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Lag0012445 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012445
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCopper ion transmembrane transporter
Genome locationchr1:41121404..41121775
RNA-Seq ExpressionLag0012445
SyntenyLag0012445
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595353.1 hypothetical protein SDJN03_11906, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3069.92Show/hide
Query:  MPRFLFLLFIFANALLNSVAVGAAPPQTSAEPPSARKLGKHRSAAVVSSSPSEAPRSEMKVQAAAASGGGSGNEIQLENREHRKSRDKSIAGGGVILGGL
        M  FLFLLFIFA+ALL+S AV       +AEPPSARKLG H SAA VSSSPSEAP+SE+KV               LENREH KSRD SIAGGGVILGGL
Subjt:  MPRFLFLLFIFANALLNSVAVGAAPPQTSAEPPSARKLGKHRSAAVVSSSPSEAPRSEMKVQAAAASGGGSGNEIQLENREHRKSRDKSIAGGGVILGGL

Query:  ATTFLVAIICYIRATRRQNSEVK
        ATTF VAIICYIRAT+RQNSEVK
Subjt:  ATTFLVAIICYIRATRRQNSEVK

KAG6603622.1 hypothetical protein SDJN03_04231, partial [Cucurbita argyrosperma subsp. sororia]9.8e-4079.83Show/hide
Query:  MPRFLFLLFIFANALLNSVAVGAAPPQTSAEPPSARKLGKHRSAAVVSSSPSEAPRSEMKVQAAAASGGGSGNEIQLENREHRKSRDKSIAGGGVILGGL
        M  FLFLLFIFANALL SVAVGAAPP T+AEPPS RKLGKH S AVV SSPSEAPRSE KV  + A+ GG+GNEI+LEN EH KS DKS+AGGGVILGGL
Subjt:  MPRFLFLLFIFANALLNSVAVGAAPPQTSAEPPSARKLGKHRSAAVVSSSPSEAPRSEMKVQAAAASGGGSGNEIQLENREHRKSRDKSIAGGGVILGGL

Query:  ATTFLVAIICYIRATRRQN
        ATTFLVAI+CYIRATRRQ+
Subjt:  ATTFLVAIICYIRATRRQN

KGN54308.1 hypothetical protein Csa_017945 [Cucumis sativus]2.4e-3873.98Show/hide
Query:  MPRFLFLLFIFANALLNSVAVGAAPPQTSAEPPSARKLGKHRSAAVVSSSPSEAPRSEMKVQ-AAAASGGGSGNEIQLENREHRKSRDKSIAGGGVILGG
        +P FLFLLFIFANAL +S+A  AAPP TSAE PS RKLGKH+S A+  SSP+EAPRS MKVQ  + ASGG SGN ++L N +H KSRDKSIAGGGVILGG
Subjt:  MPRFLFLLFIFANALLNSVAVGAAPPQTSAEPPSARKLGKHRSAAVVSSSPSEAPRSEMKVQ-AAAASGGGSGNEIQLENREHRKSRDKSIAGGGVILGG

Query:  LATTFLVAIICYIRATRRQNSEV
        LATTFLVA+ICYIRATRRQ SE+
Subjt:  LATTFLVAIICYIRATRRQNSEV

XP_008448528.1 PREDICTED: uncharacterized protein LOC103490675 [Cucumis melo]4.8e-3976.42Show/hide
Query:  MPRFLFLLFIFANALLNSVAVGAAPPQTSAEPPSARKLGKHRSAAVVSSSPSEAPRSEMKVQ-AAAASGGGSGNEIQLENREHRKSRDKSIAGGGVILGG
        +P FLFLLFIFANA  +S+A  AAPP TSAE PS RKLGKH+S A+  SSP EAPRSEMKVQ  +AASGG SGN +QL N +H KSRDKSIAGGGVILGG
Subjt:  MPRFLFLLFIFANALLNSVAVGAAPPQTSAEPPSARKLGKHRSAAVVSSSPSEAPRSEMKVQ-AAAASGGGSGNEIQLENREHRKSRDKSIAGGGVILGG

