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Lag0012468 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012468
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionnucleolar complex protein 2 homolog
Genome locationchr1:41340787..41342025
RNA-Seq ExpressionLag0012468
SyntenyLag0012468
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0005654 - nucleoplasm (cellular component)
GO:0005730 - nucleolus (cellular component)
GO:0030690 - Noc1p-Noc2p complex (cellular component)
GO:0030691 - Noc2p-Noc3p complex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008460604.1 PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis melo]4.3e-2052.71Show/hide
Query:  MIGETRHLKGKQSVISAKPTMTS--SAANGDNNTEN-QQDKSASPPGHTVIVLTKVPSVKGRRREKGGG--RGNIKCQGEDRCTVQS-------------
        MIGETRHLKGKQSVIS KP + +  ++AN  NNTEN Q  + A+P  HTV VLTK P V+G+ R +G G  RG+IK QG   C  QS             
Subjt:  MIGETRHLKGKQSVISAKPTMTS--SAANGDNNTEN-QQDKSASPPGHTVIVLTKVPSVKGRRREKGGG--RGNIKCQGEDRCTVQS-------------

Query:  DSTPTTLHLNNGCDRQLHQKDADVATMLE
         STP +L  NN  DRQLH KDA+V TM+E
Subjt:  DSTPTTLHLNNGCDRQLHQKDADVATMLE

XP_011654504.1 serine/threonine-protein phosphatase 7 long form homolog isoform X1 [Cucumis sativus]1.2e-1751.56Show/hide
Query:  MIGETRHLKGKQSVISAKP-TMTSSAANGDNNTEN-QQDKSASPPGHTVIVLTKVPSVKGRRREKGGG--RGNIKCQGEDRCTVQS-------------D
        MIGETRHLKGKQSVIS KP T   S+ N  NNTEN Q  + ASP  HTV VLTK   V+G+ R +G G  RG+IK +G   C  QS              
Subjt:  MIGETRHLKGKQSVISAKP-TMTSSAANGDNNTEN-QQDKSASPPGHTVIVLTKVPSVKGRRREKGGG--RGNIKCQGEDRCTVQS-------------D

Query:  STPTTLHLNNGCDRQLHQKDADVATMLE
        ST  +L  NNG DRQLH +D +V TM+E
Subjt:  STPTTLHLNNGCDRQLHQKDADVATMLE

XP_022133964.1 nucleolar complex protein 2 homolog isoform X1 [Momordica charantia]6.9e-1874.65Show/hide
Query:  LEKCNNNVPFIQYYKSILDKSTSRNLALDKKFPGANKNKKKRQQLENDQIKSVGANGKVHSVKGKAKKKKT
        LEKCN+NVPFIQYYKSI+DK+ SRNL LDKKFPG NKNKKK++QL+N+QI+S  ANGK  S KG+AKK+KT
Subjt:  LEKCNNNVPFIQYYKSILDKSTSRNLALDKKFPGANKNKKKRQQLENDQIKSVGANGKVHSVKGKAKKKKT

XP_022133965.1 nucleolar complex protein 2 homolog isoform X2 [Momordica charantia]6.9e-1874.65Show/hide
Query:  LEKCNNNVPFIQYYKSILDKSTSRNLALDKKFPGANKNKKKRQQLENDQIKSVGANGKVHSVKGKAKKKKT
        LEKCN+NVPFIQYYKSI+DK+ SRNL LDKKFPG NKNKKK++QL+N+QI+S  ANGK  S KG+AKK+KT
Subjt:  LEKCNNNVPFIQYYKSILDKSTSRNLALDKKFPGANKNKKKRQQLENDQIKSVGANGKVHSVKGKAKKKKT

