; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0012499 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012499
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUPF0161 protein At3g09310
Genome locationchr1:41665265..41669419
RNA-Seq ExpressionLag0012499
SyntenyLag0012499
Gene Ontology termsNA
InterPro domainsIPR002696 - Putative membrane protein insertion efficiency factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032659.1 UPF0161 protein [Cucumis melo var. makuwa]2.2e-7185.99Show/hide
Query:  MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSANSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNC+TP N NPIFF  RCHQR   AAGFSIR N R L RPL+LSETRATS SSANS+QDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSANSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERL
        CSEYSMQAYKKYGVAKGT+LTAWRLCRCNP    LGHC  VGGSGFDPPRWFDEERL
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERL

XP_004142065.1 UPF0161 protein At3g09310 isoform X1 [Cucumis sativus]9.1e-7085.99Show/hide
Query:  MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSANSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNCHT  N NPIFFA RCHQR CSAAGFSIR N R L R L+LSETRATSNSSANS+QDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSANSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERL
        CSEYSMQAYKKYGVAKGTILTAWRLCRCNPL          GGSGFDPPRWFDEERL
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERL

XP_008448003.1 PREDICTED: UPF0161 protein At3g09310 [Cucumis melo]1.4e-6783.44Show/hide
Query:  MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSANSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNC+TP N NPIFF  RCHQR   AAGFSIR N R L RPL+LSETRATS SSANS+QDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSANSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERL
        CSEYSMQAYKKYGVAKGT+LTAWRLCRCNPL          GGSGFDPPRWFDEERL
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERL

XP_022931846.1 UPF0161 protein At3g09310 [Cucurbita moschata]1.0e-6581.53Show/hide
Query:  MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSANSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNCH   NQNPIFFA  C + H SAA FSIR N + L RPL++SETRATSNSSAN +QDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSANSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERL
        CSEYSMQAYKKYGVAKGTILTAWRLCRCNPL          GGSGFDPPRWFDEERL
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERL

XP_038882937.1 UPF0161 protein At3g09310 isoform X3 [Benincasa hispida]1.4e-6582.17Show/hide
Query:  MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSANSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVL TTNCH   NQNP FFA RCHQR  SAA FSI+ NRR L RPL+LS+TRATSNSS+NS+QDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSANSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERL
        CSEYSMQAYKKYGVAKGTILTAWRLCRCNPL          GGSGFDPPRWFDEE L
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERL

TrEMBL top hitse value%identityAlignment
A0A0A0KXI4 Uncharacterized protein4.4e-7085.99Show/hide
Query:  MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSANSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNCHT  N NPIFFA RCHQR CSAAGFSIR N R L R L+LSETRATSNSSANS+QDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSANSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERL
        CSEYSMQAYKKYGVAKGTILTAWRLCRCNPL          GGSGFDPPRWFDEERL
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERL

A0A1S3BJN3 UPF0161 protein At3g093107.0e-6883.44Show/hide
Query:  MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSANSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNC+TP N NPIFF  RCHQR   AAGFSIR N R L RPL+LSETRATS SSANS+QDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSANSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERL
        CSEYSMQAYKKYGVAKGT+LTAWRLCRCNPL          GGSGFDPPRWFDEERL
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERL

A0A5A7STY4 UPF0161 protein1.0e-7185.99Show/hide
Query:  MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSANSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNC+TP N NPIFF  RCHQR   AAGFSIR N R L RPL+LSETRATS SSANS+QDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSANSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERL
        CSEYSMQAYKKYGVAKGT+LTAWRLCRCNP    LGHC  VGGSGFDPPRWFDEERL
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERL

A0A6J1EUS1 UPF0161 protein At3g093105.0e-6681.53Show/hide
Query:  MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSANSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNCH   NQNPIFFA  C + H SAA FSIR N + L RPL++SETRATSNSSAN +QDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSANSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERL
        CSEYSMQAYKKYGVAKGTILTAWRLCRCNPL          GGSGFDPPRWFDEERL
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERL

A0A6J1HNH0 UPF0161 protein At3g093103.1e-6380.25Show/hide
Query:  MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSANSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNCH    Q PIFFA  C Q H SAA FSIR N + L RPL++SETRATSNSSAN +QDGEVDNLGVKAALSMLKFYKREISPLLPNSCRY+PT
Subjt:  MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSANSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERL
        CSEYSMQAYKKYGVAKGTILTAWRLCRCNPL          GGSGFDPPRWFDEERL
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERL

SwissProt top hitse value%identityAlignment
B0T0Z8 Putative membrane protein insertion efficiency factor3.3e-1452.86Show/hide
Query:  LKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFDPP
        LK YK  +SP +   CRYLPTCSEY+ QA K +G  KG+ L   R+CRCNPL          GGSG+DPP
Subjt:  LKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFDPP

C0QTH8 Putative membrane protein insertion efficiency factor1.6e-1353.7Show/hide
Query:  LSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNP
        + ++K YK+ +SP LPNSCRY PTCS Y++Q+ +KYG  KG++   WR+ RCNP
Subjt:  LSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNP

Q11SD8 Putative membrane protein insertion efficiency factor3.6e-1352.17Show/hide
Query:  LKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFDP
        +K Y+  ISPLLP +CRY PTCSEY +QA +KYG  KG  L   R+C CNP           GGSG+DP
Subjt:  LKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFDP

Q2S3T2 Putative membrane protein insertion efficiency factor6.0e-1645.57Show/hide
Query:  LSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEE
        + +++ Y+  +SP L  +CR+ PTCS Y++QA+++YG  KG +LT  RL RC+P           GG G+DPPRWFDEE
Subjt:  LSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEE

Q9SR32 UPF0161 protein At3g093101.7e-3466.36Show/hide
Query:  LSETRATSNSSANSEQDG-EVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFD
        LS     S     S QDG E++++GVKAAL+ML+FYKREISP+LP SCRY+PTCSEYSM+AYKKYGV KGT+LT WRLCRCNPL          GGSGFD
Subjt:  LSETRATSNSSANSEQDG-EVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFD

Query:  PPRWFDE
        PPRWF E
Subjt:  PPRWFDE

Arabidopsis top hitse value%identityAlignment
AT3G09310.1 unknown protein1.2e-3566.36Show/hide
Query:  LSETRATSNSSANSEQDG-EVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFD
        LS     S     S QDG E++++GVKAAL+ML+FYKREISP+LP SCRY+PTCSEYSM+AYKKYGV KGT+LT WRLCRCNPL          GGSGFD
Subjt:  LSETRATSNSSANSEQDG-EVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFD

Query:  PPRWFDE
        PPRWF E
Subjt:  PPRWFDE

AT3G27520.1 unknown protein8.6e-1036.02Show/hide
Query:  ERDGFVYKRKRR-RLDPAEAVAARSSVAQEAADLQAEENRRRERGWKTLLKVRAKYQREIEQWEVLSNNLRAMEERTRRLQELYRRE--GEEGTASLLGA
        E DGFVY RK+R R   AE     S       D   EE  RR R  + L+K++ KYQ EI+QWE+LSN+  AM+E+  R Q   R E      T S  G 
Subjt:  ERDGFVYKRKRR-RLDPAEAVAARSSVAQEAADLQAEENRRRERGWKTLLKVRAKYQREIEQWEVLSNNLRAMEERTRRLQELYRRE--GEEGTASLLGA

