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Lag0012491 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012491
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionB-like cyclin
Genome locationchr1:41590462..41590951
RNA-Seq ExpressionLag0012491
SyntenyLag0012491
Gene Ontology termsGO:0007049 - cell cycle (biological process)
GO:0051301 - cell division (biological process)
InterPro domainsIPR006671 - Cyclin, N-terminal
IPR013763 - Cyclin-like
IPR036915 - Cyclin-like superfamily
IPR039361 - Cyclin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032667.1 putative cyclin-D7-1 [Cucumis melo var. makuwa]5.4e-4475.83Show/hide
Query:  MEALLCDEDWLSSSAETRIETHHAKM-HGDFAESLTSSIC--VTTKEDEAQAVSVCMEKEMSYMPEPHYKEFLESKNLVFVRLRCIQWLIKCRSRWNLSH
        M+ALLCDEDWLS S ETR E +H  M HG F +S+TSS+C  +T KE++ +AVSVCMEKEMSYMPEP+YKEFLESKNLVFVRLRCIQW+IKCRSRW+ SH
Subjt:  MEALLCDEDWLSSSAETRIETHHAKM-HGDFAESLTSSIC--VTTKEDEAQAVSVCMEKEMSYMPEPHYKEFLESKNLVFVRLRCIQWLIKCRSRWNLSH

Query:  GTVFLAANYLDRYISKNRFK
         TVFLAANYLDR+ISKNR K
Subjt:  GTVFLAANYLDRYISKNRFK

XP_011654370.1 putative cyclin-D7-1 [Cucumis sativus]4.0e-3971.67Show/hide
Query:  MEALLCDEDWLS-SSAETRIETHHAKMHGDFAESLTSSICVT--TKEDEAQAVSVCMEKEMSYMPEPHYKEFLESKNLVFVRLRCIQWLIKCRSRWNLSH
        M+ LLCDEDWLS S+ +TR E H A  HG F   +TSSIC+T   KE + QAVS+ MEKEMSYMPEP+YKEFLES++LVFVRLRCIQW+IKCRSRW+ SH
Subjt:  MEALLCDEDWLS-SSAETRIETHHAKMHGDFAESLTSSICVT--TKEDEAQAVSVCMEKEMSYMPEPHYKEFLESKNLVFVRLRCIQWLIKCRSRWNLSH

Query:  GTVFLAANYLDRYISKNRFK
         TVFLAANYLDR+ISKNR K
Subjt:  GTVFLAANYLDRYISKNRFK

XP_016900514.1 PREDICTED: putative cyclin-D7-1, partial [Cucumis melo]5.4e-4475.83Show/hide
Query:  MEALLCDEDWLSSSAETRIETHHAKM-HGDFAESLTSSIC--VTTKEDEAQAVSVCMEKEMSYMPEPHYKEFLESKNLVFVRLRCIQWLIKCRSRWNLSH
        M+ALLCDEDWLS S ETR E +H  M HG F +S+TSS+C  +T KE++ +AVSVCMEKEMSYMPEP+YKEFLESKNLVFVRLRCIQW+IKCRSRW+ SH
Subjt:  MEALLCDEDWLSSSAETRIETHHAKM-HGDFAESLTSSIC--VTTKEDEAQAVSVCMEKEMSYMPEPHYKEFLESKNLVFVRLRCIQWLIKCRSRWNLSH

Query:  GTVFLAANYLDRYISKNRFK
         TVFLAANYLDR+ISKNR K
Subjt:  GTVFLAANYLDRYISKNRFK

XP_022143908.1 putative cyclin-D7-1 [Momordica charantia]3.4e-4681.36Show/hide
Query:  MEALLCDEDWLSSSAETRIETHHAKMHGDFAESLTSSICVTTK-EDEAQAVSVCMEKEMSYMPEPHYKEFLESKNLVFVRLRCIQWLIKCRSRWNLSHGT
        MEALLCDEDWLSS AE  I  HH K HG  AESL SS+CVT   ED  QAVSVC+EKEMSYMPE HYKEFLESKNLVFVRLRCIQWLIKCR RW+LSHGT
Subjt:  MEALLCDEDWLSSSAETRIETHHAKMHGDFAESLTSSICVTTK-EDEAQAVSVCMEKEMSYMPEPHYKEFLESKNLVFVRLRCIQWLIKCRSRWNLSHGT