XP_031741301.1 serine/threonine-protein phosphatase 7 long form homolog isoform X2 [Cucumis sativus]1.2e-1751.56Show/hide
Query:  MIGETRHLKGKQSVISAKP-TMTSSAANGDNNTEN-QQDKSASPPGHTVIVLTKVPSVKGRRREKGGG--RGNIKCQGEDRCTVQS-------------D
        MIGETRHLKGKQSVIS KP T   S+ N  NNTEN Q  + ASP  HTV VLTK   V+G+ R +G G  RG+IK +G   C  QS              
Subjt:  MIGETRHLKGKQSVISAKP-TMTSSAANGDNNTEN-QQDKSASPPGHTVIVLTKVPSVKGRRREKGGG--RGNIKCQGEDRCTVQS-------------D

Query:  STPTTLHLNNGCDRQLHQKDADVATMLE
        ST  +L  NNG DRQLH +D +V TM+E
Subjt:  STPTTLHLNNGCDRQLHQKDADVATMLE

TrEMBL top hitse value%identityAlignment
A0A0A0KPN9 PMD domain-containing protein5.7e-1851.56Show/hide
Query:  MIGETRHLKGKQSVISAKP-TMTSSAANGDNNTEN-QQDKSASPPGHTVIVLTKVPSVKGRRREKGGG--RGNIKCQGEDRCTVQS-------------D
        MIGETRHLKGKQSVIS KP T   S+ N  NNTEN Q  + ASP  HTV VLTK   V+G+ R +G G  RG+IK +G   C  QS              
Subjt:  MIGETRHLKGKQSVISAKP-TMTSSAANGDNNTEN-QQDKSASPPGHTVIVLTKVPSVKGRRREKGGG--RGNIKCQGEDRCTVQS-------------D

Query:  STPTTLHLNNGCDRQLHQKDADVATMLE
        ST  +L  NNG DRQLH +D +V TM+E
Subjt:  STPTTLHLNNGCDRQLHQKDADVATMLE

A0A1S3CE15 serine/threonine-protein phosphatase 7 long form homolog2.1e-2052.71Show/hide
Query:  MIGETRHLKGKQSVISAKPTMTS--SAANGDNNTEN-QQDKSASPPGHTVIVLTKVPSVKGRRREKGGG--RGNIKCQGEDRCTVQS-------------
        MIGETRHLKGKQSVIS KP + +  ++AN  NNTEN Q  + A+P  HTV VLTK P V+G+ R +G G  RG+IK QG   C  QS             
Subjt:  MIGETRHLKGKQSVISAKPTMTS--SAANGDNNTEN-QQDKSASPPGHTVIVLTKVPSVKGRRREKGGG--RGNIKCQGEDRCTVQS-------------

Query:  DSTPTTLHLNNGCDRQLHQKDADVATMLE
         STP +L  NN  DRQLH KDA+V TM+E
Subjt:  DSTPTTLHLNNGCDRQLHQKDADVATMLE

A0A5A7UKT4 Serine/threonine-protein phosphatase 7 long form-like protein2.1e-2052.71Show/hide
Query:  MIGETRHLKGKQSVISAKPTMTS--SAANGDNNTEN-QQDKSASPPGHTVIVLTKVPSVKGRRREKGGG--RGNIKCQGEDRCTVQS-------------
        MIGETRHLKGKQSVIS KP + +  ++AN  NNTEN Q  + A+P  HTV VLTK P V+G+ R +G G  RG+IK QG   C  QS             
Subjt:  MIGETRHLKGKQSVISAKPTMTS--SAANGDNNTEN-QQDKSASPPGHTVIVLTKVPSVKGRRREKGGG--RGNIKCQGEDRCTVQS-------------

