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Lag0012508 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012508
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCUE domain-containing protein
Genome locationchr1:41735009..41737833
RNA-Seq ExpressionLag0012508
SyntenyLag0012508
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027320.1 hypothetical protein SDJN02_11332, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-4384.03Show/hide
Query:  QMS-HEKVEEAIDVSSAIAEGNGMHGSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAYSRESEELKHASLKEHFQSLVSDNQILKRAVAIQHEC
        QMS HEKVEEA DV SAIAEGNGMHG KWVDMFVQEM SAVD+DDAR+RAARILEAFEH+I A+SRESEELKH SLKEHFQSLV+DNQILKRAVAIQHE 
Subjt:  QMS-HEKVEEAIDVSSAIAEGNGMHGSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAYSRESEELKHASLKEHFQSLVSDNQILKRAVAIQHEC

Query:  NLEQEEKTREV-MLKICFC
        NLEQEEKT+EV  LK   C
Subjt:  NLEQEEKTREV-MLKICFC

XP_008447682.1 PREDICTED: uncharacterized protein LOC103490091 isoform X1 [Cucumis melo]4.1e-4483.9Show/hide
Query:  QMSHEKVEEAIDVSSAIAEGNGMHGSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAYSRESEELKHASLKEHFQSLVSDNQILKRAVAIQHECN
        QMSHEK+EEA DVSSA+AEGNGMHGSKWVDMFVQEM  AVD+ DARIRAARILEAFEHN+   SRESEELKHASLKEH QSLV+DNQILKRAVAIQHE N
Subjt:  QMSHEKVEEAIDVSSAIAEGNGMHGSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAYSRESEELKHASLKEHFQSLVSDNQILKRAVAIQHECN

Query:  LEQEEKTREV-MLKICFC
        LEQEEKTREV  LK   C
Subjt:  LEQEEKTREV-MLKICFC

XP_008447686.1 PREDICTED: uncharacterized protein LOC103490091 isoform X2 [Cucumis melo]4.1e-4483.9Show/hide
Query:  QMSHEKVEEAIDVSSAIAEGNGMHGSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAYSRESEELKHASLKEHFQSLVSDNQILKRAVAIQHECN
        QMSHEK+EEA DVSSA+AEGNGMHGSKWVDMFVQEM  AVD+ DARIRAARILEAFEHN+   SRESEELKHASLKEH QSLV+DNQILKRAVAIQHE N
Subjt:  QMSHEKVEEAIDVSSAIAEGNGMHGSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAYSRESEELKHASLKEHFQSLVSDNQILKRAVAIQHECN

Query:  LEQEEKTREV-MLKICFC
        LEQEEKTREV  LK   C
Subjt:  LEQEEKTREV-MLKICFC

XP_022143875.1 uncharacterized protein LOC111013683 isoform X1 [Momordica charantia]2.0e-4381.36Show/hide
Query:  QMSHEKVEEAIDVSSAIAEGNGMHGSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAYSRESEELKHASLKEHFQSLVSDNQILKRAVAIQHECN
        QMSHEKVE+  DVSSA+AEGN MHGSKWVDMFVQEMT+A+DLDDAR RA RILEAFEHN+ A+SRESEELKHASLKEH Q+LV+DNQILKRAVAIQHE N
Subjt:  QMSHEKVEEAIDVSSAIAEGNGMHGSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAYSRESEELKHASLKEHFQSLVSDNQILKRAVAIQHECN

Query:  LEQEEKTREV-MLKICFC
        LEQEEKT+EV  LK   C
Subjt:  LEQEEKTREV-MLKICFC

XP_022143877.1 uncharacterized protein LOC111013683 isoform X2 [Momordica charantia]2.0e-4381.36Show/hide
Query:  QMSHEKVEEAIDVSSAIAEGNGMHGSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAYSRESEELKHASLKEHFQSLVSDNQILKRAVAIQHECN
        QMSHEKVE+  DVSSA+AEGN MHGSKWVDMFVQEMT+A+DLDDAR RA RILEAFEHN+ A+SRESEELKHASLKEH Q+LV+DNQILKRAVAIQHE N
Subjt:  QMSHEKVEEAIDVSSAIAEGNGMHGSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAYSRESEELKHASLKEHFQSLVSDNQILKRAVAIQHECN

Query:  LEQEEKTREV-MLKICFC
        LEQEEKT+EV  LK   C
Subjt:  LEQEEKTREV-MLKICFC

TrEMBL top hitse value%identityAlignment
A0A1S3BHY9 uncharacterized protein LOC103490091 isoform X12.0e-4483.9Show/hide
Query:  QMSHEKVEEAIDVSSAIAEGNGMHGSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAYSRESEELKHASLKEHFQSLVSDNQILKRAVAIQHECN
        QMSHEK+EEA DVSSA+AEGNGMHGSKWVDMFVQEM  AVD+ DARIRAARILEAFEHN+   SRESEELKHASLKEH QSLV+DNQILKRAVAIQHE N
Subjt:  QMSHEKVEEAIDVSSAIAEGNGMHGSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAYSRESEELKHASLKEHFQSLVSDNQILKRAVAIQHECN

