; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0012380 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012380
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationchr1:40570178..40572409
RNA-Seq ExpressionLag0012380
SyntenyLag0012380
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147887.1 chlorophyll a-b binding protein CP29.1, chloroplastic [Cucumis sativus]4.4e-15495.76Show/hide
Query:  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSF+GTRLA++ PSSGRVQARF FGKKKSP KKSPSSK ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
        GDIIGTRFES+EVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR

Query:  NSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSS
        N+ELDPEKRLYPGGK+FDPLGLAEDPEKKA+LQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIID FSS
Subjt:  NSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSS

XP_008449241.1 PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucumis melo]4.4e-15495.76Show/hide
Query:  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSFIGTRLA++ PSSGRVQARF FGKKKSP KKSPSSK ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
        GDIIGTRFES+EVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR

Query:  NSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSS
        N+ELDPEKRLYPGGK+FDPLGLAEDPEKKA+LQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIID FSS
Subjt:  NSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSS

XP_022151483.1 chlorophyll a-b binding protein CP29.1, chloroplastic [Momordica charantia]4.4e-15495.82Show/hide
Query:  AATATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
        AATATAAATSSFIGTRL DVRPSSGRVQARFSFGKKK+  KK  SSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
Subjt:  AATATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK

Query:  NVAGDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIE
        NVAGDIIGTRFE+S+VKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIE
Subjt:  NVAGDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIE

Query:  FQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSSS
        FQRN+ELDPEKRLYPGGK+FDPLGLAEDPEKKA+LQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIID+FSSS
Subjt:  FQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSSS

XP_022966541.1 chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita maxima]2.0e-15495.42Show/hide
Query:  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        AT+AATSSFIGTRLADVR SSGRVQARFSFGKKKSPAKKSPSSKQI DRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
        GD+IGTRFE+SEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGAL+VEWLTGVTWQDAGKVELVEGSSYLGQPLPFS+T LIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR

Query:  NSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSSS
        N+EL+PEKRLYPGGK+FDPLGLAEDPEKKA+LQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIID FSSS
Subjt:  NSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSSS

XP_038882769.1 chlorophyll a-b binding protein CP29.1, chloroplastic-like [Benincasa hispida]4.4e-15495.76Show/hide
Query:  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSFIGTRLA++RP SGRVQARF FGKKKSP KKSPSSK ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
        GDIIGTRFES+EVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR

Query:  NSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSS
        N+ELDPEKRLYPGGK+FDPLGLAEDPEKK +LQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIID FSS
Subjt:  NSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSS

TrEMBL top hitse value%identityAlignment
A0A0A0KXI3 Chlorophyll a-b binding protein, chloroplastic2.1e-15495.76Show/hide
Query:  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSF+GTRLA++ PSSGRVQARF FGKKKSP KKSPSSK ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
        GDIIGTRFES+EVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR

Query:  NSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSS
        N+ELDPEKRLYPGGK+FDPLGLAEDPEKKA+LQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIID FSS
Subjt:  NSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSS

A0A1S3BMH8 Chlorophyll a-b binding protein, chloroplastic2.1e-15495.76Show/hide
Query:  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSFIGTRLA++ PSSGRVQARF FGKKKSP KKSPSSK ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
        GDIIGTRFES+EVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR

Query:  NSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSS
        N+ELDPEKRLYPGGK+FDPLGLAEDPEKKA+LQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIID FSS
Subjt:  NSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSS

A0A5D3BBB3 Chlorophyll a-b binding protein, chloroplastic2.1e-15495.76Show/hide
Query:  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSFIGTRLA++ PSSGRVQARF FGKKKSP KKSPSSK ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
        GDIIGTRFES+EVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR

Query:  NSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSS
        N+ELDPEKRLYPGGK+FDPLGLAEDPEKKA+LQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIID FSS
Subjt:  NSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSS

A0A6J1DCA5 Chlorophyll a-b binding protein, chloroplastic2.1e-15495.82Show/hide
Query:  AATATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
        AATATAAATSSFIGTRL DVRPSSGRVQARFSFGKKK+  KK  SSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
Subjt:  AATATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK

Query:  NVAGDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIE
        NVAGDIIGTRFE+S+VKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIE
Subjt:  NVAGDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIE

Query:  FQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSSS
        FQRN+ELDPEKRLYPGGK+FDPLGLAEDPEKKA+LQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIID+FSSS
Subjt:  FQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSSS

A0A6J1HPL7 Chlorophyll a-b binding protein, chloroplastic9.5e-15595.42Show/hide
Query:  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        AT+AATSSFIGTRLADVR SSGRVQARFSFGKKKSPAKKSPSSKQI DRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
        GD+IGTRFE+SEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGAL+VEWLTGVTWQDAGKVELVEGSSYLGQPLPFS+T LIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR

Query:  NSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSSS
        N+EL+PEKRLYPGGK+FDPLGLAEDPEKKA+LQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIID FSSS
Subjt:  NSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSSS

SwissProt top hitse value%identityAlignment
Q01667 Chlorophyll a-b binding protein 6, chloroplastic1.2e-3737.86Show/hide
Query:  ATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGK-PAEYLQYDLDSLDQNLAKNVAGDI
        A++S +   +A V PS     ++  F     P   + +  +I     W PG   P +LDGS  GD+GFDP GLG+ PA                      
Subjt:  ATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGK-PAEYLQYDLDSLDQNLAKNVAGDI

Query:  IGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEG--SSYLGQPLPF-SITTLIWIEVLVIGYIEFQR
                               L+R++E ELIH RWAMLA  G L  E L    W  A +   + G  ++YLG P+P+ ++ T++ IE L I ++E QR
Subjt:  IGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEG--SSYLGQPLPF-SITTLIWIEVLVIGYIEFQR

Query:  NSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAV-QAAVTGKGPLNNWATHLSDPLHTTIID
        + E DPEK+ YPGG  FDPLG ++DP+K   L++ EIK+ RLA++AF+GF V Q+A  G GPL N ATHL+DP H  I D
Subjt:  NSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAV-QAAVTGKGPLNNWATHLSDPLHTTIID

Q07473 Chlorophyll a-b binding protein CP29.1, chloroplastic3.9e-13783.1Show/hide
Query:  MAAT-ATAAATSSFIGTRLA-DVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQN
        MAAT A AAA SS +GTR+A  + P SGR  A F FGKKK+  KKS      +DRPLW+PGA +P+WLDGSLVGDYGFDPFGLGKPAEYLQ+D+DSLDQN
Subjt:  MAAT-ATAAATSSFIGTRLA-DVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQN

Query:  LAKNVAGDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIG
        LAKN+AGD+IGTR E+++ KSTPFQPY+EVFG+QRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELV+GSSYLGQPLPFSI+TLIWIEVLVIG
Subjt:  LAKNVAGDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIG

Query:  YIEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSSS
        YIEFQRN+ELD EKRLYPGGK+FDPLGLA DPEK A LQLAEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIIDTFSSS
Subjt:  YIEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSSS

Q93WD2 Chlorophyll a-b binding protein CP291.4e-6560.27Show/hide
Query:  LWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIG-TRFESSEVKS-TPFQPYTEVFGLQRFRECELIHGRWAMLATLGA
        LW P    PEWLDGSL GD GFDP GL KP+E++   +D  DQN AKN  G +    +    EV S     PY+EVFGL RFRECELIHGRWAMLA LGA
Subjt:  LWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIG-TRFESSEVKS-TPFQPYTEVFGLQRFRECELIHGRWAMLATLGA

Query:  LSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAI-LQLAEIKHARLAMVAF
        L  E  TGV+W +AGKVEL +G+SY G  LPFSIT LIWIEV+++G  EF RNSE +PEKR YPGG  FDPL LA + E++A  L+ AEIKHARLAMV+F
Subjt:  LSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAI-LQLAEIKHARLAMVAF

Query:  LGFAVQAAVTGKGPLNNWA
         G+ VQA  TG+G L + A
Subjt:  LGFAVQAAVTGKGPLNNWA

Q9S7W1 Chlorophyll a-b binding protein CP29.3, chloroplastic1.1e-11577.29Show/hide
Query:  ATATAAATSSFIGTRLADVRPSSGRVQAR--FSFGKKK--SPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQN
        AT TAAA S   G R+ D RP +GRVQAR  FSFGKKK   P KKS   +   DR +WFPGA  PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQN
Subjt:  ATATAAATSSFIGTRLADVRPSSGRVQAR--FSFGKKK--SPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQN

Query:  LAKNVAGDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIG
        LAKNVAGDIIG   ESSE+K TPFQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTG+ WQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLV+G
Subjt:  LAKNVAGDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIG

Query:  YIEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWAT
        YIEFQRNSELDPEKR+YPGG YFDPLGLA DPEK   L+LAEIKH+RLAMVAFL FA+QAA TGKGP++  AT
Subjt:  YIEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWAT

Q9XF88 Chlorophyll a-b binding protein CP29.2, chloroplastic1.6e-13582.7Show/hide
Query:  MAATATAAATSSFIGTR-LADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNL
        MAAT+TAAA SS +GTR ++D+  +S R  ARF FG KK+  KK+ +   ISDRPLWFPGAK+PE+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNL
Subjt:  MAATATAAATSSFIGTR-LADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNL

Query:  AKNVAGDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGY
        AKN+ G++IGTR E+ + KSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGA++VEWLTGVTWQDAGKVELV+GSSYLGQPLPFSI+TLIWIEVLVIGY
Subjt:  AKNVAGDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGY

Query:  IEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSSS
        IEFQRN+ELD EKRLYPGGK+FDPLGLA DP KKA LQLAEIKHARLAMV FLGFAVQAA TGKGPLNNWATHLSDPLHTTIIDTFSSS
Subjt:  IEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSSS

Arabidopsis top hitse value%identityAlignment
AT2G40100.1 light harvesting complex photosystem II7.8e-11777.29Show/hide
Query:  ATATAAATSSFIGTRLADVRPSSGRVQAR--FSFGKKK--SPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQN
        AT TAAA S   G R+ D RP +GRVQAR  FSFGKKK   P KKS   +   DR +WFPGA  PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQN
Subjt:  ATATAAATSSFIGTRLADVRPSSGRVQAR--FSFGKKK--SPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQN

Query:  LAKNVAGDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIG
        LAKNVAGDIIG   ESSE+K TPFQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTG+ WQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLV+G
Subjt:  LAKNVAGDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIG

Query:  YIEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWAT
        YIEFQRNSELDPEKR+YPGG YFDPLGLA DPEK   L+LAEIKH+RLAMVAFL FA+QAA TGKGP++  AT
Subjt:  YIEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWAT

AT2G40100.2 light harvesting complex photosystem II1.1e-6773.84Show/hide
Query:  ATATAAATSSFIGTRLADVRPSSGRVQAR--FSFGKKK--SPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQN
        AT TAAA S   G R+ D RP +GRVQAR  FSFGKKK   P KKS   +   DR +WFPGA  PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQN
Subjt:  ATATAAATSSFIGTRLADVRPSSGRVQAR--FSFGKKK--SPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQN

Query:  LAKNVAGDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVE
        LAKNVAGDIIG   ESSE+K TPFQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTG+ WQDAGKVE
Subjt:  LAKNVAGDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVE

AT3G08940.1 light harvesting complex photosystem II1.3e-7172.97Show/hide
Query:  MAATATAAATSSFIGTR-LADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNL
        MAAT+TAAA SS +GTR ++D+  +S R  ARF FG KK+  KK+ +   ISDRPLWFPGAK+PE+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNL
Subjt:  MAATATAAATSSFIGTR-LADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNL

Query:  AKNVAGDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF
        AKN+ G++IGTR E+ + KSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGA++VEWLTGVTWQDAGKV  +  SS L   L F
Subjt:  AKNVAGDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF

AT3G08940.2 light harvesting complex photosystem II1.2e-13682.7Show/hide
Query:  MAATATAAATSSFIGTR-LADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNL
        MAAT+TAAA SS +GTR ++D+  +S R  ARF FG KK+  KK+ +   ISDRPLWFPGAK+PE+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNL
Subjt:  MAATATAAATSSFIGTR-LADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNL

Query:  AKNVAGDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGY
        AKN+ G++IGTR E+ + KSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGA++VEWLTGVTWQDAGKVELV+GSSYLGQPLPFSI+TLIWIEVLVIGY
Subjt:  AKNVAGDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGY

Query:  IEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSSS
        IEFQRN+ELD EKRLYPGGK+FDPLGLA DP KKA LQLAEIKHARLAMV FLGFAVQAA TGKGPLNNWATHLSDPLHTTIIDTFSSS
Subjt:  IEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSSS

AT5G01530.1 light harvesting complex photosystem II2.7e-13883.1Show/hide
Query:  MAAT-ATAAATSSFIGTRLA-DVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQN
        MAAT A AAA SS +GTR+A  + P SGR  A F FGKKK+  KKS      +DRPLW+PGA +P+WLDGSLVGDYGFDPFGLGKPAEYLQ+D+DSLDQN
Subjt:  MAAT-ATAAATSSFIGTRLA-DVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQN

Query:  LAKNVAGDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIG
        LAKN+AGD+IGTR E+++ KSTPFQPY+EVFG+QRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELV+GSSYLGQPLPFSI+TLIWIEVLVIG
Subjt:  LAKNVAGDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIG

Query:  YIEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSSS
        YIEFQRN+ELD EKRLYPGGK+FDPLGLA DPEK A LQLAEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIIDTFSSS
Subjt:  YIEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCGTCTCACAATCCAACGGACACAAAACCACCACCACAGATTATGTGGCAATCGCCGATCACAATTCCCCTTTCTGAGCCACATAATAACCCAACCAAAATCCC
CAATTCCATCACACACTCACCCTTTCCCCCCCTCTCAACTCGCCGCGAAATTCTCGCCGTCGTAATGGCCGCCACCGCCACCGCCGCCGCAACCTCCTCCTTCATCGGAA
CGCGCCTCGCCGACGTTCGGCCGAGTTCCGGGCGAGTCCAAGCCCGATTCTCATTCGGCAAAAAGAAGAGCCCGGCGAAGAAATCGCCGTCGTCGAAGCAGATATCAGAC
CGGCCGCTGTGGTTCCCCGGAGCGAAGGCGCCGGAATGGCTGGACGGAAGCCTGGTGGGCGACTACGGGTTCGATCCGTTCGGGTTGGGGAAACCGGCGGAGTATTTGCA
GTACGATCTGGACTCGTTGGACCAGAACTTGGCGAAGAATGTGGCCGGAGATATAATCGGAACGAGATTCGAGAGCTCGGAAGTGAAATCGACGCCGTTTCAGCCGTACA
CGGAGGTTTTTGGATTGCAGAGATTCCGTGAGTGCGAGCTCATCCATGGAAGGTGGGCCATGTTGGCCACACTCGGTGCTCTCTCTGTTGAGTGGCTCACTGGCGTCACT
TGGCAAGACGCCGGAAAGGTAGAATTAGTGGAAGGTTCATCCTACCTTGGGCAGCCCCTTCCTTTCTCCATCACCACATTGATCTGGATCGAAGTTCTCGTGATCGGATA
CATCGAGTTTCAAAGGAACTCCGAGCTCGACCCCGAGAAGAGATTGTATCCCGGAGGCAAGTATTTTGACCCCTTAGGCTTGGCCGAGGATCCCGAAAAGAAAGCCATCC
TACAATTGGCCGAGATCAAGCATGCTCGCCTTGCCATGGTTGCCTTCCTTGGCTTCGCTGTTCAAGCTGCTGTCACTGGCAAAGGCCCGCTCAACAATTGGGCAACCCAT
CTGAGTGACCCACTCCACACCACCATTATTGACACGTTCTCCTCTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCGTCTCACAATCCAACGGACACAAAACCACCACCACAGATTATGTGGCAATCGCCGATCACAATTCCCCTTTCTGAGCCACATAATAACCCAACCAAAATCCC
CAATTCCATCACACACTCACCCTTTCCCCCCCTCTCAACTCGCCGCGAAATTCTCGCCGTCGTAATGGCCGCCACCGCCACCGCCGCCGCAACCTCCTCCTTCATCGGAA
CGCGCCTCGCCGACGTTCGGCCGAGTTCCGGGCGAGTCCAAGCCCGATTCTCATTCGGCAAAAAGAAGAGCCCGGCGAAGAAATCGCCGTCGTCGAAGCAGATATCAGAC
CGGCCGCTGTGGTTCCCCGGAGCGAAGGCGCCGGAATGGCTGGACGGAAGCCTGGTGGGCGACTACGGGTTCGATCCGTTCGGGTTGGGGAAACCGGCGGAGTATTTGCA
GTACGATCTGGACTCGTTGGACCAGAACTTGGCGAAGAATGTGGCCGGAGATATAATCGGAACGAGATTCGAGAGCTCGGAAGTGAAATCGACGCCGTTTCAGCCGTACA
CGGAGGTTTTTGGATTGCAGAGATTCCGTGAGTGCGAGCTCATCCATGGAAGGTGGGCCATGTTGGCCACACTCGGTGCTCTCTCTGTTGAGTGGCTCACTGGCGTCACT
TGGCAAGACGCCGGAAAGGTAGAATTAGTGGAAGGTTCATCCTACCTTGGGCAGCCCCTTCCTTTCTCCATCACCACATTGATCTGGATCGAAGTTCTCGTGATCGGATA
CATCGAGTTTCAAAGGAACTCCGAGCTCGACCCCGAGAAGAGATTGTATCCCGGAGGCAAGTATTTTGACCCCTTAGGCTTGGCCGAGGATCCCGAAAAGAAAGCCATCC
TACAATTGGCCGAGATCAAGCATGCTCGCCTTGCCATGGTTGCCTTCCTTGGCTTCGCTGTTCAAGCTGCTGTCACTGGCAAAGGCCCGCTCAACAATTGGGCAACCCAT
CTGAGTGACCCACTCCACACCACCATTATTGACACGTTCTCCTCTTCTTAA
Protein sequenceShow/hide protein sequence
MDSSHNPTDTKPPPQIMWQSPITIPLSEPHNNPTKIPNSITHSPFPPLSTRREILAVVMAATATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISD
RPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVT
WQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATH
LSDPLHTTIIDTFSSS