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Lag0012426 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012426
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptiont-SNARE coiled-coil homology domain-containing protein
Genome locationchr1:40992214..40993130
RNA-Seq ExpressionLag0012426
SyntenyLag0012426
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0006906 - vesicle fusion (biological process)
GO:0048278 - vesicle docking (biological process)
GO:0012505 - endomembrane system (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031201 - SNARE complex (cellular component)
GO:0000149 - SNARE binding (molecular function)
GO:0005484 - SNAP receptor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044019.1 syntaxin-71 [Cucumis melo var. makuwa]4.9e-3493.33Show/hide
Query:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKKNGGWTSSASRTE
        KA+DASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLAL DRIQAIPDGT T  K NGGWTSSASRTE
Subjt:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKKNGGWTSSASRTE

KAG6607729.1 Syntaxin-71, partial [Cucurbita argyrosperma subsp. sororia]4.9e-3491.11Show/hide
Query:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKKNGGWTSSASRTE
        KA+DAS+EKNRASVVALNAEIRRTKARLLEE+PKLQRLA+KRVKGLSTEDLTTRNDLVLAL D+IQAIPDGTAT+ KKNGGWTSSASRTE
Subjt:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKKNGGWTSSASRTE

XP_008442667.1 PREDICTED: syntaxin-71 [Cucumis melo]4.9e-3493.33Show/hide
Query:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKKNGGWTSSASRTE
        KA+DASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLAL DRIQAIPDGT T  K NGGWTSSASRTE
Subjt:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKKNGGWTSSASRTE

XP_022145692.1 syntaxin-71 [Momordica charantia]4.9e-3493.33Show/hide
Query:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKKNGGWTSSASRTE
        KA+DASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLAL DRIQAIPDGT TA KK GGWTSSASRT+
Subjt:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKKNGGWTSSASRTE

XP_023521570.1 syntaxin-71-like [Cucurbita pepo subsp. pepo]2.2e-3492.22Show/hide
Query:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKKNGGWTSSASRTE
        KA+DAS+EKNRASVVALNAEIRRTKARLLEE+PKLQRLA+KRVKGLSTEDLTTRNDLVLAL DRIQAIPDGTAT+ KKNGGWTSSASRTE
Subjt:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKKNGGWTSSASRTE

TrEMBL top hitse value%identityAlignment
A0A0A0LFR8 t-SNARE coiled-coil homology domain-containing protein2.4e-3493.33Show/hide
Query:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKKNGGWTSSASRTE
        KA+DASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLAL DRIQAIPDGT T  K NGGWTSSASRTE
Subjt:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKKNGGWTSSASRTE

A0A1S3B689 syntaxin-712.4e-3493.33Show/hide
Query:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKKNGGWTSSASRTE
        KA+DASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLAL DRIQAIPDGT T  K NGGWTSSASRTE
Subjt:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKKNGGWTSSASRTE

A0A5A7TS26 Syntaxin-712.4e-3493.33Show/hide
Query:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKKNGGWTSSASRTE
        KA+DASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLAL DRIQAIPDGT T  K NGGWTSSASRTE
Subjt:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKKNGGWTSSASRTE

A0A6J1CXF0 syntaxin-712.4e-3493.33Show/hide
Query:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKKNGGWTSSASRTE
        KA+DASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLAL DRIQAIPDGT TA KK GGWTSSASRT+
Subjt:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKKNGGWTSSASRTE

A0A6J1J294 syntaxin-71-like3.1e-3492.22Show/hide
Query:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKKNGGWTSSASRTE
        KA+DAS EKNRASVVALNAEIRRTKARLLEE+PKLQRLA+KRVKGLSTEDLTTRNDLVLAL DRIQAIPDGTAT+ KKNGGWTSSASRTE
Subjt:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKKNGGWTSSASRTE

SwissProt top hitse value%identityAlignment
Q94KK5 Syntaxin-737.1e-2058.7Show/hide
Query:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKKNGGWTSSASRTEER
        K +D S E N+A  VA+NAEIRRTKARLLE +PKLQRL++K+VKGLS E+L  RNDLVL+L D+I+AIP+ +A      GGW +S S +  R
Subjt:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKKNGGWTSSASRTEER

Q94KK6 Syntaxin-721.0e-1859.09Show/hide
Query:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKK-NGGWTSSAS
        KA+ AS EKNRA+ VA+NAE+RRTKARL E+V KLQ+LAVK++KGL+ E+  +R DLV+AL+DR+QAIPDG    AK+ N  W  +++
Subjt:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKK-NGGWTSSAS

Q9SF29 Syntaxin-711.6e-2471.26Show/hide
Query:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKKNGGWTSSAS
        KA+  +KEKNRA+ VA+NAEIRRTKARL EEVPKLQRLAVKRVKGL+TE+L  RNDLVLAL  RI+AIPDGTA   K    WT S++
Subjt:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKKNGGWTSSAS

Arabidopsis top hitse value%identityAlignment
AT3G09740.1 syntaxin of plants 711.2e-2571.26Show/hide
Query:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKKNGGWTSSAS
        KA+  +KEKNRA+ VA+NAEIRRTKARL EEVPKLQRLAVKRVKGL+TE+L  RNDLVLAL  RI+AIPDGTA   K    WT S++
Subjt:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKKNGGWTSSAS

AT3G45280.1 syntaxin of plants 727.3e-2059.09Show/hide
Query:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKK-NGGWTSSAS
        KA+ AS EKNRA+ VA+NAE+RRTKARL E+V KLQ+LAVK++KGL+ E+  +R DLV+AL+DR+QAIPDG    AK+ N  W  +++
Subjt:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKK-NGGWTSSAS

AT3G61450.1 syntaxin of plants 735.1e-2158.7Show/hide
Query:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKKNGGWTSSASRTEER
        K +D S E N+A  VA+NAEIRRTKARLLE +PKLQRL++K+VKGLS E+L  RNDLVL+L D+I+AIP+ +A      GGW +S S +  R
Subjt:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKKNGGWTSSASRTEER

AT3G61450.2 syntaxin of plants 735.1e-2158.7Show/hide
Query:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKKNGGWTSSASRTEER
        K +D S E N+A  VA+NAEIRRTKARLLE +PKLQRL++K+VKGLS E+L  RNDLVL+L D+I+AIP+ +A      GGW +S S +  R
Subjt:  KADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAAKKNGGWTSSASRTEER


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTTGCTCGACTCTATGCCACCGTCGAAGCCGACATTGAAGCCACTCTCCAGGTTTGATGTCGATCCCTTGCTCAATTTCTCAGTTCCTACTCGTTCTAAAGCGGA
TGATGCTTCTAAAGAGAAGAATAGGGCGTCGGTGGTGGCGTTGAATGCAGAGATTCGTCGTACCAAGGCTCGATTACTGGAGGAGGTCCCCAAGTTGCAGAGATTGGCTG
TAAAGAGGGTAAAAGGACTATCAACTGAAGATCTTACCACTCGAAATGATTTGGTGCTTGCATTGTCGGATCGGATTCAAGCTATACCAGATGGGACTGCTACTGCAGCG
AAGAAGAATGGTGGTTGGACATCCTCAGCTTCACGTACTGAAGAAAGAAGAAAGAAGAAAAAAAAAAAAATTCAGTCGCCGGCGGCTGGCGGCGGCGGCGGCGTGTGGTG
GCCGCCGGTCGCCGGACTTAGGAAGAAGAAGAAGGAGGAGGGAGAAGATGGAGAAGAAGGAAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTTTGCTCGACTCTATGCCACCGTCGAAGCCGACATTGAAGCCACTCTCCAGGTTTGATGTCGATCCCTTGCTCAATTTCTCAGTTCCTACTCGTTCTAAAGCGGA
TGATGCTTCTAAAGAGAAGAATAGGGCGTCGGTGGTGGCGTTGAATGCAGAGATTCGTCGTACCAAGGCTCGATTACTGGAGGAGGTCCCCAAGTTGCAGAGATTGGCTG
TAAAGAGGGTAAAAGGACTATCAACTGAAGATCTTACCACTCGAAATGATTTGGTGCTTGCATTGTCGGATCGGATTCAAGCTATACCAGATGGGACTGCTACTGCAGCG
AAGAAGAATGGTGGTTGGACATCCTCAGCTTCACGTACTGAAGAAAGAAGAAAGAAGAAAAAAAAAAAAATTCAGTCGCCGGCGGCTGGCGGCGGCGGCGGCGTGTGGTG
GCCGCCGGTCGCCGGACTTAGGAAGAAGAAGAAGGAGGAGGGAGAAGATGGAGAAGAAGGAAGATAG
Protein sequenceShow/hide protein sequence
MPLLDSMPPSKPTLKPLSRFDVDPLLNFSVPTRSKADDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALSDRIQAIPDGTATAA
KKNGGWTSSASRTEERRKKKKKKIQSPAAGGGGGVWWPPVAGLRKKKKEEGEDGEEGR