; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0012460 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012460
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr1:41264069..41264829
RNA-Seq ExpressionLag0012460
SyntenyLag0012460
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.8e-3036.41Show/hide
Query:  IGRVFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINIFSNEVLQVEGYDDGFALTTVISGLQDERMLNSIGESQPWTYAEFMTRAQRYISVEELLRSK
        + R FVTQF+G R R +P   LLT+KQ   ESL+DY+  F+ E LQVEG  D  +L   +SG++DE +  S G+  P T++E ++RAQRY+S  E   SK
Subjt:  IGRVFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINIFSNEVLQVEGYDDGFALTTVISGLQDERMLNSIGESQPWTYAEFMTRAQRYISVEELLRSK

Query:  QEEREAEAGKSSPQPMAEADQRLGSLGVGQNQK----------------------------------PEKLRSDPDRRNQNKYCMFHGDHGHTTQECIQL
           RE +  ++ P+     D+  GS    +++                                   PE++++   +R++ +YC+FH DHGH TQ+C  L
Subjt:  QEEREAEAGKSSPQPMAEADQRLGSLGVGQNQK----------------------------------PEKLRSDPDRRNQNKYCMFHGDHGHTTQECIQL

Query:  RDEIEALIREGYLKEFV
        ++E+E LIR GYLKE+V
Subjt:  RDEIEALIREGYLKEFV

XP_024024428.1 uncharacterized protein LOC112092448 [Morus notabilis]8.4e-2840.21Show/hide
Query:  FVTQFLGARSRQKPQINLLTVKQGPRESLKDYINIFSNEVLQVEGYDDGFALTTVISGL-QDERMLNSIGESQPWTYAEFMTRAQRYISVEELLR-----
        F+TQF+G +    P+ NL  V QGP ESLKD+I  F  +V   EG  D  AL   +S + +D      +G   P  Y EF+TRAQ +I+ EE  +     
Subjt:  FVTQFLGARSRQKPQINLLTVKQGPRESLKDYINIFSNEVLQVEGYDDGFALTTVISGL-QDERMLNSIGESQPWTYAEFMTRAQRYISVEELLR-----

Query:  ----SKQEEREAEAGKSSPQPMAEADQRLGSLGVGQNQKPEKLRSDPDRRNQNKYCMFHGDHGHTTQECIQLRDEIEALIREGYLKEFVGNDRS
            +K+E R+A +  +  +       +     +   ++P  L+SDP RRNQNKYC FHG+ GHTT EC  LRDE+E LIREG L E+  + R+
Subjt:  ----SKQEEREAEAGKSSPQPMAEADQRLGSLGVGQNQKPEKLRSDPDRRNQNKYCMFHGDHGHTTQECIQLRDEIEALIREGYLKEFVGNDRS

XP_024041095.1 uncharacterized protein LOC112098853 [Citrus clementina]2.9e-2835.65Show/hide
Query:  IGRVFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINIFSNEVLQVEGYDDGFALTTVISGLQDERMLNSIGESQPWTYAEFMTRAQRYISVEELLRSK
        + R F + F  AR R KP   LLTVKQ   E+L+DYI  ++NE+ QV+GYDDG AL+ ++ GL+  ++  S+ +  P +Y+E + RA++Y + EE  +++
Subjt:  IGRVFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINIFSNEVLQVEGYDDGFALTTVISGLQDERMLNSIGESQPWTYAEFMTRAQRYISVEELLRSK

Query:  -QEEREAEAGKSSPQPMAE-----ADQ--------------------RLGS-------LGVGQNQ------------KPEKLRSDPDRRNQNKYCMFHGD
         QE+ E+  GK       E      DQ                    RL S       L   + Q             P  ++++P RRN NKYC FH D
Subjt:  -QEEREAEAGKSSPQPMAE-----ADQ--------------------RLGS-------LGVGQNQ------------KPEKLRSDPDRRNQNKYCMFHGD

Query:  HGHTTQECIQLRDEIEALIREGYLKEFVGN
        HGH T EC +L+++IE+L+R+G L+E+V N
Subjt:  HGHTTQECIQLRDEIEALIREGYLKEFVGN

XP_030958629.1 uncharacterized protein LOC115980536 [Quercus lobata]1.1e-2733.05Show/hide
Query:  PSLRANTHRIGRVFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINIFSNEVLQVEGYDDGFALTTVISGLQDERMLNSIGESQPWTYAEFMTRAQRYI
        PS  +    + ++FV  F+G +  ++   +LLT++QG  ESL+ +I  F+ E L V+  DD   L    +G+  +  ++ + E +P T AE +  AQ ++
Subjt:  PSLRANTHRIGRVFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINIFSNEVLQVEGYDDGFALTTVISGLQDERMLNSIGESQPWTYAEFMTRAQRYI

Query:  SVEELLRSKQEER-------EAEAGKSSPQP-------MAEAD-QRLGSLGVGQN---------------------QKPEKLRSDPDRRNQNKYCMFHGD
        + E+ + +K+ +R        A   + +P+P         E D ++ G LG  QN                     + PEK++ DP++RN+NKYC FH D
Subjt:  SVEELLRSKQEER-------EAEAGKSSPQP-------MAEAD-QRLGSLGVGQN---------------------QKPEKLRSDPDRRNQNKYCMFHGD

Query:  HGHTTQECIQLRDEIEALIREGYLKEFVGNDRS
        HGH T EC  L+ +IE LIR+G LK FVG DR+
Subjt:  HGHTTQECIQLRDEIEALIREGYLKEFVGNDRS

XP_030958631.1 uncharacterized protein LOC115980538 [Quercus lobata]1.1e-2733.05Show/hide
Query:  PSLRANTHRIGRVFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINIFSNEVLQVEGYDDGFALTTVISGLQDERMLNSIGESQPWTYAEFMTRAQRYI
        PS  +    + ++FV  F+G +  ++   +LLT++QG  ESL+ +I  F+ E L V+  DD   L    +G+  +  ++ + E +P T AE +  AQ ++
Subjt:  PSLRANTHRIGRVFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINIFSNEVLQVEGYDDGFALTTVISGLQDERMLNSIGESQPWTYAEFMTRAQRYI

Query:  SVEELLRSKQEER-------EAEAGKSSPQP-------MAEAD-QRLGSLGVGQN---------------------QKPEKLRSDPDRRNQNKYCMFHGD
        + E+ + +K+ +R        A   + +P+P         E D ++ G LG  QN                     + PEK++ DP++RN+NKYC FH D
Subjt:  SVEELLRSKQEER-------EAEAGKSSPQP-------MAEAD-QRLGSLGVGQN---------------------QKPEKLRSDPDRRNQNKYCMFHGD

Query:  HGHTTQECIQLRDEIEALIREGYLKEFVGNDRS
        HGH T EC  L+ +IE LIR+G LK FVG DR+
Subjt:  HGHTTQECIQLRDEIEALIREGYLKEFVGNDRS

TrEMBL top hitse value%identityAlignment
A0A2N9HV64 Ribonuclease H5.0e-2635.55Show/hide
Query:  VPSLRANTHRIGRVFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINIFSNEVLQVEGYDDGFALTTVISGLQDERMLNSIGESQPWTYAEFMTRAQRY
        +P    +  ++ R F   F+G +   +P  +LL V+Q   E+L+ Y+  F+ E L V+G DD   LT  ISGLQ    L S+ +  P + +E M  AQRY
Subjt:  VPSLRANTHRIGRVFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINIFSNEVLQVEGYDDGFALTTVISGLQDERMLNSIGESQPWTYAEFMTRAQRY

Query:  ISVEELL---------RSKQEEREAEAGKSSPQPMAEADQRLGSLGVGQNQK-----PEKLRSDPDRRNQNKYCMFHGDHGHTTQECIQLRDEIEALIRE
        ++ E+ L         R+   +R  E  +S P+   E+  R    G+  +Q      P KL ++PDRR ++KYC FH DHGH T++C  L+ +IE LI++
Subjt:  ISVEELL---------RSKQEEREAEAGKSSPQPMAEADQRLGSLGVGQNQK-----PEKLRSDPDRRNQNKYCMFHGDHGHTTQECIQLRDEIEALIRE

Query:  GYLKEFVGNDR
        G L+ FV  D+
Subjt:  GYLKEFVGNDR

A0A6J1DWY0 uncharacterized protein LOC1110252938.8e-3136.41Show/hide
Query:  IGRVFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINIFSNEVLQVEGYDDGFALTTVISGLQDERMLNSIGESQPWTYAEFMTRAQRYISVEELLRSK
        + R FVTQF+G R R +P   LLT+KQ   ESL+DY+  F+ E LQVEG  D  +L   +SG++DE +  S G+  P T++E ++RAQRY+S  E   SK
Subjt:  IGRVFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINIFSNEVLQVEGYDDGFALTTVISGLQDERMLNSIGESQPWTYAEFMTRAQRYISVEELLRSK

Query:  QEEREAEAGKSSPQPMAEADQRLGSLGVGQNQK----------------------------------PEKLRSDPDRRNQNKYCMFHGDHGHTTQECIQL
           RE +  ++ P+     D+  GS    +++                                   PE++++   +R++ +YC+FH DHGH TQ+C  L
Subjt:  QEEREAEAGKSSPQPMAEADQRLGSLGVGQNQK----------------------------------PEKLRSDPDRRNQNKYCMFHGDHGHTTQECIQL

Query:  RDEIEALIREGYLKEFV
        ++E+E LIR GYLKE+V
Subjt:  RDEIEALIREGYLKEFV

A0A6J1DYL6 uncharacterized protein LOC1110257856.5e-2634.84Show/hide
Query:  IGRVFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINIFSNEVLQVEGYDDGFALTTVISGLQDERMLNSIGESQPWTYAEFMTRAQRYISVEELLRSK
        + R FVTQF+G R R +P   LLT+KQ   ESL DY+  F+ E LQ+E   D  +L   +SG++DE +  S G+  P T++E ++RAQRY+S  E   SK
Subjt:  IGRVFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINIFSNEVLQVEGYDDGFALTTVISGLQDERMLNSIGESQPWTYAEFMTRAQRYISVEELLRSK

Query:  Q-----------------------EEREAEAGKSSPQP---------------MAEADQRLGSLGVGQNQKPEKLRSDPDRRNQNKYCMFHGDHGHTTQE
        +                       E+R+  + K  P+                M   DQRL        + PE+++    +R++ +YC+FH DH H TQ+
Subjt:  Q-----------------------EEREAEAGKSSPQP---------------MAEADQRLGSLGVGQNQKPEKLRSDPDRRNQNKYCMFHGDHGHTTQE

Query:  CIQLRDEIEALIREGYLKEFV
           L++E+E LIR GYL+E+V
Subjt:  CIQLRDEIEALIREGYLKEFV

A0A7J0E059 Uncharacterized protein2.5e-2534.05Show/hide
Query:  IGRVFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINIFSNEVLQVEGYDDGFALTTVISGLQDERMLNSIGESQPWTYAEFMTRAQRYISVEELLRSK
        + R+FV  F+  R+RQK   +L TV +   ESLKD++  F+  +L+VE   D   +  ++ GL+   + +S+ ++ P T +   ++A +YI+VEEL  +K
Subjt:  IGRVFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINIFSNEVLQVEGYDDGFALTTVISGLQDERMLNSIGESQPWTYAEFMTRAQRYISVEELLRSK

Query:  QEEREAEAGKSSPQPMAEADQRLGSLGVGQNQKPEKLRSDPDRRNQNKYCMFHGDHGHTTQECIQLRDEIEALIREGYLKEFVGN
        + +R  +  K         D R  +      + P K+++DP +RN NKYC F+ DHGH T  C QL+++I   I+ GYL+++V +
Subjt:  QEEREAEAGKSSPQPMAEADQRLGSLGVGQNQKPEKLRSDPDRRNQNKYCMFHGDHGHTTQECIQLRDEIEALIREGYLKEFVGN

A0A7J0G2N3 Cytochrome P450, family 72, subfamily A, polypeptide 94.2e-2534.76Show/hide
Query:  IGRVFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINIFSNEVLQVEGYDDGFALTTVISGLQDERMLNSIGESQPWTYAEFMTRAQRYISVEELLRSK
        + R+F   F+  R RQK   +L T+ Q  RESLKDY+  F+  VL+VE  +D   + T++ GL+   + +S+ ++ P T +   ++A +YI++EEL+ +K
Subjt:  IGRVFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINIFSNEVLQVEGYDDGFALTTVISGLQDERMLNSIGESQPWTYAEFMTRAQRYISVEELLRSK

Query:  QEEREAEAGKSSPQPMAEADQRLGSLGVGQNQK----PEKLRSDPDRRNQNKYCMFHGDHGHTTQECIQLRDEIEALIREGYLKEFV
        +  R  +  K       ++D R   L   +N+     PEK++++P +RN+N+YC F  DHGH T++C QL ++I  LI+  YL++++
Subjt:  QEEREAEAGKSSPQPMAEADQRLGSLGVGQNQK----PEKLRSDPDRRNQNKYCMFHGDHGHTTQECIQLRDEIEALIREGYLKEFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAAAGACGAAGCGACAAGGTGCCGAGCCTTCGCGCTAACACTCACAGAATTGGCCGAGTGTTTGTTACGCAATTCCTCGGGGCCCGGAGCCGACAGAAGCCTCA
GATCAATTTGCTAACAGTAAAGCAGGGGCCTCGAGAAAGCTTGAAGGATTATATTAACATATTTAGTAACGAAGTTTTGCAGGTAGAAGGCTATGACGATGGATTTGCCT
TGACTACTGTGATTTCAGGTCTGCAGGATGAAAGAATGCTCAACTCGATCGGTGAGAGCCAGCCATGGACATACGCGGAATTCATGACCCGAGCACAAAGGTACATAAGC
GTCGAGGAACTGCTGAGGTCCAAACAAGAAGAGAGAGAGGCCGAAGCCGGCAAGAGCAGTCCTCAGCCAATGGCCGAGGCCGACCAGAGACTAGGGAGCCTCGGAGTCGG
GCAGAACCAAAAGCCAGAAAAATTGAGGTCGGACCCAGACAGAAGGAATCAGAACAAGTACTGCATGTTTCACGGAGACCACGGTCACACAACCCAGGAATGCATACAGT
TGAGGGACGAGATAGAAGCCCTAATCCGAGAGGGTTACCTCAAGGAGTTTGTGGGGAATGACAGAAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAAAGACGAAGCGACAAGGTGCCGAGCCTTCGCGCTAACACTCACAGAATTGGCCGAGTGTTTGTTACGCAATTCCTCGGGGCCCGGAGCCGACAGAAGCCTCA
GATCAATTTGCTAACAGTAAAGCAGGGGCCTCGAGAAAGCTTGAAGGATTATATTAACATATTTAGTAACGAAGTTTTGCAGGTAGAAGGCTATGACGATGGATTTGCCT
TGACTACTGTGATTTCAGGTCTGCAGGATGAAAGAATGCTCAACTCGATCGGTGAGAGCCAGCCATGGACATACGCGGAATTCATGACCCGAGCACAAAGGTACATAAGC
GTCGAGGAACTGCTGAGGTCCAAACAAGAAGAGAGAGAGGCCGAAGCCGGCAAGAGCAGTCCTCAGCCAATGGCCGAGGCCGACCAGAGACTAGGGAGCCTCGGAGTCGG
GCAGAACCAAAAGCCAGAAAAATTGAGGTCGGACCCAGACAGAAGGAATCAGAACAAGTACTGCATGTTTCACGGAGACCACGGTCACACAACCCAGGAATGCATACAGT
TGAGGGACGAGATAGAAGCCCTAATCCGAGAGGGTTACCTCAAGGAGTTTGTGGGGAATGACAGAAGCTAG
Protein sequenceShow/hide protein sequence
MAKRRSDKVPSLRANTHRIGRVFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINIFSNEVLQVEGYDDGFALTTVISGLQDERMLNSIGESQPWTYAEFMTRAQRYIS
VEELLRSKQEEREAEAGKSSPQPMAEADQRLGSLGVGQNQKPEKLRSDPDRRNQNKYCMFHGDHGHTTQECIQLRDEIEALIREGYLKEFVGNDRS