Query:  DSTPTTLHLNNGCDRQLHQKDADVATMLE
         STP +L  NN  DRQLH KDA+V TM+E
Subjt:  DSTPTTLHLNNGCDRQLHQKDADVATMLE

A0A6J1BWQ1 nucleolar complex protein 2 homolog isoform X23.3e-1874.65Show/hide
Query:  LEKCNNNVPFIQYYKSILDKSTSRNLALDKKFPGANKNKKKRQQLENDQIKSVGANGKVHSVKGKAKKKKT
        LEKCN+NVPFIQYYKSI+DK+ SRNL LDKKFPG NKNKKK++QL+N+QI+S  ANGK  S KG+AKK+KT
Subjt:  LEKCNNNVPFIQYYKSILDKSTSRNLALDKKFPGANKNKKKRQQLENDQIKSVGANGKVHSVKGKAKKKKT

A0A6J1BXF8 nucleolar complex protein 2 homolog isoform X13.3e-1874.65Show/hide
Query:  LEKCNNNVPFIQYYKSILDKSTSRNLALDKKFPGANKNKKKRQQLENDQIKSVGANGKVHSVKGKAKKKKT
        LEKCN+NVPFIQYYKSI+DK+ SRNL LDKKFPG NKNKKK++QL+N+QI+S  ANGK  S KG+AKK+KT
Subjt:  LEKCNNNVPFIQYYKSILDKSTSRNLALDKKFPGANKNKKKRQQLENDQIKSVGANGKVHSVKGKAKKKKT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGGAGAAACCCGACACCTCAAAGGGAAACAATCAGTCATTTCAGCTAAACCAACCATGACTTCGAGTGCTGCTAATGGTGATAACAATACAGAAAATCAACAGGA
CAAGAGTGCTTCTCCACCTGGACATACAGTGATAGTTTTAACCAAAGTTCCATCGGTCAAAGGACGACGAAGGGAAAAAGGCGGTGGCAGAGGCAACATCAAATGTCAAG
GTGAAGACCGTTGCACGGTCCAAAGTGATTCGACTCCAACAACTCTACATCTCAATAATGGTTGTGATAGACAATTGCATCAAAAAGACGCCGATGTTGCCACAATGCTA
GAGAAATGCAACAACAACGTTCCATTTATACAATATTACAAAAGCATATTGGACAAGTCTACATCCAGGAATTTGGCTCTAGATAAAAAGTTTCCTGGAGCCAACAAAAA
CAAAAAGAAAAGACAGCAGCTGGAAAACGACCAGATCAAATCGGTTGGCGCTAATGGGAAAGTACATTCAGTGAAGGGAAAAGCAAAAAAGAAGAAAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGGAGAAACCCGACACCTCAAAGGGAAACAATCAGTCATTTCAGCTAAACCAACCATGACTTCGAGTGCTGCTAATGGTGATAACAATACAGAAAATCAACAGGA
CAAGAGTGCTTCTCCACCTGGACATACAGTGATAGTTTTAACCAAAGTTCCATCGGTCAAAGGACGACGAAGGGAAAAAGGCGGTGGCAGAGGCAACATCAAATGTCAAG
GTGAAGACCGTTGCACGGTCCAAAGTGATTCGACTCCAACAACTCTACATCTCAATAATGGTTGTGATAGACAATTGCATCAAAAAGACGCCGATGTTGCCACAATGCTA
GAGAAATGCAACAACAACGTTCCATTTATACAATATTACAAAAGCATATTGGACAAGTCTACATCCAGGAATTTGGCTCTAGATAAAAAGTTTCCTGGAGCCAACAAAAA
CAAAAAGAAAAGACAGCAGCTGGAAAACGACCAGATCAAATCGGTTGGCGCTAATGGGAAAGTACATTCAGTGAAGGGAAAAGCAAAAAAGAAGAAAACTTGA
Protein sequenceShow/hide protein sequence
MIGETRHLKGKQSVISAKPTMTSSAANGDNNTENQQDKSASPPGHTVIVLTKVPSVKGRRREKGGGRGNIKCQGEDRCTVQSDSTPTTLHLNNGCDRQLHQKDADVATML
EKCNNNVPFIQYYKSILDKSTSRNLALDKKFPGANKNKKKRQQLENDQIKSVGANGKVHSVKGKAKKKKT