Query:  VFLAANYLDRYISKNRFK
        VFLAANYLDR+ISKNR K
Subjt:  VFLAANYLDRYISKNRFK

XP_038880932.1 putative cyclin-D7-1 [Benincasa hispida]6.0e-4376.47Show/hide
Query:  MEALLCDEDWLSSSAETRIETHHAKMHGDFAESLTSSICVTT--KEDEAQAVSVCMEKEMSYMPEPHYKEFLESKNLVFVRLRCIQWLIKCRSRWNLSHG
        MEALLCDEDWLS S ETR E      HG + +S+  S+C+TT  KE++ QAVSVCMEKEMSYMPEPHYKEFLESK+LVFVRLRCIQWLIKCRSRWN S+G
Subjt:  MEALLCDEDWLSSSAETRIETHHAKMHGDFAESLTSSICVTT--KEDEAQAVSVCMEKEMSYMPEPHYKEFLESKNLVFVRLRCIQWLIKCRSRWNLSHG

Query:  TVFLAANYLDRYISKNRFK
        TVFLAANYLDR+ISKNR K
Subjt:  TVFLAANYLDRYISKNRFK

TrEMBL top hitse value%identityAlignment
A0A0A0L0Z4 B-like cyclin1.0e-4072.95Show/hide
Query:  LLCDEDWLS-SSAETRIETHHAKMHGDFAESLTSSICVT--TKEDEAQAVSVCMEKEMSYMPEPHYKEFLESKNLVFVRLRCIQWLIKCRSRWNLSHGTV
        LLCDEDWLS S+ +TR E H A  HG F   +TSSIC+T   KE + QAVS+ MEKEMSYMPEP+YKEFLES++LVFVRLRCIQW+IKCRSRW+ SH TV
Subjt:  LLCDEDWLS-SSAETRIETHHAKMHGDFAESLTSSICVT--TKEDEAQAVSVCMEKEMSYMPEPHYKEFLESKNLVFVRLRCIQWLIKCRSRWNLSHGTV

Query:  FLAANYLDRYISKNRFKVSKFL
        FLAANYLDR+ISKNR KVS FL
Subjt:  FLAANYLDRYISKNRFKVSKFL

A0A1S4DX09 B-like cyclin2.6e-4475.83Show/hide
Query:  MEALLCDEDWLSSSAETRIETHHAKM-HGDFAESLTSSIC--VTTKEDEAQAVSVCMEKEMSYMPEPHYKEFLESKNLVFVRLRCIQWLIKCRSRWNLSH
        M+ALLCDEDWLS S ETR E +H  M HG F +S+TSS+C  +T KE++ +AVSVCMEKEMSYMPEP+YKEFLESKNLVFVRLRCIQW+IKCRSRW+ SH
Subjt:  MEALLCDEDWLSSSAETRIETHHAKM-HGDFAESLTSSIC--VTTKEDEAQAVSVCMEKEMSYMPEPHYKEFLESKNLVFVRLRCIQWLIKCRSRWNLSH

Query:  GTVFLAANYLDRYISKNRFK
         TVFLAANYLDR+ISKNR K
Subjt:  GTVFLAANYLDRYISKNRFK

A0A5A7STN6 B-like cyclin2.6e-4475.83Show/hide
Query:  MEALLCDEDWLSSSAETRIETHHAKM-HGDFAESLTSSIC--VTTKEDEAQAVSVCMEKEMSYMPEPHYKEFLESKNLVFVRLRCIQWLIKCRSRWNLSH
        M+ALLCDEDWLS S ETR E +H  M HG F +S+TSS+C  +T KE++ +AVSVCMEKEMSYMPEP+YKEFLESKNLVFVRLRCIQW+IKCRSRW+ SH
Subjt:  MEALLCDEDWLSSSAETRIETHHAKM-HGDFAESLTSSIC--VTTKEDEAQAVSVCMEKEMSYMPEPHYKEFLESKNLVFVRLRCIQWLIKCRSRWNLSH

