; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0012331 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012331
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSingle-stranded DNA-binding protein, mitochondrial
Genome locationchr1:40053128..40055406
RNA-Seq ExpressionLag0012331
SyntenyLag0012331
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF6734224.1 hypothetical protein FQA47_013229 [Oryzias melastigma]4.0e-0931.91Show/hide
Query:  SESRVGRPIIQEDQQANKPI-QQIIKPTG------RSKRSTSQPTDQEDQQVSRPIIQEINKPTD-RSRRSTNRQANRLI-QEINKPTDR-------SRR
        + ++ G P  + DQQ NKP  QQ  +PT       +  + T++PT   ++Q +RP  Q+ ++PT+ ++++ TNRQ N+L  Q+ NKPT++        + 
Subjt:  SESRVGRPIIQEDQQANKPI-QQIIKPTG------RSKRSTSQPTDQEDQQVSRPIIQEINKPTD-RSRRSTNRQANRLI-QEINKPTDR-------SRR

Query:  STSQQADHPRDQQANRPIKKINKSADR----SSRKINKPTS-RSKRSSRQQADHPRRSTSPIDSGIQIQIWRQSQRTQSPESVGRSSKRINKLTSR-SNR
          +QQ + P ++Q NRP K  N+  +R    ++R+ N+PT+ ++ R + QQ D P   T P D     Q   ++++T  P    R + R  K T+R +NR
Subjt:  STSQQADHPRDQQANRPIKKINKSADR----SSRKINKPTS-RSKRSSRQQADHPRRSTSPIDSGIQIQIWRQSQRTQSPESVGRSSKRINKLTSR-SNR

Query:  SSSQQAD-PRDQQANRPIKKINKSAGRSSKRSTSQPTDQEDQQVSRPIIQEDQQANK
         ++QQ D P +QQ N+P  + N+   R  K  T + T+Q+  +  +P  +++QQ  K
Subjt:  SSSQQAD-PRDQQANRPIKKINKSAGRSSKRSTSQPTDQEDQQVSRPIIQEDQQANK
RUS92128.1 hypothetical protein EGW08_000152 [Elysia chlorotica]4.1e-0640Show/hide
Query:  SESRVGRPIIQEDQQANKPI-QQIIKPTGRSKRSTSQPTDQE-----DQQVSRPIIQEINKPTD-RSRRSTNRQANRLI-QEINKPTD-RSRRSTSQQAD
        ++ R  RP     QQ N+P  QQ  +PTG   + T++P DQ+     DQQ +RP  Q+ N+PTD ++ R T++QANR   Q+ N+PTD ++ R T QQ  
Subjt:  SESRVGRPIIQEDQQANKPI-QQIIKPTGRSKRSTSQPTDQE-----DQQVSRPIIQEINKPTD-RSRRSTNRQANRLI-QEINKPTD-RSRRSTSQQAD

Query:  HPRDQQANRPI-KKINKSADRSSRKINKPT-SRSKRSSRQQADHP
         P DQQ NRP  ++ N+ AD+ +   N+PT  ++ R + QQ + P
Subjt:  HPRDQQANRPI-KKINKSADRSSRKINKPT-SRSKRSSRQQADHP
TrEMBL top hitse value%identityAlignment
A0A433UEB9 Uncharacterized protein2.0e-0640Show/hide
Query:  SESRVGRPIIQEDQQANKPI-QQIIKPTGRSKRSTSQPTDQE-----DQQVSRPIIQEINKPTD-RSRRSTNRQANRLI-QEINKPTD-RSRRSTSQQAD
        ++ R  RP     QQ N+P  QQ  +PTG   + T++P DQ+     DQQ +RP  Q+ N+PTD ++ R T++QANR   Q+ N+PTD ++ R T QQ  
Subjt:  SESRVGRPIIQEDQQANKPI-QQIIKPTGRSKRSTSQPTDQE-----DQQVSRPIIQEINKPTD-RSRRSTNRQANRLI-QEINKPTD-RSRRSTSQQAD

Query:  HPRDQQANRPI-KKINKSADRSSRKINKPT-SRSKRSSRQQADHP
         P DQQ NRP  ++ N+ AD+ +   N+PT  ++ R + QQ + P
Subjt:  HPRDQQANRPI-KKINKSADRSSRKINKPT-SRSKRSSRQQADHP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAATTCAGGTACTACATCTCTTGAAGAGACGGTTTGTGCCAGATTCAGGGATTCAGATTCAGATTTGGAGACAGAGTCAGAGAACTCAGAGTCCAGAGTCGGTAG
GCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAAC
AAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAATCGTCAAGCCAACAGGCTGATCCAAGAGATCAACAAGCCAACCGAC
CGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAAATCAACAAGTCAGCAGACCGATCATCTAGGAAGATCAA
CAAGCCAACAAGCCGATCCAAGAGATCATCACGCCAACAGGCCGATCATCCAAGAAGATCAACAAGCCCAATAGATTCGGGGATTCAGATTCAGATTTGGAGACAGAGTC
AGAGAACTCAGAGTCCAGAGTCGGTAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCAACAA
GCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCA
AGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCGTCAAGCCAACAGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAATTCAGGTACTACATCTCTTGAAGAGACGGTTTGTGCCAGATTCAGGGATTCAGATTCAGATTTGGAGACAGAGTCAGAGAACTCAGAGTCCAGAGTCGGTAG
GCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAAC
AAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAATCGTCAAGCCAACAGGCTGATCCAAGAGATCAACAAGCCAACCGAC
CGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAAATCAACAAGTCAGCAGACCGATCATCTAGGAAGATCAA
CAAGCCAACAAGCCGATCCAAGAGATCATCACGCCAACAGGCCGATCATCCAAGAAGATCAACAAGCCCAATAGATTCGGGGATTCAGATTCAGATTTGGAGACAGAGTC
AGAGAACTCAGAGTCCAGAGTCGGTAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCAACAA
GCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCA
AGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCGTCAAGCCAACAGGCTGA
Protein sequenceShow/hide protein sequence
MENSGTTSLEETVCARFRDSDSDLETESENSESRVGRPIIQEDQQANKPIQQIIKPTGRSKRSTSQPTDQEDQQVSRPIIQEINKPTDRSRRSTNRQANRLIQEINKPTD
RSRRSTSQQADHPRDQQANRPIKKINKSADRSSRKINKPTSRSKRSSRQQADHPRRSTSPIDSGIQIQIWRQSQRTQSPESVGRSSKRINKLTSRSNRSSSQQADPRDQQ
ANRPIKKINKSAGRSSKRSTSQPTDQEDQQVSRPIIQEDQQANKPIQQIVKPTG