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Lag0012373 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012373
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description30S ribosomal protein S31, chloroplastic
Genome locationchr1:40532511..40533305
RNA-Seq ExpressionLag0012373
SyntenyLag0012373
Gene Ontology termsGO:0032544 - plastid translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR030826 - 30S ribosomal protein
IPR044695 - 30S ribosomal protein S31, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008449316.1 PREDICTED: 30S ribosomal protein S31, chloroplastic [Cucumis melo]1.1e-4787.6Show/hide
Query:  MASLPFGILQAASQSPTLAPCFFSFSKSETLGKSLH-SSTASLAISATSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPSPPSPP
        M SLPFG+LQA SQSP+L P +FSFSKSETLG SL  SSTASLAIS  SSPSSIPAVYCGRGDKKTE+GKRFNHSYGNARPRDKTKGRGTPRVP+PPSPP
Subjt:  MASLPFGILQAASQSPTLAPCFFSFSKSETLGKSLH-SSTASLAISATSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPSPPSPP

Query:  RKDKFDDDEKIKIEIDESLFS
        RKDKFDDDEKIKIEIDESLF+
Subjt:  RKDKFDDDEKIKIEIDESLFS

XP_022151467.1 30S ribosomal protein S31, chloroplastic [Momordica charantia]1.4e-5089.17Show/hide
Query:  MASLPFGILQAASQSPTLAPCFFSFSKSETLGKSLHSSTASLAISATSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPSPPSPPR
        MASLPFG+LQAASQSPTL+P FFSFSKSETLG SL +STASLA SATSSPSS+PAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVP+PP+PPR
Subjt:  MASLPFGILQAASQSPTLAPCFFSFSKSETLGKSLHSSTASLAISATSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPSPPSPPR

Query:  KDKFDDDEKIKIEIDESLFS
        KDKF+DDEKIKIEID+SLF+
Subjt:  KDKFDDDEKIKIEIDESLFS

XP_022931892.1 30S ribosomal protein S31, chloroplastic-like [Cucurbita moschata]1.1e-4585.83Show/hide
Query:  MASLPFGILQAASQSPTLAPCFFSFSKSETLGKSLHSSTASLAISATSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPSPPSPPR
        MASLPFG+LQA  QSPTL+P  FSFSKSETLG SL +ST +   SATSSPSSIPAVYCGRGDKKTEKGKRF HS+GNARPRDKTKGRGTPRVP+PPSPPR
Subjt:  MASLPFGILQAASQSPTLAPCFFSFSKSETLGKSLHSSTASLAISATSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPSPPSPPR

Query:  KDKFDDDEKIKIEIDESLFS
        KDKFDDDEKIKIEIDESLFS
Subjt:  KDKFDDDEKIKIEIDESLFS

XP_023517799.1 30S ribosomal protein S31, chloroplastic [Cucurbita pepo subsp. pepo]3.7e-4686.67Show/hide
Query:  MASLPFGILQAASQSPTLAPCFFSFSKSETLGKSLHSSTASLAISATSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPSPPSPPR
        MASLPFG+LQA  QSPTL+P  FSFSKSETLG SL +ST    ISATSSPSSIPAVYCGRGDKKTEKGKRF HS+GNARPRDKTKGRGTPRVP+PPSPPR
Subjt:  MASLPFGILQAASQSPTLAPCFFSFSKSETLGKSLHSSTASLAISATSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPSPPSPPR

Query:  KDKFDDDEKIKIEIDESLFS
        KDKFDDDEKIKIEIDESLFS
Subjt:  KDKFDDDEKIKIEIDESLFS

XP_038882305.1 30S ribosomal protein S31, chloroplastic [Benincasa hispida]2.3e-4889.26Show/hide
Query:  MASLPFGILQAASQSPTLAPCFFSFSKSETLGKSLH-SSTASLAISATSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPSPPSPP
        MASLPFG+LQAASQSPTL+P FFSFSKSETLG SL  SSTASLA S TSSPSSIPAVYCGRGDKKTEKGKRFN SYGNARPR+KTKGRGTPRVP+PPSPP
Subjt:  MASLPFGILQAASQSPTLAPCFFSFSKSETLGKSLH-SSTASLAISATSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPSPPSPP

Query:  RKDKFDDDEKIKIEIDESLFS
        RKDKF+DDEKIKIEIDESLF+
Subjt:  RKDKFDDDEKIKIEIDESLFS

TrEMBL top hitse value%identityAlignment
A0A1S3BL51 30S ribosomal protein S31, chloroplastic5.6e-4887.6Show/hide
Query:  MASLPFGILQAASQSPTLAPCFFSFSKSETLGKSLH-SSTASLAISATSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPSPPSPP
        M SLPFG+LQA SQSP+L P +FSFSKSETLG SL  SSTASLAIS  SSPSSIPAVYCGRGDKKTE+GKRFNHSYGNARPRDKTKGRGTPRVP+PPSPP
Subjt:  MASLPFGILQAASQSPTLAPCFFSFSKSETLGKSLH-SSTASLAISATSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPSPPSPP

Query:  RKDKFDDDEKIKIEIDESLFS
        RKDKFDDDEKIKIEIDESLF+
Subjt:  RKDKFDDDEKIKIEIDESLFS

A0A5A7TU27 30S ribosomal protein S315.6e-4887.6Show/hide
Query:  MASLPFGILQAASQSPTLAPCFFSFSKSETLGKSLH-SSTASLAISATSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPSPPSPP
        M SLPFG+LQA SQSP+L P +FSFSKSETLG SL  SSTASLAIS  SSPSSIPAVYCGRGDKKTE+GKRFNHSYGNARPRDKTKGRGTPRVP+PPSPP
Subjt:  MASLPFGILQAASQSPTLAPCFFSFSKSETLGKSLH-SSTASLAISATSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPSPPSPP

Query:  RKDKFDDDEKIKIEIDESLFS
        RKDKFDDDEKIKIEIDESLF+
Subjt:  RKDKFDDDEKIKIEIDESLFS

A0A6J1DDL3 30S ribosomal protein S31, chloroplastic7.0e-5189.17Show/hide
Query:  MASLPFGILQAASQSPTLAPCFFSFSKSETLGKSLHSSTASLAISATSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPSPPSPPR
        MASLPFG+LQAASQSPTL+P FFSFSKSETLG SL +STASLA SATSSPSS+PAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVP+PP+PPR
Subjt:  MASLPFGILQAASQSPTLAPCFFSFSKSETLGKSLHSSTASLAISATSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPSPPSPPR

Query:  KDKFDDDEKIKIEIDESLFS
        KDKF+DDEKIKIEID+SLF+
Subjt:  KDKFDDDEKIKIEIDESLFS

A0A6J1EV33 30S ribosomal protein S31, chloroplastic-like5.2e-4685.83Show/hide
Query:  MASLPFGILQAASQSPTLAPCFFSFSKSETLGKSLHSSTASLAISATSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPSPPSPPR
        MASLPFG+LQA  QSPTL+P  FSFSKSETLG SL +ST +   SATSSPSSIPAVYCGRGDKKTEKGKRF HS+GNARPRDKTKGRGTPRVP+PPSPPR
Subjt:  MASLPFGILQAASQSPTLAPCFFSFSKSETLGKSLHSSTASLAISATSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPSPPSPPR

Query:  KDKFDDDEKIKIEIDESLFS
        KDKFDDDEKIKIEIDESLFS
Subjt:  KDKFDDDEKIKIEIDESLFS

A0A6J1HRX4 30S ribosomal protein S31, chloroplastic5.2e-4685.83Show/hide
Query:  MASLPFGILQAASQSPTLAPCFFSFSKSETLGKSLHSSTASLAISATSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPSPPSPPR
        MASLPFG+LQA  QSPTL+P  FSFSKSETLG SL +ST +   SATSSPSSIPAVYCGRGDKKTEKGKRF HS+GNARPRDKTKGRGTPRVP+PPSPPR
Subjt:  MASLPFGILQAASQSPTLAPCFFSFSKSETLGKSLHSSTASLAISATSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPSPPSPPR

Query:  KDKFDDDEKIKIEIDESLFS
        KDKFDDDEKIKIEIDESLFS
Subjt:  KDKFDDDEKIKIEIDESLFS

SwissProt top hitse value%identityAlignment
O80439 30S ribosomal protein S31, chloroplastic3.3e-2972.16Show/hide
Query:  SFSKSETLGKSLHSSTASLAISATSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPSPPSPPRKDKFDDDEKIKIEIDESLFS
        S S SET G SL   T   ++S TSS SSIP VYCGRGD+KT KGKRFNHS+GNARPR+K+KGRG  RVP PP+PPRKDKF++DEKIKI+IDESLFS
Subjt:  SFSKSETLGKSLHSSTASLAISATSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPSPPSPPRKDKFDDDEKIKIEIDESLFS

P47909 30S ribosomal protein S31, mitochondrial9.6e-0563.04Show/hide
Query:  AVYCGRGDKKTEKGKRFNHSYGNARP-RDKTKGRGTPRVPSPPSPP
        AV CGRGDKKT++GKRF  SYGNARP R+K   R   RV  P S P
Subjt:  AVYCGRGDKKTEKGKRFNHSYGNARP-RDKTKGRGTPRVPSPPSPP

P47910 30S ribosomal protein S31, chloroplastic3.0e-1450.47Show/hide
Query:  MASLPFGILQAASQSPTLAPCFFSFSKSETL-GKSLHS-STASLAISATSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPSPPSP
        MASL  G    A  S +     FSFS S+++ G SL S  T SL+ S ++SP ++P +YCGRGD+KT KGKRFNHS+GNARP++K KGRG P+ P  P  
Subjt:  MASLPFGILQAASQSPTLAPCFFSFSKSETL-GKSLHS-STASLAISATSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPSPPSP

Query:  PRKDKFD
            K D
Subjt:  PRKDKFD

Arabidopsis top hitse value%identityAlignment
AT2G38140.1 plastid-specific ribosomal protein 42.3e-3072.16Show/hide
Query:  SFSKSETLGKSLHSSTASLAISATSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPSPPSPPRKDKFDDDEKIKIEIDESLFS
        S S SET G SL   T   ++S TSS SSIP VYCGRGD+KT KGKRFNHS+GNARPR+K+KGRG  RVP PP+PPRKDKF++DEKIKI+IDESLFS
Subjt:  SFSKSETLGKSLHSSTASLAISATSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPSPPSPPRKDKFDDDEKIKIEIDESLFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCACTTCCTTTCGGAATTCTTCAGGCCGCGTCTCAATCTCCAACTCTTGCTCCATGTTTTTTCTCTTTCTCCAAATCCGAAACCCTAGGAAAATCTCTGCATTC
ATCTACTGCTTCTCTTGCAATCTCTGCAACTTCGTCGCCTTCTTCAATTCCCGCTGTGTATTGTGGCCGAGGCGATAAGAAAACGGAGAAAGGAAAGCGATTCAATCACT
CATACGGAAATGCAAGGCCTCGGGACAAGACGAAAGGGAGAGGGACTCCGAGAGTACCAAGTCCTCCTTCTCCGCCTAGGAAGGATAAATTTGACGACGATGAGAAAATT
AAGATCGAGATTGACGAGTCTCTTTTCTCTATCTACTGGAAGTATGCTCTCTCTGTCTCTTGCTTTTTAACCATTTCTGAGCTAGACTTGACTACTGGTGCTTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCACTTCCTTTCGGAATTCTTCAGGCCGCGTCTCAATCTCCAACTCTTGCTCCATGTTTTTTCTCTTTCTCCAAATCCGAAACCCTAGGAAAATCTCTGCATTC
ATCTACTGCTTCTCTTGCAATCTCTGCAACTTCGTCGCCTTCTTCAATTCCCGCTGTGTATTGTGGCCGAGGCGATAAGAAAACGGAGAAAGGAAAGCGATTCAATCACT
CATACGGAAATGCAAGGCCTCGGGACAAGACGAAAGGGAGAGGGACTCCGAGAGTACCAAGTCCTCCTTCTCCGCCTAGGAAGGATAAATTTGACGACGATGAGAAAATT
AAGATCGAGATTGACGAGTCTCTTTTCTCTATCTACTGGAAGTATGCTCTCTCTGTCTCTTGCTTTTTAACCATTTCTGAGCTAGACTTGACTACTGGTGCTTCATAG
Protein sequenceShow/hide protein sequence
MASLPFGILQAASQSPTLAPCFFSFSKSETLGKSLHSSTASLAISATSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPSPPSPPRKDKFDDDEKI
KIEIDESLFSIYWKYALSVSCFLTISELDLTTGAS