGTTGGGGAAGAGAATGAAGGCACCAAAATCATAAAGGCCCAAGTGGTGAAAAAAGCAGTAAAGCAAGCAA
TCAAGGAATGGAGTGAAAGTAATGAGCAGGCATGA

mRNA sequence

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Protein sequence

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MDPMDKTGKWDGPRPKGSGFMVGLGPLARVGLVRLRLVPIASSRLGSAWPRLPPLLQILPLVAREGQLIGKGKKRKQKAPVARDRRVEERRRTAEFELIFPVALKWVVNV
ESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKAQVVKKAVKQAIKEWSESNEQA

Lag0012294 (gene) of Sponge gourd (AG-4) v1 genome