CuGenDBv2

Gene ID	Lag0012328
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	kinetochore protein SPC24 homolog
Genome location	chr1:40035470..40036108
RNA-Seq Expression	Lag0012328
Synteny	Lag0012328
Gene Ontology terms	GO:0051983 - regulation of chromosome segregation (biological process)
InterPro domains	IPR044951 - Kinetochore protein SPC24-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6595410.1 Kinetochore protein SPC24-like protein, partial [Cucurbita argyrosperma subsp. sororia]

5.8e-34

72.27

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Query:  MNYEALLSYGEDLVAYLKDQNEVQTLNQCLEHFKALRSSCDDDFSNVHSSLQDYEKKIEECRQKTEEAKARTIVDDEMDILEKEFEEELGKSVCSWRRL-
        MN E LLSYG+DLVA LKDQN+VQTLNQCL+HF AL+SS  DD  NVHSS+QDYEKKIEECR KTEEAKART+ DDEMDILEKE EEE+ +     +R+ 
Subjt:  MNYEALLSYGEDLVAYLKDQNEVQTLNQCLEHFKALRSSCDDDFSNVHSSLQDYEKKIEECRQKTEEAKARTIVDDEMDILEKEFEEELGKSVCSWRRL-

Query:  --DKKQAMKKLEKQELRAQ
          +KKQA KKLE+QELRAQ
Subjt:  --DKKQAMKKLEKQELRAQ

KAG7027420.1 hypothetical protein SDJN02_11433, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.3e-33

71.43

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Query:  MNYEALLSYGEDLVAYLKDQNEVQTLNQCLEHFKALRSSCDDDFSNVHSSLQDYEKKIEECRQKTEEAKARTIVDDEMDILEKEFEEELGKSVCSWRRL-
        MN E LLSYG+DLVA LKDQN+VQTLNQCL+HF AL+SS  DD  NVHSS+QDYEKKIEECR KTEEAKART+ DDEMDILEKE EEE+ +     +R+ 
Subjt:  MNYEALLSYGEDLVAYLKDQNEVQTLNQCLEHFKALRSSCDDDFSNVHSSLQDYEKKIEECRQKTEEAKARTIVDDEMDILEKEFEEELGKSVCSWRRL-

Query:  --DKKQAMKKLEKQELRAQ
          ++KQA KKLE+QELRAQ
Subjt:  --DKKQAMKKLEKQELRAQ

XP_022144074.1 uncharacterized protein LOC111013852 isoform X1 [Momordica charantia]

7.5e-34

64.18

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Query:  MNYEALLSYGEDLVAYLKDQNEVQTLNQCLEHFKALRSSCDDDFSNVHSSLQDYEKKIEECRQKTEEAKARTIVDDEMDILEKEFEEELGKSVCSWRRL-
        +N E LLSYG DLVA LKDQ +VQTLNQCLEH KAL+S CDDDFSNVHSS+QDYEKKIE CRQKTEEAKART+ D EMD+LE+E EEEL K       + 
Subjt:  MNYEALLSYGEDLVAYLKDQNEVQTLNQCLEHFKALRSSCDDDFSNVHSSLQDYEKKIEECRQKTEEAKARTIVDDEMDILEKEFEEELGKSVCSWRRL-

Query:  -----------------DKKQAMKKLEKQELRAQ
                         ++KQAMKKLE+QELRAQ
Subjt:  -----------------DKKQAMKKLEKQELRAQ

XP_022931907.1 uncharacterized protein LOC111438184 [Cucurbita moschata]

1.9e-32

63.43

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Query:  MNYEALLSYGEDLVAYLKDQNEVQTLNQCLEHFKALRSSCDDDFSNVHSSLQDYEKKIEECRQKTEEAKARTIVDDEMDILEKEFEEELGKSVCSWRRL-
        MN E LLSYG+DLVA LKDQN+VQTLNQCL+HF AL+SS  DD  NVHSS+QDYEKKIEECR KTEEAKART+ DDEMDILEKE EEE+ +       + 
Subjt:  MNYEALLSYGEDLVAYLKDQNEVQTLNQCLEHFKALRSSCDDDFSNVHSSLQDYEKKIEECRQKTEEAKARTIVDDEMDILEKEFEEELGKSVCSWRRL-

Query:  -----------------DKKQAMKKLEKQELRAQ
                         +KKQA KKLE+QELRAQ
Subjt:  -----------------DKKQAMKKLEKQELRAQ

XP_022978290.1 uncharacterized protein LOC111478320 [Cucurbita maxima]