Query:  LATTFLVAIICYIRATRRQNSEV
        LATTFLVAIICYIRATRRQ SE+
Subjt:  LATTFLVAIICYIRATRRQNSEV

XP_022151558.1 uncharacterized protein LOC111019472 [Momordica charantia]4.4e-3270.45Show/hide
Query:  MPRFLFLLFIFANALLNSVAV-----GAAPP--QTSAEPPSARKLGKHRSAAVVS--SSPSEAPRSEMKVQAAAASGGGSGNEIQLENREHRKSRDKSIA
        M RFLF+LFIFANA LNSV V     GAAP    T AE PSARKLGKHRSAA VS  SSPSEAPRSEMKVQA +A+    G+        + K+ DKSIA
Subjt:  MPRFLFLLFIFANALLNSVAV-----GAAPP--QTSAEPPSARKLGKHRSAAVVS--SSPSEAPRSEMKVQAAAASGGGSGNEIQLENREHRKSRDKSIA

Query:  GGGVILGGLATTFLVAIICYIRATRRQNSEVK
        GGGVILGGLATTFLVAIICYIRATRR NSEVK
Subjt:  GGGVILGGLATTFLVAIICYIRATRRQNSEVK

TrEMBL top hitse value%identityAlignment
A0A061ERA0 Uncharacterized protein1.7e-1347.83Show/hide
Query:  TSAEPPSARKLGKHRSAAV------VSSSPSEAPRSEMKV----------QAAAASGGGSGNEIQLEN-----REHRKSRDKSIAGGGVILGGLATTFLV
        T+AE P+ RKLGKH+   V       +SSPS+AP+ E  +          Q AA     +G  + +E      ++H +S DKS+AGGGVILGGLATTFLV
Subjt:  TSAEPPSARKLGKHRSAAV------VSSSPSEAPRSEMKV----------QAAAASGGGSGNEIQLEN-----REHRKSRDKSIAGGGVILGGLATTFLV

Query:  AIICYIRATRRQNSE
        A+ICYIRAT R  SE
Subjt:  AIICYIRATRRQNSE

A0A0A0KXQ0 Uncharacterized protein1.2e-3873.98Show/hide
Query:  MPRFLFLLFIFANALLNSVAVGAAPPQTSAEPPSARKLGKHRSAAVVSSSPSEAPRSEMKVQ-AAAASGGGSGNEIQLENREHRKSRDKSIAGGGVILGG
        +P FLFLLFIFANAL +S+A  AAPP TSAE PS RKLGKH+S A+  SSP+EAPRS MKVQ  + ASGG SGN ++L N +H KSRDKSIAGGGVILGG
Subjt:  MPRFLFLLFIFANALLNSVAVGAAPPQTSAEPPSARKLGKHRSAAVVSSSPSEAPRSEMKVQ-AAAASGGGSGNEIQLENREHRKSRDKSIAGGGVILGG

Query:  LATTFLVAIICYIRATRRQNSEV
        LATTFLVA+ICYIRATRRQ SE+
Subjt:  LATTFLVAIICYIRATRRQNSEV

A0A1S3BJV8 uncharacterized protein LOC1034906752.3e-3976.42Show/hide
Query:  MPRFLFLLFIFANALLNSVAVGAAPPQTSAEPPSARKLGKHRSAAVVSSSPSEAPRSEMKVQ-AAAASGGGSGNEIQLENREHRKSRDKSIAGGGVILGG
        +P FLFLLFIFANA  +S+A  AAPP TSAE PS RKLGKH+S A+  SSP EAPRSEMKVQ  +AASGG SGN +QL N +H KSRDKSIAGGGVILGG
Subjt:  MPRFLFLLFIFANALLNSVAVGAAPPQTSAEPPSARKLGKHRSAAVVSSSPSEAPRSEMKVQ-AAAASGGGSGNEIQLENREHRKSRDKSIAGGGVILGG

Query:  LATTFLVAIICYIRATRRQNSEV
        LATTFLVAIICYIRATRRQ SE+
Subjt:  LATTFLVAIICYIRATRRQNSEV

A0A5A7TSM2 Uncharacterized protein2.3e-3976.42Show/hide
Query:  MPRFLFLLFIFANALLNSVAVGAAPPQTSAEPPSARKLGKHRSAAVVSSSPSEAPRSEMKVQ-AAAASGGGSGNEIQLENREHRKSRDKSIAGGGVILGG
        +P FLFLLFIFANA  +S+A  AAPP TSAE PS RKLGKH+S A+  SSP EAPRSEMKVQ  +AASGG SGN +QL N +H KSRDKSIAGGGVILGG
Subjt:  MPRFLFLLFIFANALLNSVAVGAAPPQTSAEPPSARKLGKHRSAAVVSSSPSEAPRSEMKVQ-AAAASGGGSGNEIQLENREHRKSRDKSIAGGGVILGG

Query:  LATTFLVAIICYIRATRRQNSEV
        LATTFLVAIICYIRATRRQ SE+
Subjt:  LATTFLVAIICYIRATRRQNSEV

A0A6J1DCH7 uncharacterized protein LOC1110194722.1e-3270.45Show/hide
Query:  MPRFLFLLFIFANALLNSVAV-----GAAPP--QTSAEPPSARKLGKHRSAAVVS--SSPSEAPRSEMKVQAAAASGGGSGNEIQLENREHRKSRDKSIA
        M RFLF+LFIFANA LNSV V     GAAP    T AE PSARKLGKHRSAA VS  SSPSEAPRSEMKVQA +A+    G+        + K+ DKSIA
Subjt:  MPRFLFLLFIFANALLNSVAV-----GAAPP--QTSAEPPSARKLGKHRSAAVVS--SSPSEAPRSEMKVQAAAASGGGSGNEIQLENREHRKSRDKSIA

Query:  GGGVILGGLATTFLVAIICYIRATRRQNSEVK
        GGGVILGGLATTFLVAIICYIRATRR NSEVK
Subjt:  GGGVILGGLATTFLVAIICYIRATRRQNSEVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09280.1 unknown protein1.7e-1039.36Show/hide
Query:  APPQTSAEPPSARKLGKHRSAAVVSSSPSEAPRSEMKVQAAAASGGGSGNEIQLENREHRKSRDKSIAGGGVILGGLATTFLVAIICYIRATRR
        A   + AEPP+ RKLG+H      + +P  +   E                  +    H  + ++S+AGGGVILGGLATTFLV + CYIRATR+
Subjt:  APPQTSAEPPSARKLGKHRSAAVVSSSPSEAPRSEMKVQAAAASGGGSGNEIQLENREHRKSRDKSIAGGGVILGGLATTFLVAIICYIRATRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGATTTCTCTTCCTTCTCTTCATCTTCGCCAATGCTCTTCTCAATTCAGTCGCCGTCGGAGCCGCTCCGCCGCAGACCTCCGCCGAACCACCTTCCGCCAGAAA
ACTCGGGAAGCACCGGAGTGCGGCGGTTGTTTCTTCGAGTCCGTCTGAAGCGCCGCGTAGCGAAATGAAAGTACAGGCGGCGGCGGCGAGTGGCGGAGGCAGTGGGAATG
AGATTCAATTGGAGAATCGTGAGCATCGTAAGTCGAGAGATAAGTCTATTGCCGGCGGCGGTGTCATCTTGGGCGGACTCGCCACCACGTTTCTGGTAGCGATTATATGT
TACATTAGAGCAACGAGGCGACAGAACTCGGAAGTGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCGATTTCTCTTCCTTCTCTTCATCTTCGCCAATGCTCTTCTCAATTCAGTCGCCGTCGGAGCCGCTCCGCCGCAGACCTCCGCCGAACCACCTTCCGCCAGAAA
ACTCGGGAAGCACCGGAGTGCGGCGGTTGTTTCTTCGAGTCCGTCTGAAGCGCCGCGTAGCGAAATGAAAGTACAGGCGGCGGCGGCGAGTGGCGGAGGCAGTGGGAATG
AGATTCAATTGGAGAATCGTGAGCATCGTAAGTCGAGAGATAAGTCTATTGCCGGCGGCGGTGTCATCTTGGGCGGACTCGCCACCACGTTTCTGGTAGCGATTATATGT
TACATTAGAGCAACGAGGCGACAGAACTCGGAAGTGAAGTGA
Protein sequenceShow/hide protein sequence
MPRFLFLLFIFANALLNSVAVGAAPPQTSAEPPSARKLGKHRSAAVVSSSPSEAPRSEMKVQAAAASGGGSGNEIQLENREHRKSRDKSIAGGGVILGGLATTFLVAIIC
YIRATRRQNSEVK