Query:  GTVFLAANYLDRYISKNRFK
         TVFLAANYLDR+ISKNR K
Subjt:  GTVFLAANYLDRYISKNRFK

A0A6J1CRV7 B-like cyclin1.6e-4681.36Show/hide
Query:  MEALLCDEDWLSSSAETRIETHHAKMHGDFAESLTSSICVTTK-EDEAQAVSVCMEKEMSYMPEPHYKEFLESKNLVFVRLRCIQWLIKCRSRWNLSHGT
        MEALLCDEDWLSS AE  I  HH K HG  AESL SS+CVT   ED  QAVSVC+EKEMSYMPE HYKEFLESKNLVFVRLRCIQWLIKCR RW+LSHGT
Subjt:  MEALLCDEDWLSSSAETRIETHHAKMHGDFAESLTSSICVTTK-EDEAQAVSVCMEKEMSYMPEPHYKEFLESKNLVFVRLRCIQWLIKCRSRWNLSHGT

Query:  VFLAANYLDRYISKNRFK
        VFLAANYLDR+ISKNR K
Subjt:  VFLAANYLDRYISKNRFK

A0A6J1ISI8 B-like cyclin8.2e-3871.67Show/hide
Query:  MEALLCDEDWLSSSAETRIETHHAKMHGDFAESLTSSICVTTKEDEAQ---AVSVCMEKEMSYMPEPHYKEFLESKNLVFVRLRCIQWLIKCRSRWNLSH
        ME LLCDEDWLS+SAET         HG       S +CV  KEDE +   AVSVCM KEMSYMPEPHYKEFLE+++LVFVRLRCIQWL+KCRSRWNLSH
Subjt:  MEALLCDEDWLSSSAETRIETHHAKMHGDFAESLTSSICVTTKEDEAQ---AVSVCMEKEMSYMPEPHYKEFLESKNLVFVRLRCIQWLIKCRSRWNLSH

Query:  GTVFLAANYLDRYISKNRFK
        GTVFLAANYLDR+ISKNR K
Subjt:  GTVFLAANYLDRYISKNRFK

SwissProt top hitse value%identityAlignment
Q5A0A9 G2/mitotic-specific cyclin-44.6e-0634.33Show/hide
Query:  EKEMSYMPEPHYKEFLESKNLVFVRLRCIQWLIKCRSRWNLSHGTVFLAANYLDRYISKNRFKVSKF
        E E  + P+P+Y +F +      +R   I W+++  +R+NL   T++L  NY+DR++SK R  +S+F
Subjt:  EKEMSYMPEPHYKEFLESKNLVFVRLRCIQWLIKCRSRWNLSHGTVFLAANYLDRYISKNRFKVSKF

Q8LHA8 Cyclin-D2-22.0e-0437.68Show/hide
Query:  DEAQAVSVCMEKEMSYMPEPHYKEFLESKNL-VFVRLRCIQWLIKCRSRWNLSHGTVFLAANYLDRYIS
        D  + V++ +EKEM + P+  Y E LE   L    R   I W+ K  S +N    +++LA NYLDR++S
Subjt:  DEAQAVSVCMEKEMSYMPEPHYKEFLESKNL-VFVRLRCIQWLIKCRSRWNLSHGTVFLAANYLDRYIS

Q9LZM0 Putative cyclin-D7-16.9e-1032.56Show/hide
Query:  MEALLCDEDWLSSSAETR-IETHHAKMHGDFAESLTSSICVTTKEDEAQAVSVCMEKEMSYMPE-PHYKEFLESKNLVFVRLRCIQWLIKCRSRWNLSHG
        M+ LLC+E W +S      +     + H +    +   I   T E   +A+++ +EKE+ +      + EF  SK L   R    QWLI+ RSR NLS+ 
Subjt:  MEALLCDEDWLSSSAETR-IETHHAKMHGDFAESLTSSICVTTKEDEAQAVSVCMEKEMSYMPE-PHYKEFLESKNLVFVRLRCIQWLIKCRSRWNLSHG

Query:  TVFLAANYLDRYISKNRFKVSKFLRCCDD
        TVF AAN  DR++         ++ CCD+
Subjt:  TVFLAANYLDRYISKNRFKVSKFLRCCDD

Q9SN11 Cyclin-D3-31.5e-0434.55Show/hide
Query:  YKEFLESKNLVFVRLRCIQWLIKCRSRWNLSHGTVFLAANYLDRYISKNRFKVSK
        Y E L+ + LV  R + + W+ K +S +  +  T  LA NY DR+I+  +F+  K
Subjt:  YKEFLESKNLVFVRLRCIQWLIKCRSRWNLSHGTVFLAANYLDRYISKNRFKVSK

