; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0012411 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012411
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRING-CH-type domain-containing protein
Genome locationchr1:40874212..40875220
RNA-Seq ExpressionLag0012411
SyntenyLag0012411
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR011016 - Zinc finger, RING-CH-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595366.1 hypothetical protein SDJN03_11919, partial [Cucurbita argyrosperma subsp. sororia]2.2e-7487.5Show/hide
Query:  MAALETAGVDLEEGDRGG-GGRRAEAGSGVGEVKVHLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVI
        MAALETAGVDLEEG RGG GGRRAEA    GEVKVH ERDCRICHLGLESNSSECG AIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHS+VQNV 
Subjt:  MAALETAGVDLEEGDRGG-GGRRAEAGSGVGEVKVHLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVI

Query:  GGHELEPMEQLHESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
        G HELE MEQLHE NNGT+ST TVAASVAA+P GGR FWQVHRVLNFLLAC+VFAFVISWLFHFN+ S
Subjt:  GGHELEPMEQLHESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

KAG7027374.1 hypothetical protein SDJN02_11386 [Cucurbita argyrosperma subsp. argyrosperma]1.4e-7386.9Show/hide
Query:  MAALETAGVDLEEGDRGG-GGRRAEAGSGVGEVKVHLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVI
        MAALETAGVDLEEG RGG GGR AEA    GEVKVH ERDCRICHLGLESNSSECG AIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHS+VQNV 
Subjt:  MAALETAGVDLEEGDRGG-GGRRAEAGSGVGEVKVHLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVI

Query:  GGHELEPMEQLHESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
        G HELE MEQLHE NNGT+ST TVAASVAA+P GGR FWQVHRVLNFLLAC+VFAFVISWLFHFN+ S
Subjt:  GGHELEPMEQLHESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

XP_022151515.1 uncharacterized protein LOC111019441, partial [Momordica charantia]1.0e-6376.33Show/hide
Query:  MAALETAG-VDLEEGD-RGGGGRRAEAGSGVGEVKVHLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNV
        +AA++T G  DLE+G    GG RR EA           ERDCRICHLGLES+S ECGI IELGCSCKNDL AAHKHCAEAWFKIRGNKTCEICHSVV NV
Subjt:  MAALETAG-VDLEEGD-RGGGGRRAEAGSGVGEVKVHLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNV

Query:  IGGHELEPMEQLHESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
        IG HE+EP+EQL ESNN TVST TVA SV   P GGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
Subjt:  IGGHELEPMEQLHESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

XP_023517920.1 uncharacterized protein LOC111781512 isoform X1 [Cucurbita pepo subsp. pepo]8.2e-7487.5Show/hide
Query:  MAALETAGVDLEEGDRGG-GGRRAEAGSGVGEVKVHLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVI
        MAALETAGVDLEEG RGG GGRRAEA    GEVKVH ERDCRICHLGLESNSSECG AIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHS+VQNV 
Subjt:  MAALETAGVDLEEGDRGG-GGRRAEAGSGVGEVKVHLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVI

Query:  GGHELEPMEQLHESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
        G HELE MEQLHE NNGT+ST TVAASV AAP GGR FWQVHRVLNFLLAC+VFAFVISWLFHFN+ S
Subjt:  GGHELEPMEQLHESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

XP_038883458.1 uncharacterized protein LOC120074413 [Benincasa hispida]2.2e-6680.47Show/hide
Query:  MAALETAGVDLEEGDRGGGGRRAEAGSGVG-EVKV-HLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNV
        MAALETAG DLE+G R      AE GSGVG EVKV +LERDCRICHLGL SNS+E G+ IELGC CKNDL+ AHKHCAEAWFKIRGNKTCEICHS+V+NV
Subjt:  MAALETAGVDLEEGDRGGGGRRAEAGSGVG-EVKV-HLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNV

Query:  IGGHELEPMEQLHESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
        +   E E  EQLHESNNGTVSTATVAASVAA P GGRSFW VHRVLNFLLACMVFAFVISWLFHFNVPS
Subjt:  IGGHELEPMEQLHESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

TrEMBL top hitse value%identityAlignment
A0A0B0MSH9 E3 ubiquitin-protein ligase MARCH24.7e-5171.92Show/hide
Query:  AGSGVGEVKVHL---ERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVIGGHELEPMEQLHESNNGTVSTA
        A SG  E+K+HL   E+DCRICHLGLESNS E G  IELGCSCK+DLAAAHKHCAEAWFKIRGNKTCEICHS+ +NV+G +E+E  EQ +E+N+   STA
Subjt:  AGSGVGEVKVHL---ERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVIGGHELEPMEQLHESNNGTVSTA

Query:  TVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
        T A S AA+    RSFW  HR LNFLLACMVFAFVISWLFHFNVPS
Subjt:  TVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

A0A2P5YEN9 RING-CH-type domain-containing protein4.7e-5171.92Show/hide
Query:  AGSGVGEVKVHL---ERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVIGGHELEPMEQLHESNNGTVSTA
        A SG  E+K+HL   E+DCRICHLGLESNS E G  IELGCSCK+DLAAAHKHCAEAWFKIRGNKTCEICHS+ +NV+G +E+E  EQ +E+N+   STA
Subjt:  AGSGVGEVKVHL---ERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVIGGHELEPMEQLHESNNGTVSTA

Query:  TVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
        T A S AA+    RSFW  HR LNFLLACMVFAFVISWLFHFNVPS
Subjt:  TVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

A0A6A3CP99 Laccase-8-like1.2e-5165.12Show/hide
Query:  GVDLEEGDRGGGGR---------RAEAGSGVGEVKVHL---ERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVV
        G D E GD  G GR           +  SG  E+KVHL   E++CRICHLGLESNS E G+AIELGCSCK+DLA AHKHCAEAWFKIRGNKTCEICHS+ 
Subjt:  GVDLEEGDRGGGGR---------RAEAGSGVGEVKVHL---ERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVV

Query:  QNVIGGHELEPMEQLHESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
        +NVI  +E+E MEQ +E+N+   STAT A S AA+    RSFW  HR LNFLLACMVFAFVISWLFHF+VPS
Subjt:  QNVIGGHELEPMEQLHESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

A0A6J1CWG7 uncharacterized protein LOC111015024 isoform X23.3e-5272.11Show/hide
Query:  EAGSGVGEVKVHL---ERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVIGGHELEPMEQLHESNNGTVST
        E  +G+ E+KVHL   ERDCRICHLGLESNS E GI IELGCSCK+DLAAAHKHCAE WFKIRGNKTCEICHS+ +N++G HE+E  EQ  ESNN + ST
Subjt:  EAGSGVGEVKVHL---ERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVIGGHELEPMEQLHESNNGTVST

Query:  ATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
        A VAAS+ ++    +SFW+ HR LNFLLACMVFAFVISWLFHFNVPS
Subjt:  ATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

A0A6J1DBE4 uncharacterized protein LOC1110194414.9e-6476.33Show/hide
Query:  MAALETAG-VDLEEGD-RGGGGRRAEAGSGVGEVKVHLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNV
        +AA++T G  DLE+G    GG RR EA           ERDCRICHLGLES+S ECGI IELGCSCKNDL AAHKHCAEAWFKIRGNKTCEICHSVV NV
Subjt:  MAALETAG-VDLEEGD-RGGGGRRAEAGSGVGEVKVHLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNV

Query:  IGGHELEPMEQLHESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
        IG HE+EP+EQL ESNN TVST TVA SV   P GGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
Subjt:  IGGHELEPMEQLHESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G37950.1 RING/FYVE/PHD zinc finger superfamily protein8.9e-3454.74Show/hide
Query:  ERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVIGGHEL--EPMEQLHESNNGTVSTATVAASVAAAPGGG
        E+DCRICHLG+E++    G AIELGCSCK+DLA AH+ CAE WFKI+G+KTCEIC SV +NV G +E+    ME+  E  NG           AA  GGG
Subjt:  ERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVIGGHEL--EPMEQLHESNNGTVSTATVAASVAAAPGGG

Query:  RSF----WQVHRVLNFLLACMVFAFVISWLFHFNVPS
         +     WQ  RV+N +LACMVF F ISW+FHF+V S
Subjt:  RSF----WQVHRVLNFLLACMVFAFVISWLFHFNVPS

AT5G01070.1 RING/FYVE/PHD zinc finger superfamily protein5.8e-1761.4Show/hide
Query:  GEVKVHLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNK
        G ++   E+DCRICHLGLES+  ECG  + LGCSCK+DL   HK CA+ WFKI+GNK
Subjt:  GEVKVHLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNK

AT5G01070.2 RING/FYVE/PHD zinc finger superfamily protein1.4e-3451.45Show/hide
Query:  GEVKVHLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVIGGHELEPMEQLHESNNGTVSTATVAASVAA
        G ++   E+DCRICHLGLES+  ECG  + LGCSCK+DL   HK CA+ WFKI+GNKTCEIC S+ QN     + E  +   E+N   V        VA 
Subjt:  GEVKVHLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVIGGHELEPMEQLHESNNGTVSTATVAASVAA