6.4e-33

63.16

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Query:  NYEALLSYGEDLVAYLKDQNEVQTLNQCLEHFKALRSSCDDDFSNVHSSLQDYEKKIEECRQKTEEAKARTIVDDEMDILEKEFEEELGKSVCSWRRL--
        N E +LSYG+DLVA L DQN+VQTLNQCLEHFK L+SSC DDFSNV SS+QDYEKKIE CRQKTEEAKA T+ DDE+DILEKE  EELGK       +  
Subjt:  NYEALLSYGEDLVAYLKDQNEVQTLNQCLEHFKALRSSCDDDFSNVHSSLQDYEKKIEECRQKTEEAKARTIVDDEMDILEKEFEEELGKSVCSWRRL--

Query:  ----------------DKKQAMKKLEKQELRAQ
                        ++KQAMKKLE+QELR Q
Subjt:  ----------------DKKQAMKKLEKQELRAQ

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CR83 uncharacterized protein LOC111013852 isoform X1

3.7e-34

64.18

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Query:  MNYEALLSYGEDLVAYLKDQNEVQTLNQCLEHFKALRSSCDDDFSNVHSSLQDYEKKIEECRQKTEEAKARTIVDDEMDILEKEFEEELGKSVCSWRRL-
        +N E LLSYG DLVA LKDQ +VQTLNQCLEH KAL+S CDDDFSNVHSS+QDYEKKIE CRQKTEEAKART+ D EMD+LE+E EEEL K       + 
Subjt:  MNYEALLSYGEDLVAYLKDQNEVQTLNQCLEHFKALRSSCDDDFSNVHSSLQDYEKKIEECRQKTEEAKARTIVDDEMDILEKEFEEELGKSVCSWRRL-

Query:  -----------------DKKQAMKKLEKQELRAQ
                         ++KQAMKKLE+QELRAQ
Subjt:  -----------------DKKQAMKKLEKQELRAQ

A0A6J1F034 uncharacterized protein LOC111438184

9.0e-33

63.43

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Query:  MNYEALLSYGEDLVAYLKDQNEVQTLNQCLEHFKALRSSCDDDFSNVHSSLQDYEKKIEECRQKTEEAKARTIVDDEMDILEKEFEEELGKSVCSWRRL-
        MN E LLSYG+DLVA LKDQN+VQTLNQCL+HF AL+SS  DD  NVHSS+QDYEKKIEECR KTEEAKART+ DDEMDILEKE EEE+ +       + 
Subjt:  MNYEALLSYGEDLVAYLKDQNEVQTLNQCLEHFKALRSSCDDDFSNVHSSLQDYEKKIEECRQKTEEAKARTIVDDEMDILEKEFEEELGKSVCSWRRL-

Query:  -----------------DKKQAMKKLEKQELRAQ
                         +KKQA KKLE+QELRAQ
Subjt:  -----------------DKKQAMKKLEKQELRAQ

A0A6J1GFS1 uncharacterized protein LOC111453528

2.0e-32

62.41

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Query:  NYEALLSYGEDLVAYLKDQNEVQTLNQCLEHFKALRSSCDDDFSNVHSSLQDYEKKIEECRQKTEEAKARTIVDDEMDILEKEFEEELGKSVCSWRRL--
        N E LLSYG+DLVA L DQN+VQTLNQCLEHFK L+SSC DDFSNV SS+QDYEKKIE CRQKTEEA+  T+ DDE+DILEKE  EELGK       +  
Subjt:  NYEALLSYGEDLVAYLKDQNEVQTLNQCLEHFKALRSSCDDDFSNVHSSLQDYEKKIEECRQKTEEAKARTIVDDEMDILEKEFEEELGKSVCSWRRL--

Query:  ----------------DKKQAMKKLEKQELRAQ
                        ++KQAMKKLE+QELR Q
Subjt:  ----------------DKKQAMKKLEKQELRAQ

A0A6J1HU69 uncharacterized protein LOC111466216

3.4e-32

63.43

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Query:  MNYEALLSYGEDLVAYLKDQNEVQTLNQCLEHFKALRSSCDDDFSNVHSSLQDYEKKIEECRQKTEEAKARTIVDDEMDILEKEFEEELGKSVCSWRRL-
        MN E LLSYG DLV  LKDQN+VQTLNQCL+HF AL+SSC DDFSNVH  +QDYEKKIEECR KTEEAKART+ DDEMDILEKE EEEL +       + 
Subjt:  MNYEALLSYGEDLVAYLKDQNEVQTLNQCLEHFKALRSSCDDDFSNVHSSLQDYEKKIEECRQKTEEAKARTIVDDEMDILEKEFEEELGKSVCSWRRL-

Query:  -----------------DKKQAMKKLEKQELRAQ
                         ++KQA KKLE+QELRAQ
Subjt:  -----------------DKKQAMKKLEKQELRAQ

A0A6J1IPN8 uncharacterized protein LOC111478320

3.1e-33

63.16

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Query:  NYEALLSYGEDLVAYLKDQNEVQTLNQCLEHFKALRSSCDDDFSNVHSSLQDYEKKIEECRQKTEEAKARTIVDDEMDILEKEFEEELGKSVCSWRRL--
        N E +LSYG+DLVA L DQN+VQTLNQCLEHFK L+SSC DDFSNV SS+QDYEKKIE CRQKTEEAKA T+ DDE+DILEKE  EELGK       +  
Subjt:  NYEALLSYGEDLVAYLKDQNEVQTLNQCLEHFKALRSSCDDDFSNVHSSLQDYEKKIEECRQKTEEAKARTIVDDEMDILEKEFEEELGKSVCSWRRL--

Query:  ----------------DKKQAMKKLEKQELRAQ
                        ++KQAMKKLE+QELR Q
Subjt:  ----------------DKKQAMKKLEKQELRAQ

SwissProt top hits

e value

%identity

Alignment

Q67XT3 Kinetochore protein SPC24 homolog

8.4e-12

39.53

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Query:  EALLSYGEDLVAYLKDQNEVQTLNQCLEHFKALRSSCDDDFSNVHSSLQDYEKKIEECRQKTEEAKARTIVDDEMDILEKEFEEEL
        E L+SYG+DL+  L  +N    ++Q  E FKAL  +C +DF+ +  S++D + K+  C++KTEEA +    +DE++ L+KE +EE+
Subjt:  EALLSYGEDLVAYLKDQNEVQTLNQCLEHFKALRSSCDDDFSNVHSSLQDYEKKIEECRQKTEEAKARTIVDDEMDILEKEFEEEL

Arabidopsis top hits

e value

%identity

Alignment

AT3G08880.1 unknown protein

6.0e-13

39.53

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Query:  EALLSYGEDLVAYLKDQNEVQTLNQCLEHFKALRSSCDDDFSNVHSSLQDYEKKIEECRQKTEEAKARTIVDDEMDILEKEFEEEL
        E L+SYG+DL+  L  +N    ++Q  E FKAL  +C +DF+ +  S++D + K+  C++KTEEA +    +DE++ L+KE +EE+
Subjt:  EALLSYGEDLVAYLKDQNEVQTLNQCLEHFKALRSSCDDDFSNVHSSLQDYEKKIEECRQKTEEAKARTIVDDEMDILEKEFEEEL

AT5G01570.1 unknown protein

1.9e-14

34.43

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Query:  NYEALLSYGEDLVAYLKDQNEVQTLNQCLEHFKALRSSCDDDFSNVHSSLQDYEKKIEECRQKTEEAKARTIVDDEMDILEKEFEEELG-----KSVCSW
        N+E ++S+G++L+  L D+     L Q LE  +A+  SCD+DF  +H SLQD +KK++ C++KT+EA +    ++E++ L+KE +EEL      K    +
Subjt:  NYEALLSYGEDLVAYLKDQNEVQTLNQCLEHFKALRSSCDDDFSNVHSSLQDYEKKIEECRQKTEEAKARTIVDDEMDILEKEFEEELG-----KSVCSW

Query:  RRL--DKKQAMKKLEKQELRAQ
          L  + + A+K+ ++ +LR +
Subjt:  RRL--DKKQAMKKLEKQELRAQ

Sequences

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CDS sequence

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ATGAACTACGAGGCGCTATTATCTTATGGCGAAGATCTGGTGGCTTACTTGAAGGACCAAAATGAGGTTCAAACCTTGAATCAATGCCTCGAACATTTCAAGGCCCTTCG
ATCTTCTTGTGACGATGATTTCAGTAATGTTCACAGTTCACTTCAAGACTATGAGAAGAAAATCGAGGAATGCCGGCAGAAAACAGAGGAGGCGAAAGCGAGAACTATTG
TAGATGATGAAATGGATATTCTCGAAAAGGAGTTCGAAGAGGAACTTGGAAAGAGCGTTTGCTCATGGAGGAGATTAGATAAGAAGCAGGCGATGAAGAAACTTGAGAAA
CAAGAACTTAGGGCGCAGTGA

mRNA sequence

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Protein sequence

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MNYEALLSYGEDLVAYLKDQNEVQTLNQCLEHFKALRSSCDDDFSNVHSSLQDYEKKIEECRQKTEEAKARTIVDDEMDILEKEFEEELGKSVCSWRRLDKKQAMKKLEK
QELRAQ

Lag0012328 (gene) of Sponge gourd (AG-4) v1 genome