Query:  SLLNVVQEKEL-------SCASMVEELL-------SQVNRYSVLCHNSQNIRNREIERDEQ
        S       +E        S +SM+++LL       + +N  S LC  ++NI   E E  +Q
Subjt:  SLLNVVQEKEL-------SCASMVEELL-------SQVNRYSVLCHNSQNIRNREIERDEQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTCTTCCCACCACAAACTGCCACACACCCCATAACCAGAACCCAATCTTCTTCGCCAGCCGCTGCCATCAAAGGCACTGCTCCGCCGCCGGCTTCAGTATTCG
ATTGAATCGCCGAGCGCTCTGTCGGCCGTTAGTCCTTAGCGAAACGCGTGCCACATCGAATTCGAGCGCGAACAGCGAGCAAGATGGCGAAGTGGACAATCTGGGGGTTA
AAGCTGCATTATCCATGCTTAAATTCTACAAACGAGAAATCTCGCCGCTATTGCCAAATAGTTGTCGCTATTTACCTACGTGTAGTGAGTATTCCATGCAAGCTTACAAA
AAATATGGTGTTGCGAAGGGCACAATCTTGACTGCTTGGCGTCTCTGCCGCTGCAATCCCCTTGTATTGATTCTAGGCCATTGCTTATTTGTAGGTGGATCTGGGTTTGA
TCCTCCGCGGTGGTTTGATGAAGAAAGGTTGTCCTGGCTAATTTGTTTGATCGTTGTGCTGTGGGCGGGGGAATCTGTGGGAGCTAATGCCCTATGCAGAAAGAGGGAGA
GGGAGGAGGCTCCTCCCTCCCTTTCCGGCGCCGGTGACGGGAGGAGGGAGGCCCTCCTCCCTCACTGCTTCAGATCTATAAGTTTACAAGCGGAAAGGGATGGCTTTGTC
TACAAGCGCAAGAGGCGCCGGCTGGACCCGGCAGAAGCCGTTGCAGCTCGTTCGTCGGTGGCTCAGGAGGCGGCGGACCTTCAGGCGGAGGAGAATCGACGGCGAGAGCG
CGGGTGGAAGACGTTGTTGAAGGTTAGAGCGAAGTATCAGAGAGAGATTGAGCAGTGGGAGGTTTTGTCGAACAACTTGCGGGCGATGGAGGAGAGGACTCGGAGGCTGC
AAGAACTGTACAGACGGGAAGGGGAAGAAGGAACCGCGTCGCTTCTGGGCGCTTCCTTGTTGAACGTGGTTCAGGAGAAGGAGTTGTCCTGCGCATCAATGGTGGAGGAA
CTTCTCTCTCAGGTAAATCGATATTCGGTCTTGTGTCATAATAGTCAGAATATTAGAAACAGAGAGATAGAGAGAGATGAGCAGGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTTCTTCCCACCACAAACTGCCACACACCCCATAACCAGAACCCAATCTTCTTCGCCAGCCGCTGCCATCAAAGGCACTGCTCCGCCGCCGGCTTCAGTATTCG
ATTGAATCGCCGAGCGCTCTGTCGGCCGTTAGTCCTTAGCGAAACGCGTGCCACATCGAATTCGAGCGCGAACAGCGAGCAAGATGGCGAAGTGGACAATCTGGGGGTTA
AAGCTGCATTATCCATGCTTAAATTCTACAAACGAGAAATCTCGCCGCTATTGCCAAATAGTTGTCGCTATTTACCTACGTGTAGTGAGTATTCCATGCAAGCTTACAAA
AAATATGGTGTTGCGAAGGGCACAATCTTGACTGCTTGGCGTCTCTGCCGCTGCAATCCCCTTGTATTGATTCTAGGCCATTGCTTATTTGTAGGTGGATCTGGGTTTGA
TCCTCCGCGGTGGTTTGATGAAGAAAGGTTGTCCTGGCTAATTTGTTTGATCGTTGTGCTGTGGGCGGGGGAATCTGTGGGAGCTAATGCCCTATGCAGAAAGAGGGAGA
GGGAGGAGGCTCCTCCCTCCCTTTCCGGCGCCGGTGACGGGAGGAGGGAGGCCCTCCTCCCTCACTGCTTCAGATCTATAAGTTTACAAGCGGAAAGGGATGGCTTTGTC
TACAAGCGCAAGAGGCGCCGGCTGGACCCGGCAGAAGCCGTTGCAGCTCGTTCGTCGGTGGCTCAGGAGGCGGCGGACCTTCAGGCGGAGGAGAATCGACGGCGAGAGCG
CGGGTGGAAGACGTTGTTGAAGGTTAGAGCGAAGTATCAGAGAGAGATTGAGCAGTGGGAGGTTTTGTCGAACAACTTGCGGGCGATGGAGGAGAGGACTCGGAGGCTGC
AAGAACTGTACAGACGGGAAGGGGAAGAAGGAACCGCGTCGCTTCTGGGCGCTTCCTTGTTGAACGTGGTTCAGGAGAAGGAGTTGTCCTGCGCATCAATGGTGGAGGAA
CTTCTCTCTCAGGTAAATCGATATTCGGTCTTGTGTCATAATAGTCAGAATATTAGAAACAGAGAGATAGAGAGAGATGAGCAGGGTTGA
Protein sequenceShow/hide protein sequence
MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSANSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYK
KYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERLSWLICLIVVLWAGESVGANALCRKREREEAPPSLSGAGDGRREALLPHCFRSISLQAERDGFV
YKRKRRRLDPAEAVAARSSVAQEAADLQAEENRRRERGWKTLLKVRAKYQREIEQWEVLSNNLRAMEERTRRLQELYRREGEEGTASLLGASLLNVVQEKELSCASMVEE
LLSQVNRYSVLCHNSQNIRNREIERDEQG