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Lag0012379 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012379
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein yippee-like
Genome locationchr1:40562190..40562904
RNA-Seq ExpressionLag0012379
SyntenyLag0012379
Gene Ontology termsGO:0000151 - ubiquitin ligase complex (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR004910 - Yippee/Mis18/Cereblon
IPR034751 - Yippee domain
IPR039058 - Yippee family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045036.1 protein yippee-like [Cucumis melo var. makuwa]4.9e-3892.86Show/hide
Query:  GSVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDDA
        G VNV+VGEQEERMMITGLHTVVDIFCVGCGSI+GWKYEVAYDKSQKYKEGKYILEMFKVLGPDG+ YLASHDPQL GSDGDDA
Subjt:  GSVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDDA

XP_004147886.1 protein yippee-like [Cucumis sativus]4.6e-3693.75Show/hide
Query:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGD
        VNVTVGEQEERMMITGLHTVVDIFCVGCGSI+GWKYEVAYDKSQKYKEGKYILEMFKVL PDG+ YLASHDPQL GSDGD
Subjt:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGD

XP_016900459.1 PREDICTED: LOW QUALITY PROTEIN: protein yippee-like [Cucumis melo]2.4e-3793.9Show/hide
Query:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDDA
        VNV+VGEQEERMMITGLHTVVDIFCVGCGSI+GWKYEVAYDKSQKYKEGKYILEMFKVLGPDG+ YLASHDPQL GSDGDDA
Subjt:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDDA

XP_023543326.1 protein yippee-like [Cucurbita pepo subsp. pepo]6.0e-3691.46Show/hide
Query:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDDA
        VNVTVGE E+RM+ITGLHTVVDIFCVGCGSILGWKYE+A+DKSQKYKEGKYILEM KVLGPDG+SYLASHDPQLAGSDGDDA
Subjt:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDDA

XP_038883190.1 protein yippee-like [Benincasa hispida]5.8e-3998.78Show/hide
Query:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDDA
        VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDG+SYLASHDPQLAGSDGDDA
Subjt:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDDA

TrEMBL top hitse value%identityAlignment
A0A0A0L2L2 Protein yippee-like2.2e-3693.75Show/hide
Query:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGD
        VNVTVGEQEERMMITGLHTVVDIFCVGCGSI+GWKYEVAYDKSQKYKEGKYILEMFKVL PDG+ YLASHDPQL GSDGD
Subjt:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGD

A0A1S4DWV3 Protein yippee-like1.2e-3793.9Show/hide
Query:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDDA
        VNV+VGEQEERMMITGLHTVVDIFCVGCGSI+GWKYEVAYDKSQKYKEGKYILEMFKVLGPDG+ YLASHDPQL GSDGDDA
Subjt:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDDA

A0A5D3B8V7 Protein yippee-like2.4e-3892.86Show/hide
Query:  GSVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDDA
        G VNV+VGEQEERMMITGLHTVVDIFCVGCGSI+GWKYEVAYDKSQKYKEGKYILEMFKVLGPDG+ YLASHDPQL GSDGDDA
Subjt:  GSVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDDA

A0A6J1DDY1 Protein yippee-like1.4e-3590.24Show/hide
Query:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDDA
        VNVT+GEQEERMMITGLHTVVDIFCVGCGSILGWKY+ AYDKSQKYKEGK+ILEMFKVL PDGS Y+ASHD QLAGSDGDDA
Subjt:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDDA

A0A6J1GG37 Protein yippee-like2.9e-3691.46Show/hide
Query:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDDA
        VNVTVGE E+RM+ITGLHTVVDIFCVGCGSILGWKYE+A+DKSQKYKEGKYILEM KVLGPDG+SYLASHDPQLAGSDGDDA
Subjt:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDDA

SwissProt top hitse value%identityAlignment
P59234 Protein yippee-like3.3e-2972.84Show/hide
Query:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDD
        VNVT GE E RMM+TG+HTV DIFCV CGSI+GWKYE A++KSQKYKEGK +LE FK+ GPDGS Y ASHD  +AGSD DD
Subjt:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDD

Q9C777 Protein yippee-like At3g112302.4e-2459.76Show/hide
Query:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDDA
        VNV  G++E+RMM+TG+HTVVDI+CV CGS +GWKYE A++K+QKYKEGK +LE +KV GPDG++Y  + + +   SD DDA
Subjt:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDDA

Q9FN32 Protein yippee-like At5g539405.5e-1646.99Show/hide
Query:  SVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDDA
        SVN+++G  EER+M++G+HTV DIFC  CG  +GWKYE A++K+QKYKEGK++LE  +++     S     D   + SD +D+
Subjt:  SVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDDA

Q9LY56 Protein yippee-like At3g558904.2e-2465.85Show/hide
Query:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDDA
        VNV+VGE+E+RMMITGLH VVDIFCVGCGS +GWKYE A++KSQKYKEGK +LE++K+ GP        HD     SDGDDA
Subjt:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDDA

Q9SR97 Protein yippee-like At3g089904.0e-2767.9Show/hide
Query:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDD
        VNVTVGE+E R+MITG HTV DIFCV CGS++GWKYE+AYDKSQKYKEGK+ILE FKVLGP G  Y  + +  + GSD ++
Subjt:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDD

Arabidopsis top hitse value%identityAlignment
AT2G40110.1 Yippee family putative zinc-binding protein4.9e-2865.85Show/hide
Query:  NVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSY-LASHDPQLAGSDGDDA
        NV++GE EER+M+TG HTV DIFCV CGSI+GWKYE A++K+QKYKEGK +LE FK+ GPDGS+Y ++SH   + GSD DDA
Subjt:  NVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSY-LASHDPQLAGSDGDDA

AT3G08990.1 Yippee family putative zinc-binding protein2.9e-2867.9Show/hide
Query:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDD
        VNVTVGE+E R+MITG HTV DIFCV CGS++GWKYE+AYDKSQKYKEGK+ILE FKVLGP G  Y  + +  + GSD ++
Subjt:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDD

AT3G08990.2 Yippee family putative zinc-binding protein2.9e-2867.9Show/hide
Query:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDD
        VNVTVGE+E R+MITG HTV DIFCV CGS++GWKYE+AYDKSQKYKEGK+ILE FKVLGP G  Y  + +  + GSD ++
Subjt:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDD

AT3G11230.1 Yippee family putative zinc-binding protein1.7e-2559.76Show/hide
Query:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDDA
        VNV  G++E+RMM+TG+HTVVDI+CV CGS +GWKYE A++K+QKYKEGK +LE +KV GPDG++Y  + + +   SD DDA
Subjt:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDDA

AT3G11230.2 Yippee family putative zinc-binding protein1.7e-2559.76Show/hide
Query:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDDA
        VNV  G++E+RMM+TG+HTVVDI+CV CGS +GWKYE A++K+QKYKEGK +LE +KV GPDG++Y  + + +   SD DDA
Subjt:  VNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGGCAGTGTAAATGTCACAGTTGGAGAACAAGAAGAGCGGATGATGATCACGGGATTGCACACTGTTGTTGACATATTTTGTGTTGGTTGTGGCTCAATT
CTTGGTTGGAAATATGAGGTTGCCTATGACAAATCCCAAAAGTACAAGGAAGGGAAATATATCCTTGAAATGTTCAAAGTCTTGGGTCCTGATGGAAGCAGCTAC
TTAGCAAGTCATGATCCGCAGCTTGCAGGAAGCGATGGCGACGATGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATGGCAGTGTAAATGTCACAGTTGGAGAACAAGAAGAGCGGATGATGATCACGGGATTGCACACTGTTGTTGACATATTTTGTGTTGGTTGTGGCTCAATT
CTTGGTTGGAAATATGAGGTTGCCTATGACAAATCCCAAAAGTACAAGGAAGGGAAATATATCCTTGAAATGTTCAAAGTCTTGGGTCCTGATGGAAGCAGCTAC
TTAGCAAGTCATGATCCGCAGCTTGCAGGAAGCGATGGCGACGATGCTTGA
Protein sequenceShow/hide protein sequence
MHGSVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGSSYLASHDPQLAGSDGDDA