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Lag0012427 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012427
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCyclin-dependent protein kinase inhibitor SMR2
Genome locationchr1:40997163..40998162
RNA-Seq ExpressionLag0012427
SyntenyLag0012427
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052125.1 cyclin-dependent protein kinase inhibitor SMR2 [Cucumis melo var. makuwa]5.4e-2365.93Show/hide
Query:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPNGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVQ
        MS+ HKSD +K ++T K LE  DRS +E   EAL+ A +  GESCRTPTSLRHRIP  +SCPTTPRK++V  KRK SDQSFFEATGRGEV+
Subjt:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPNGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVQ

KAE8652786.1 hypothetical protein Csa_022878 [Cucumis sativus]7.7e-2264.44Show/hide
Query:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPNGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEV
        MS+FHKSD QK ++  +  E  DRS +E   EAL+ A +  GESCRTPTS +HRIP  +SCPTTPRK++VV KRKFSDQSFFEATGRGE+
Subjt:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPNGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEV

KAG6583595.1 hypothetical protein SDJN03_19527, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2372.53Show/hide
Query:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPNGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVQ
        MS+FHKSD QK  +  KP EE DRS +EDG      A + GGESCRTPTSLRHRIPT RS PTTPRKRKV SKRKFSDQSFFE TGRGEV+
Subjt:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPNGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVQ

KAG6586014.1 hypothetical protein SDJN03_18747, partial [Cucurbita argyrosperma subsp. sororia]8.0e-2772.53Show/hide
Query:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPNGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVQ
        MSEF  SD QKS++ QKP EE DRS +EDG EAL    +GGGESCRTP+SL+HRIP  RSCPTTPRK+KVVSKRKFSDQSFFE+T R EV+
Subjt:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPNGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVQ

KAG7019295.1 hypothetical protein SDJN02_18255, partial [Cucurbita argyrosperma subsp. argyrosperma]9.1e-2370.33Show/hide
Query:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPNGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVQ
        MS+FHKSD QK  +  KP EE DRS +EDG      A +  GESCRTPTSLRHRIPT RS PTTPRKRK+ SKRKFSDQSFFE TGRGEV+
Subjt:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPNGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVQ

TrEMBL top hitse value%identityAlignment
A0A067F2H9 Uncharacterized protein (Fragment)3.4e-0748.57Show/hide
Query:  RSDDEDGREALQVAPNGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVS--KRKFSDQSFFEATGRGEVQ
        ++++E G E    + +   E C+TPTS  H+IP ++SCPTTPRK+  VS  KRK  +  FFEATGR EV+
Subjt:  RSDDEDGREALQVAPNGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVS--KRKFSDQSFFEATGRGEVQ

A0A0A0LV74 Uncharacterized protein1.1e-2165.17Show/hide
Query:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPNGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKFSDQSFFEATGRGE
        MS+FHKSD QK ++  +  E  DRS +E   EAL+ A +  GESCRTPTS +HRIP  +SCPTTPRK++VV KRKFSDQSFFEATGRGE
Subjt:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPNGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKFSDQSFFEATGRGE

A0A2H5Q221 Uncharacterized protein3.4e-0748.57Show/hide
Query:  RSDDEDGREALQVAPNGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVS--KRKFSDQSFFEATGRGEVQ
        ++++E G E    + +   E C+TPTS  H+IP ++SCPTTPRK+  VS  KRK  +  FFEATGR EV+
Subjt:  RSDDEDGREALQVAPNGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVS--KRKFSDQSFFEATGRGEVQ

A0A5D3BHE9 Cyclin-dependent protein kinase inhibitor SMR22.6e-2365.93Show/hide
Query:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPNGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVQ
        MS+ HKSD +K ++T K LE  DRS +E   EAL+ A +  GESCRTPTSLRHRIP  +SCPTTPRK++V  KRK SDQSFFEATGRGEV+
Subjt:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPNGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVQ

V4RSW1 Uncharacterized protein3.4e-0748.57Show/hide
Query:  RSDDEDGREALQVAPNGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVS--KRKFSDQSFFEATGRGEVQ
        ++++E G E    + +   E C+TPTS  H+IP ++SCPTTPRK+  VS  KRK  +  FFEATGR EV+
Subjt:  RSDDEDGREALQVAPNGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVS--KRKFSDQSFFEATGRGEVQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGAATTTCACAAATCCGATCTCCAAAAGTCAGTACAAACTCAAAAGCCACTGGAAGAAGCTGATCGGAGCGACGACGAAGACGGTCGAGAAGCCCTTCAGGTGGC
ACCCAATGGTGGCGGAGAGAGCTGCCGAACTCCGACATCTCTCCGACATCGAATTCCGACCGTGCGAAGCTGCCCGACGACGCCAAGAAAGCGGAAAGTTGTGAGCAAGA
GGAAATTTTCAGATCAAAGCTTCTTTGAGGCCACGGGAAGGGGAGAGGTTCAGTTCAGAGGGGGCTGGCCTGAGGTGGATCTGCCACTGCATATATTTTTATATGTAATA
GTCTCATTCCTTAAGGAACTTCAATTGACGTCAAGGAGGGAGAGTGAAATCGTAAAGTTCTTGTCCGATGACTATGTTTGCACAACAGTAAACTCGCGTTCAAGCGATGT
TTTTTTAGTACATCAACATTCGGGGGTGGGGGAGATTCAAACCTCTGACCTCATGGTCGAGGATACATGCCAATTACAGCTATGCTCGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGAATTTCACAAATCCGATCTCCAAAAGTCAGTACAAACTCAAAAGCCACTGGAAGAAGCTGATCGGAGCGACGACGAAGACGGTCGAGAAGCCCTTCAGGTGGC
ACCCAATGGTGGCGGAGAGAGCTGCCGAACTCCGACATCTCTCCGACATCGAATTCCGACCGTGCGAAGCTGCCCGACGACGCCAAGAAAGCGGAAAGTTGTGAGCAAGA
GGAAATTTTCAGATCAAAGCTTCTTTGAGGCCACGGGAAGGGGAGAGGTTCAGTTCAGAGGGGGCTGGCCTGAGGTGGATCTGCCACTGCATATATTTTTATATGTAATA
GTCTCATTCCTTAAGGAACTTCAATTGACGTCAAGGAGGGAGAGTGAAATCGTAAAGTTCTTGTCCGATGACTATGTTTGCACAACAGTAAACTCGCGTTCAAGCGATGT
TTTTTTAGTACATCAACATTCGGGGGTGGGGGAGATTCAAACCTCTGACCTCATGGTCGAGGATACATGCCAATTACAGCTATGCTCGCTTTGA
Protein sequenceShow/hide protein sequence
MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPNGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVQFRGGWPEVDLPLHIFLYVI
VSFLKELQLTSRRESEIVKFLSDDYVCTTVNSRSSDVFLVHQHSGVGEIQTSDLMVEDTCQLQLCSL