Query:  APGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
        +    R   + +R LNFLL CMV AFVISW FHFN+PS
Subjt:  APGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

AT5G05830.1 RING/FYVE/PHD zinc finger superfamily protein4.2e-4462.24Show/hide
Query:  GVGEVKVHL---ERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVIGGHELEPMEQLHESNNGTVSTATVA
        G+ E  VHL   ERDCRICH+ L++ + E G+ IELGCSCK DLAAAHKHCAE WFKI+GNK CE+C S+  NV+G  E+E  E  +E+N   V   T+ 
Subjt:  GVGEVKVHL---ERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVIGGHELEPMEQLHESNNGTVSTATVA

Query:  ASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
         S       GRSFWQ HR LNFLLACMVFAFVISWLFHFNVPS
Subjt:  ASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

AT5G59000.1 RING/FYVE/PHD zinc finger superfamily protein3.4e-2538.27Show/hide
Query:  LETAGVDLEEGDRGGGGRRAEAGSGVGEVKVHLE---RDCRICHLGLESNSSE-------------------------------CGIAIELGCSCKNDLA
        LE+ GV   E     GG++          K   +   RDCRICHL LE+N                                   G+ ++LGCSCK DL 
Subjt:  LETAGVDLEEGDRGGGGRRAEAGSGVGEVKVHLE---RDCRICHLGLESNSSE-------------------------------CGIAIELGCSCKNDLA

Query:  AAHKHCAEAWFKIRGNKTCEICHSVVQNVIGGHELEPMEQLHESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNV
         AH  CAE WFKI+GN TCEIC ++  NV  G +  P     ES   T S A    S+       R  W    V+NFLLA MVFAFV+SWLFHF V
Subjt:  AAHKHCAEAWFKIRGNKTCEICHSVVQNVIGGHELEPMEQLHESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTTTGGAAACTGCCGGAGTTGATTTGGAGGAAGGTGACCGTGGCGGCGGTGGTCGGCGGGCGGAGGCTGGAAGTGGGGTTGGTGAAGTGAAGGTGCATTTGGA
GAGGGATTGTAGGATTTGCCATTTGGGTTTGGAGAGCAATAGCAGTGAGTGTGGGATTGCAATTGAATTGGGCTGTTCTTGTAAGAATGATTTGGCTGCTGCCCACAAGC
ATTGTGCTGAGGCTTGGTTCAAAATCAGAGGAAACAAGACGTGTGAGATATGTCATTCTGTTGTACAAAATGTCATCGGAGGACATGAACTAGAACCAATGGAGCAACTC
CATGAGTCGAACAACGGGACGGTATCGACAGCCACGGTTGCAGCATCGGTGGCTGCCGCTCCCGGGGGTGGCCGGAGCTTTTGGCAGGTTCACCGGGTGCTGAATTTTCT
TCTTGCTTGTATGGTATTTGCTTTTGTCATATCTTGGCTGTTTCATTTCAATGTGCCATCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCTTTGGAAACTGCCGGAGTTGATTTGGAGGAAGGTGACCGTGGCGGCGGTGGTCGGCGGGCGGAGGCTGGAAGTGGGGTTGGTGAAGTGAAGGTGCATTTGGA
GAGGGATTGTAGGATTTGCCATTTGGGTTTGGAGAGCAATAGCAGTGAGTGTGGGATTGCAATTGAATTGGGCTGTTCTTGTAAGAATGATTTGGCTGCTGCCCACAAGC
ATTGTGCTGAGGCTTGGTTCAAAATCAGAGGAAACAAGACGTGTGAGATATGTCATTCTGTTGTACAAAATGTCATCGGAGGACATGAACTAGAACCAATGGAGCAACTC
CATGAGTCGAACAACGGGACGGTATCGACAGCCACGGTTGCAGCATCGGTGGCTGCCGCTCCCGGGGGTGGCCGGAGCTTTTGGCAGGTTCACCGGGTGCTGAATTTTCT
TCTTGCTTGTATGGTATTTGCTTTTGTCATATCTTGGCTGTTTCATTTCAATGTGCCATCATAG
Protein sequenceShow/hide protein sequence
MAALETAGVDLEEGDRGGGGRRAEAGSGVGEVKVHLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVIGGHELEPMEQL
HESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS