; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0012462 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012462
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionglycine-rich protein 23-like
Genome locationchr1:41295044..41295679
RNA-Seq ExpressionLag0012462
SyntenyLag0012462
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595345.1 hypothetical protein SDJN03_11898, partial [Cucurbita argyrosperma subsp. sororia]5.4e-3056.3Show/hide
Query:  MVRTAYIVLPIFGVSFVSVAIFLLYVVCRRKVSKEKATTERRSRRYVEGGNRIGIVVDDGSYVGTCTTFSGGYGGWGWDWTFSTVGDTGNGN-NVGGGCD
        MVRTAYIVLPI G   +S  + L  ++CRR+VSK  A+  R+S  YVEGGNRIGIVVDDGSYVGT   F+GGYGGWGWDWTFS+VGDTGNGN N GGGCD
Subjt:  MVRTAYIVLPIFGVSFVSVAIFLLYVVCRRKVSKEKATTERRSRRYVEGGNRIGIVVDDGSYVGTCTTFSGGYGGWGWDWTFSTVGDTGNGN-NVGGGCD

Query:  VGGGGD-----------------GGGGGDSGGGGNSEVGGGNGGLSGGIGDSGGDGG----DGGGASFHYVG-----SGGVSSHDGGGGGGSGGLSGGTG
        VGGGG                  G G GD  G    E GGG GG++    + GG GG     GGG SFH  G      GGVSSH GGGGG S        
Subjt:  VGGGGD-----------------GGGGGDSGGGGNSEVGGGNGGLSGGIGDSGGDGG----DGGGASFHYVG-----SGGVSSHDGGGGGGSGGLSGGTG

Query:  DTGGDGGDGGGGGGFSDSGGGGGGGGFDFGGGGGSSFW
               D GGGGG SD   GGGGGG+DFGG GGSSFW
Subjt:  DTGGDGGDGGGGGGFSDSGGGGGGGGFDFGGGGGSSFW

XP_022931867.1 glycine-rich protein 23-like [Cucurbita moschata]3.2e-3056.3Show/hide
Query:  MVRTAYIVLPIFGVSFVSVAIFLLYVVCRRKVSKEKATTERRSRRYVEGGNRIGIVVDDGSYVGTCTTFSGGYGGWGWDWTFSTVGDTGNGN-NVGGGCD
        MVRTAYIVLPI G   +   + L  ++CRR+VSK  A+  R+S  YVEGGNRIGIVVDDGSYVGT   F+GGYGGWGWDWTFS+VGDTGNGN N GGGCD
Subjt:  MVRTAYIVLPIFGVSFVSVAIFLLYVVCRRKVSKEKATTERRSRRYVEGGNRIGIVVDDGSYVGTCTTFSGGYGGWGWDWTFSTVGDTGNGN-NVGGGCD

Query:  VGGGGD-----------------GGGGGDSGGGGNSEVGGGNGGLSGGIGDSGGDGGD----GGGASFHYVG-----SGGVSSHDGGGGGGSGGLSGGTG
        VGGGG                  G G GD  G    E GGG+GG++    + GG GG     GGG SFH  G      GGVSSH GGGGG S        
Subjt:  VGGGGD-----------------GGGGGDSGGGGNSEVGGGNGGLSGGIGDSGGDGGD----GGGASFHYVG-----SGGVSSHDGGGGGGSGGLSGGTG

Query:  DTGGDGGDGGGGGGFSDSGGGGGGGGFDFGGGGGSSFW
               D GGGGG SD   GGGGGG+DFGGGGGSSFW
Subjt:  DTGGDGGDGGGGGGFSDSGGGGGGGGFDFGGGGGSSFW

XP_022966633.1 loricrin-like [Cucurbita maxima]1.9e-2257.14Show/hide
Query:  IFLLYVVCRRKVSKEKATTERRSRRYVEGGNRIGIVVDDGSYVGTCTTFSGGYGGWGWDWTFSTVGDTGNGNNVGGGCDVGGGGD---------------
        + L  ++CRR+VSK  A+  R+S  YVEGGNRIGIVVDDGSYVGT   F+GGYGGWGWDWTFS+VGDTGNGN+ GGGCDVGGGG                
Subjt:  IFLLYVVCRRKVSKEKATTERRSRRYVEGGNRIGIVVDDGSYVGTCTTFSGGYGGWGWDWTFSTVGDTGNGNNVGGGCDVGGGGD---------------

Query:  --GGGGGDSGGGGNSEVGGGNGGLSGGIGDSGGDGG----DGGGASFHYVG-----SGGVSSHDGGGGGGSGGLSGGTGDTGGDGGDGGGGGGFSDSGGG
          G G GD  G    E GGG+GG++    + GG GG     GGG SFH  G      GG SSH GGG G S    GG    GG   D GGGGG SD   G
Subjt:  --GGGGGDSGGGGNSEVGGGNGGLSGGIGDSGGDGG----DGGGASFHYVG-----SGGVSSHDGGGGGGSGGLSGGTGDTGGDGGDGGGGGGFSDSGGG

Query:  GGGGGFDFGGGGGSSFW
        GGGGGFDFGGGGGSSFW
Subjt:  GGGGGFDFGGGGGSSFW

XP_023518097.1 glycine-rich protein 5-like [Cucurbita pepo subsp. pepo]5.1e-2056.42Show/hide
Query:  IFLLYVVCRRKVSKEKATTERRSRRYVEGGNRIGIVVDDGSYVGTCTTFSGGYGGWGWDWTFSTVGDTGNGNNVG-GGCDVGGGGD----GG--------
        + L  ++CRR+VSK   +  R+S   VEGGNR+GIVVDDGSYVGT   F+GGYGGWGWDWTFS+VGD+GNGN  G GGCDVGGGG     GG        
Subjt:  IFLLYVVCRRKVSKEKATTERRSRRYVEGGNRIGIVVDDGSYVGTCTTFSGGYGGWGWDWTFSTVGDTGNGNNVG-GGCDVGGGGD----GG--------

Query:  -----GGGDSGGGGNSEVGGGNGGLSGGIGDSGGDGG----DGGGASFHYVG-----SGGVSSHDGGGGGGSGGLSGGTGDTGGDGGDGGGGGGFSDSGG
             G GD  G    E GGG+GG++    + GG GG     GGG SFH  G      GGVSSH GGGGGG+    GG G  GG   D GGGGG SD   
Subjt:  -----GGGDSGGGGNSEVGGGNGGLSGGIGDSGGDGG----DGGGASFHYVG-----SGGVSSHDGGGGGGSGGLSGGTGDTGGDGGDGGGGGGFSDSGG

Query:  GGGGGGFDFGGGGGSSFW
        GGGGGG+DFGGGGGSSFW
Subjt:  GGGGGGFDFGGGGGSSFW

TrEMBL top hitse value%identityAlignment
A0A6J1EUX9 glycine-rich protein 23-like1.5e-3056.3Show/hide
Query:  MVRTAYIVLPIFGVSFVSVAIFLLYVVCRRKVSKEKATTERRSRRYVEGGNRIGIVVDDGSYVGTCTTFSGGYGGWGWDWTFSTVGDTGNGN-NVGGGCD
        MVRTAYIVLPI G   +   + L  ++CRR+VSK  A+  R+S  YVEGGNRIGIVVDDGSYVGT   F+GGYGGWGWDWTFS+VGDTGNGN N GGGCD
Subjt:  MVRTAYIVLPIFGVSFVSVAIFLLYVVCRRKVSKEKATTERRSRRYVEGGNRIGIVVDDGSYVGTCTTFSGGYGGWGWDWTFSTVGDTGNGN-NVGGGCD

Query:  VGGGGD-----------------GGGGGDSGGGGNSEVGGGNGGLSGGIGDSGGDGGD----GGGASFHYVG-----SGGVSSHDGGGGGGSGGLSGGTG
        VGGGG                  G G GD  G    E GGG+GG++    + GG GG     GGG SFH  G      GGVSSH GGGGG S        
Subjt:  VGGGGD-----------------GGGGGDSGGGGNSEVGGGNGGLSGGIGDSGGDGGD----GGGASFHYVG-----SGGVSSHDGGGGGGSGGLSGGTG

Query:  DTGGDGGDGGGGGGFSDSGGGGGGGGFDFGGGGGSSFW
               D GGGGG SD   GGGGGG+DFGGGGGSSFW
Subjt:  DTGGDGGDGGGGGGFSDSGGGGGGGGFDFGGGGGSSFW

A0A6J1HSN5 loricrin-like9.0e-2357.14Show/hide
Query:  IFLLYVVCRRKVSKEKATTERRSRRYVEGGNRIGIVVDDGSYVGTCTTFSGGYGGWGWDWTFSTVGDTGNGNNVGGGCDVGGGGD---------------
        + L  ++CRR+VSK  A+  R+S  YVEGGNRIGIVVDDGSYVGT   F+GGYGGWGWDWTFS+VGDTGNGN+ GGGCDVGGGG                
Subjt:  IFLLYVVCRRKVSKEKATTERRSRRYVEGGNRIGIVVDDGSYVGTCTTFSGGYGGWGWDWTFSTVGDTGNGNNVGGGCDVGGGGD---------------

Query:  --GGGGGDSGGGGNSEVGGGNGGLSGGIGDSGGDGG----DGGGASFHYVG-----SGGVSSHDGGGGGGSGGLSGGTGDTGGDGGDGGGGGGFSDSGGG
          G G GD  G    E GGG+GG++    + GG GG     GGG SFH  G      GG SSH GGG G S    GG    GG   D GGGGG SD   G
Subjt:  --GGGGGDSGGGGNSEVGGGNGGLSGGIGDSGGDGG----DGGGASFHYVG-----SGGVSSHDGGGGGGSGGLSGGTGDTGGDGGDGGGGGGFSDSGGG

Query:  GGGGGFDFGGGGGSSFW
        GGGGGFDFGGGGGSSFW
Subjt:  GGGGGFDFGGGGGSSFW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCGAACAGCATACATTGTGTTGCCCATTTTTGGGGTTTCTTTTGTTTCTGTCGCTATATTTCTGTTGTATGTGGTTTGCCGGAGGAAAGTTTCAAAGGAAAAAGC
TACCACTGAGAGAAGAAGTCGAAGATATGTTGAAGGTGGAAATAGAATTGGCATAGTTGTGGATGATGGGAGTTATGTGGGTACATGCACCACGTTTTCGGGCGGTTATG
GAGGTTGGGGTTGGGATTGGACTTTTAGTACTGTAGGAGATACAGGCAACGGCAACAACGTTGGAGGAGGCTGTGATGTCGGAGGTGGCGGTGATGGCGGAGGTGGTGGG
GATTCTGGTGGTGGAGGGAATAGTGAGGTTGGAGGTGGAAATGGTGGCCTTAGTGGAGGAATAGGTGATAGCGGAGGCGATGGCGGAGATGGCGGTGGAGCTAGTTTTCA
CTACGTAGGCAGTGGTGGAGTGAGTTCTCACGACGGAGGAGGCGGAGGTGGAAGTGGTGGCCTTAGTGGAGGAACAGGTGATACTGGAGGCGATGGTGGAGATGGCGGTG
GTGGTGGAGGGTTTTCTGATTCTGGAGGTGGTGGAGGGGGAGGGGGTTTTGATTTTGGAGGTGGTGGAGGATCATCTTTCTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCGAACAGCATACATTGTGTTGCCCATTTTTGGGGTTTCTTTTGTTTCTGTCGCTATATTTCTGTTGTATGTGGTTTGCCGGAGGAAAGTTTCAAAGGAAAAAGC
TACCACTGAGAGAAGAAGTCGAAGATATGTTGAAGGTGGAAATAGAATTGGCATAGTTGTGGATGATGGGAGTTATGTGGGTACATGCACCACGTTTTCGGGCGGTTATG
GAGGTTGGGGTTGGGATTGGACTTTTAGTACTGTAGGAGATACAGGCAACGGCAACAACGTTGGAGGAGGCTGTGATGTCGGAGGTGGCGGTGATGGCGGAGGTGGTGGG
GATTCTGGTGGTGGAGGGAATAGTGAGGTTGGAGGTGGAAATGGTGGCCTTAGTGGAGGAATAGGTGATAGCGGAGGCGATGGCGGAGATGGCGGTGGAGCTAGTTTTCA
CTACGTAGGCAGTGGTGGAGTGAGTTCTCACGACGGAGGAGGCGGAGGTGGAAGTGGTGGCCTTAGTGGAGGAACAGGTGATACTGGAGGCGATGGTGGAGATGGCGGTG
GTGGTGGAGGGTTTTCTGATTCTGGAGGTGGTGGAGGGGGAGGGGGTTTTGATTTTGGAGGTGGTGGAGGATCATCTTTCTGGTGA
Protein sequenceShow/hide protein sequence
MVRTAYIVLPIFGVSFVSVAIFLLYVVCRRKVSKEKATTERRSRRYVEGGNRIGIVVDDGSYVGTCTTFSGGYGGWGWDWTFSTVGDTGNGNNVGGGCDVGGGGDGGGGG
DSGGGGNSEVGGGNGGLSGGIGDSGGDGGDGGGASFHYVGSGGVSSHDGGGGGGSGGLSGGTGDTGGDGGDGGGGGGFSDSGGGGGGGGFDFGGGGGSSFW