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Lag0012389 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012389
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr1:40648203..40648520
RNA-Seq ExpressionLag0012389
SyntenyLag0012389
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023918260.1 uncharacterized protein LOC112029812 [Quercus suber]7.4e-0437.97Show/hide
Query:  NVDAVVDTVNGKIGIGVVLRDQQGNMITAMSKSAYIGPNVLCAEVVAMLECLKLAREMNVESVRSLTDSSNLNRILQGI
        N+DA + TV+  +GIGVV+RD +G+++ A+SK   +    L  EV AM E +  A+++ ++ V   TDS+ L+  L  I
Subjt:  NVDAVVDTVNGKIGIGVVLRDQQGNMITAMSKSAYIGPNVLCAEVVAMLECLKLAREMNVESVRSLTDSSNLNRILQGI
XP_042942883.1 uncharacterized protein LOC122277065 [Carya illinoinensis]5.6e-0440.51Show/hide
Query:  MNVDAVVDTVNGKIGIGVVLRDQQGNMITAMSKSAYIGPNVLCAEVVAMLECLKLAREMNVESVRSLTDSSNLNRILQG
        +N DA VD V G +GIGVV+RD +G  I  M +S  + P+ L AE    L   + AR++ +  V    DS  + R LQG
Subjt:  MNVDAVVDTVNGKIGIGVVLRDQQGNMITAMSKSAYIGPNVLCAEVVAMLECLKLAREMNVESVRSLTDSSNLNRILQG
TrEMBL top hitse value%identityAlignment
A0A2I4HHX4 uncharacterized protein LOC1090179476.1e-0438.96Show/hide
Query:  MNVDAVVDTVNGKIGIGVVLRDQQGNMITAMSKSAYIGPNVLCAEVVAMLECLKLAREMNVESVRSLTDSSNLNRIL
        +N D  VD V G IGIGVV+RD+ G +I  + +   + P+ L AE    L+ +KLARE+ +  V    DS  + + L
Subjt:  MNVDAVVDTVNGKIGIGVVLRDQQGNMITAMSKSAYIGPNVLCAEVVAMLECLKLAREMNVESVRSLTDSSNLNRIL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTTGCCAGATTCCATTGAGTCATTGGCTTTTCAAGGGGAGGAAGATGTTATCATGAATGTGGATGCAGTCGTTGATACTGTCAATGGTAAGATTGGGATAGGTGT
TGTCCTACGAGATCAACAGGGGAATATGATTACTGCAATGAGTAAGTCTGCTTATATTGGTCCTAATGTTTTATGTGCAGAAGTCGTTGCTATGTTAGAATGTCTCAAAC
TAGCTCGCGAGATGAACGTGGAGAGCGTGAGATCTCTGACAGATTCATCTAATTTGAATCGTATTCTCCAGGGGATATGTCGTGTGAAGCCAGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGACTTTGCCAGATTCCATTGAGTCATTGGCTTTTCAAGGGGAGGAAGATGTTATCATGAATGTGGATGCAGTCGTTGATACTGTCAATGGTAAGATTGGGATAGGTGT
TGTCCTACGAGATCAACAGGGGAATATGATTACTGCAATGAGTAAGTCTGCTTATATTGGTCCTAATGTTTTATGTGCAGAAGTCGTTGCTATGTTAGAATGTCTCAAAC
TAGCTCGCGAGATGAACGTGGAGAGCGTGAGATCTCTGACAGATTCATCTAATTTGAATCGTATTCTCCAGGGGATATGTCGTGTGAAGCCAGTATGA
Protein sequenceShow/hide protein sequence
MTLPDSIESLAFQGEEDVIMNVDAVVDTVNGKIGIGVVLRDQQGNMITAMSKSAYIGPNVLCAEVVAMLECLKLAREMNVESVRSLTDSSNLNRILQGICRVKPV