Arabidopsis top hitse value%identityAlignment
AT1G77390.1 CYCLIN A1;27.6e-0434.48Show/hide
Query:  EMSYMPEPHYKEFLESKNLVFVRLRCIQWLIKCRSRWNLSHGTVFLAANYLDRYISKN
        E++  P   Y E  +S     +R   I WL++    + LS  T++LA NY+DRY++ N
Subjt:  EMSYMPEPHYKEFLESKNLVFVRLRCIQWLIKCRSRWNLSHGTVFLAANYLDRYISKN

AT3G50070.1 CYCLIN D3;31.1e-0534.55Show/hide
Query:  YKEFLESKNLVFVRLRCIQWLIKCRSRWNLSHGTVFLAANYLDRYISKNRFKVSK
        Y E L+ + LV  R + + W+ K +S +  +  T  LA NY DR+I+  +F+  K
Subjt:  YKEFLESKNLVFVRLRCIQWLIKCRSRWNLSHGTVFLAANYLDRYISKNRFKVSK

AT5G02110.1 CYCLIN D7;14.9e-1132.56Show/hide
Query:  MEALLCDEDWLSSSAETR-IETHHAKMHGDFAESLTSSICVTTKEDEAQAVSVCMEKEMSYMPE-PHYKEFLESKNLVFVRLRCIQWLIKCRSRWNLSHG
        M+ LLC+E W +S      +     + H +    +   I   T E   +A+++ +EKE+ +      + EF  SK L   R    QWLI+ RSR NLS+ 
Subjt:  MEALLCDEDWLSSSAETR-IETHHAKMHGDFAESLTSSICVTTKEDEAQAVSVCMEKEMSYMPE-PHYKEFLESKNLVFVRLRCIQWLIKCRSRWNLSHG

Query:  TVFLAANYLDRYISKNRFKVSKFLRCCDD
        TVF AAN  DR++         ++ CCD+
Subjt:  TVFLAANYLDRYISKNRFKVSKFLRCCDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCTTTGCTTTGCGATGAGGATTGGCTTTCGAGTTCAGCTGAGACTCGTATCGAAACCCACCATGCGAAGATGCATGGCGATTTCGCTGAAAGCCTTACGAGTTC
GATTTGTGTAACTACAAAGGAAGATGAGGCGCAGGCCGTCTCGGTCTGCATGGAGAAGGAGATGAGTTACATGCCCGAACCTCATTATAAGGAGTTTCTTGAAAGTAAAA
ATCTTGTTTTTGTGAGGCTGAGATGCATTCAATGGCTGATCAAGTGTAGAAGTCGATGGAATCTCTCCCATGGCACTGTTTTTCTTGCTGCAAATTACCTCGATCGCTAC
ATATCTAAGAACAGATTCAAAGTAAGCAAATTTCTTCGTTGTTGTGATGATGGGTTTGGATTAGAAACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCTTTGCTTTGCGATGAGGATTGGCTTTCGAGTTCAGCTGAGACTCGTATCGAAACCCACCATGCGAAGATGCATGGCGATTTCGCTGAAAGCCTTACGAGTTC
GATTTGTGTAACTACAAAGGAAGATGAGGCGCAGGCCGTCTCGGTCTGCATGGAGAAGGAGATGAGTTACATGCCCGAACCTCATTATAAGGAGTTTCTTGAAAGTAAAA
ATCTTGTTTTTGTGAGGCTGAGATGCATTCAATGGCTGATCAAGTGTAGAAGTCGATGGAATCTCTCCCATGGCACTGTTTTTCTTGCTGCAAATTACCTCGATCGCTAC
ATATCTAAGAACAGATTCAAAGTAAGCAAATTTCTTCGTTGTTGTGATGATGGGTTTGGATTAGAAACTTAA
Protein sequenceShow/hide protein sequence
MEALLCDEDWLSSSAETRIETHHAKMHGDFAESLTSSICVTTKEDEAQAVSVCMEKEMSYMPEPHYKEFLESKNLVFVRLRCIQWLIKCRSRWNLSHGTVFLAANYLDRY
ISKNRFKVSKFLRCCDDGFGLET