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Lag0012458 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012458
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionchromatin remodeling protein EBS-like isoform X2
Genome locationchr1:41251989..41255947
RNA-Seq ExpressionLag0012458
SyntenyLag0012458
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0003682 - chromatin binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052826.1 protein mlo2-like isoform X2 [Cucumis melo var. makuwa]5.1e-1069.39Show/hide
Query:  MSILCELVVEFHPSSMRMAIEEAKKLDHFLCSDCSSENDANRSLNPFPV
        + +L + +  FHPS M M IEEAKKLDHFLCSDCSS+N+ANRSLN FPV
Subjt:  MSILCELVVEFHPSSMRMAIEEAKKLDHFLCSDCSSENDANRSLNPFPV
KAG6404799.1 hypothetical protein SASPL_132375 [Salvia splendens]2.3e-1080.43Show/hide
Query:  CELVVE-FHPSSMRMAIEEAKKLDHFLCSDCSSENDANRSLNPFPV
        C LV+E FHPS M MAIEEAKKLDHFLCSDCSS++DA RSLN FPV
Subjt:  CELVVE-FHPSSMRMAIEEAKKLDHFLCSDCSSENDANRSLNPFPV
THU70241.1 hypothetical protein C4D60_Mb08t22950 [Musa balbisiana]1.5e-0974.42Show/hide
Query:  ELVVEFHPSSMRMAIEEAKKLDHFLCSDCSSENDANRSLNPFP
        +L+V+FHPS M M IE+AKKLDHFLCSDC SENDA RS+N FP
Subjt:  ELVVEFHPSSMRMAIEEAKKLDHFLCSDCSSENDANRSLNPFP
TYK20327.1 protein mlo2-like isoform X2 [Cucumis melo var. makuwa]1.5e-0963.16Show/hide
Query:  LSYGNHLMSILCELVVE-FHPSSMRMAIEEAKKLDHFLCSDCSSENDANRSLNPFPV
        +  G   + + CE   + FHPS M M IEEAKKLDHFLCSDCSSEN+A RSLN FPV
Subjt:  LSYGNHLMSILCELVVE-FHPSSMRMAIEEAKKLDHFLCSDCSSENDANRSLNPFPV
XP_022136260.1 chromatin remodeling protein EBS-like [Momordica charantia]6.7e-1087.18Show/hide
Query:  FHPSSMRMAIEEAKKLDHFLCSDCSSENDANRSLNPFPV
        FHPS M M IEEAKKLDHFLCSDCSSENDA RSLN FPV
Subjt:  FHPSSMRMAIEEAKKLDHFLCSDCSSENDANRSLNPFPV
TrEMBL top hitse value%identityAlignment
A0A4D9A9T3 Serine/threonine-protein phosphatase 2A regulatory subunit B1.1e-1080.43Show/hide
Query:  CELVVE-FHPSSMRMAIEEAKKLDHFLCSDCSSENDANRSLNPFPV
        C LV+E FHPS M MAIEEAKKLDHFLCSDCSS++DA RSLN FPV
Subjt:  CELVVE-FHPSSMRMAIEEAKKLDHFLCSDCSSENDANRSLNPFPV
A0A5A7TH97 Protein mlo2-like isoform X27.2e-1063.16Show/hide
Query:  LSYGNHLMSILCELVVE-FHPSSMRMAIEEAKKLDHFLCSDCSSENDANRSLNPFPV
        +  G   + + CE   + FHPS M M IEEAKKLDHFLCSDCSSEN+A RSLN FPV
Subjt:  LSYGNHLMSILCELVVE-FHPSSMRMAIEEAKKLDHFLCSDCSSENDANRSLNPFPV
A0A5A7UF44 Protein mlo2-like isoform X22.5e-1069.39Show/hide
Query:  MSILCELVVEFHPSSMRMAIEEAKKLDHFLCSDCSSENDANRSLNPFPV
        + +L + +  FHPS M M IEEAKKLDHFLCSDCSS+N+ANRSLN FPV
Subjt:  MSILCELVVEFHPSSMRMAIEEAKKLDHFLCSDCSSENDANRSLNPFPV
A0A5D3D9S2 Protein mlo2-like isoform X27.2e-1063.16Show/hide
Query:  LSYGNHLMSILCELVVE-FHPSSMRMAIEEAKKLDHFLCSDCSSENDANRSLNPFPV
        +  G   + + CE   + FHPS M M IEEAKKLDHFLCSDCSSEN+A RSLN FPV
Subjt:  LSYGNHLMSILCELVVE-FHPSSMRMAIEEAKKLDHFLCSDCSSENDANRSLNPFPV
A0A6J1C3E6 chromatin remodeling protein EBS-like3.2e-1087.18Show/hide
Query:  FHPSSMRMAIEEAKKLDHFLCSDCSSENDANRSLNPFPV
        FHPS M M IEEAKKLDHFLCSDCSSENDA RSLN FPV
Subjt:  FHPSSMRMAIEEAKKLDHFLCSDCSSENDANRSLNPFPV
SwissProt top hitse value%identityAlignment
F4JL28 Chromatin remodeling protein EBS1.2e-0656.76Show/hide
Query:  FHPSSMRMAIEEAKKLDHFLCSDCSSENDANRSLNPF
        +HP+ + M IEEAKKLDHF+C++CSS++D  +S N F
Subjt:  FHPSSMRMAIEEAKKLDHFLCSDCSSENDANRSLNPF
Arabidopsis top hitse value%identityAlignment
AT4G22140.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein8.7e-0856.76Show/hide
Query:  FHPSSMRMAIEEAKKLDHFLCSDCSSENDANRSLNPF
        +HP+ + M IEEAKKLDHF+C++CSS++D  +S N F
Subjt:  FHPSSMRMAIEEAKKLDHFLCSDCSSENDANRSLNPF
AT4G22140.2 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein8.7e-0856.76Show/hide
Query:  FHPSSMRMAIEEAKKLDHFLCSDCSSENDANRSLNPF
        +HP+ + M IEEAKKLDHF+C++CSS++D  +S N F
Subjt:  FHPSSMRMAIEEAKKLDHFLCSDCSSENDANRSLNPF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTACGCCGATAGTGATTCCAACAATTCATGGGCGAACAACAGGGAGGAGGGTCTTCGAACTCTTAGTTATGGTAACCACTTGATGTCTATACTTTGTGAACTTGT
TGTTGAGTTTCATCCATCAAGCATGAGAATGGCCATTGAAGAAGCAAAGAAGTTGGATCACTTTTTGTGTTCAGATTGTTCATCAGAAAATGATGCCAATAGGTCCTTGA
ATCCTTTTCCAGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCTACGCCGATAGTGATTCCAACAATTCATGGGCGAACAACAGGGAGGAGGGTCTTCGAACTCTTAGTTATGGTAACCACTTGATGTCTATACTTTGTGAACTTGT
TGTTGAGTTTCATCCATCAAGCATGAGAATGGCCATTGAAGAAGCAAAGAAGTTGGATCACTTTTTGTGTTCAGATTGTTCATCAGAAAATGATGCCAATAGGTCCTTGA
ATCCTTTTCCAGTATAG
Protein sequenceShow/hide protein sequence
MVYADSDSNNSWANNREEGLRTLSYGNHLMSILCELVVEFHPSSMRMAIEEAKKLDHFLCSDCSSENDANRSLNPFPV