Query:  LEQEEKTREV-MLKICFC
        LEQEEKTREV  LK   C
Subjt:  LEQEEKTREV-MLKICFC

A0A1S3BIW7 uncharacterized protein LOC103490091 isoform X22.0e-4483.9Show/hide
Query:  QMSHEKVEEAIDVSSAIAEGNGMHGSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAYSRESEELKHASLKEHFQSLVSDNQILKRAVAIQHECN
        QMSHEK+EEA DVSSA+AEGNGMHGSKWVDMFVQEM  AVD+ DARIRAARILEAFEHN+   SRESEELKHASLKEH QSLV+DNQILKRAVAIQHE N
Subjt:  QMSHEKVEEAIDVSSAIAEGNGMHGSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAYSRESEELKHASLKEHFQSLVSDNQILKRAVAIQHECN

Query:  LEQEEKTREV-MLKICFC
        LEQEEKTREV  LK   C
Subjt:  LEQEEKTREV-MLKICFC

A0A5D3DIN3 CUE domain-containing protein2.0e-4483.9Show/hide
Query:  QMSHEKVEEAIDVSSAIAEGNGMHGSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAYSRESEELKHASLKEHFQSLVSDNQILKRAVAIQHECN
        QMSHEK+EEA DVSSA+AEGNGMHGSKWVDMFVQEM  AVD+ DARIRAARILEAFEHN+   SRESEELKHASLKEH QSLV+DNQILKRAVAIQHE N
Subjt:  QMSHEKVEEAIDVSSAIAEGNGMHGSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAYSRESEELKHASLKEHFQSLVSDNQILKRAVAIQHECN

Query:  LEQEEKTREV-MLKICFC
        LEQEEKTREV  LK   C
Subjt:  LEQEEKTREV-MLKICFC

A0A6J1CQ09 uncharacterized protein LOC111013683 isoform X19.7e-4481.36Show/hide
Query:  QMSHEKVEEAIDVSSAIAEGNGMHGSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAYSRESEELKHASLKEHFQSLVSDNQILKRAVAIQHECN
        QMSHEKVE+  DVSSA+AEGN MHGSKWVDMFVQEMT+A+DLDDAR RA RILEAFEHN+ A+SRESEELKHASLKEH Q+LV+DNQILKRAVAIQHE N
Subjt:  QMSHEKVEEAIDVSSAIAEGNGMHGSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAYSRESEELKHASLKEHFQSLVSDNQILKRAVAIQHECN

Query:  LEQEEKTREV-MLKICFC
        LEQEEKT+EV  LK   C
Subjt:  LEQEEKTREV-MLKICFC

A0A6J1CS47 uncharacterized protein LOC111013683 isoform X29.7e-4481.36Show/hide
Query:  QMSHEKVEEAIDVSSAIAEGNGMHGSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAYSRESEELKHASLKEHFQSLVSDNQILKRAVAIQHECN
        QMSHEKVE+  DVSSA+AEGN MHGSKWVDMFVQEMT+A+DLDDAR RA RILEAFEHN+ A+SRESEELKHASLKEH Q+LV+DNQILKRAVAIQHE N
Subjt:  QMSHEKVEEAIDVSSAIAEGNGMHGSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAYSRESEELKHASLKEHFQSLVSDNQILKRAVAIQHECN

Query:  LEQEEKTREV-MLKICFC
        LEQEEKT+EV  LK   C
Subjt:  LEQEEKTREV-MLKICFC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G80040.1 FUNCTIONS IN: molecular_function unknown4.8e-1136.11Show/hide
Query:  AIDVSSAIAEGN-GMHGSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAYSRESE----ELKHASLKEHFQSLVSDNQILKRAVAIQHECNLEQE
        A   + A+  GN    G  WV++ V+E+  +   DDA++RAAR+LEA E  + A +RE      + +  ++++  ++LV DN +LKRAVAIQHE     E
Subjt:  AIDVSSAIAEGN-GMHGSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAYSRESE----ELKHASLKEHFQSLVSDNQILKRAVAIQHECNLEQE

Query:  EKTREVML
        +   ++ L
Subjt:  EKTREVML

AT1G80040.3 FUNCTIONS IN: molecular_function unknown4.8e-1136.11Show/hide
Query:  AIDVSSAIAEGN-GMHGSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAYSRESE----ELKHASLKEHFQSLVSDNQILKRAVAIQHECNLEQE
        A   + A+  GN    G  WV++ V+E+  +   DDA++RAAR+LEA E  + A +RE      + +  ++++  ++LV DN +LKRAVAIQHE     E
Subjt:  AIDVSSAIAEGN-GMHGSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAYSRESE----ELKHASLKEHFQSLVSDNQILKRAVAIQHECNLEQE

Query:  EKTREVML
        +   ++ L
Subjt:  EKTREVML

AT5G02510.1 BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.1)6.9e-1851.72Show/hide
Query:  GSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAYSRESEELKHASLKEHFQSLVSDNQILKRAVAIQHECNLEQEEKTREVM
        G+KWVD  V EMT A+++DD R R A ILEA E  I   +  S++L++AS+KE  QSL++DNQILKR +A QH+ + E EEK ++V+
Subjt:  GSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAYSRESEELKHASLKEHFQSLVSDNQILKRAVAIQHECNLEQEEKTREVM

AT5G32440.1 Ubiquitin system component Cue protein6.3e-1136.96Show/hide
Query:  MHGSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAY----SRESEELKHASLKEHFQSLVSDNQILKRAVAIQHECNLEQEEKTREV
        + G++WV++FV+EM +A D+ DA+ RAAR LEA E +I A     + ++ + ++  LK+  +++V +N +LKRAV  Q +   E E++++E+
Subjt:  MHGSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAY----SRESEELKHASLKEHFQSLVSDNQILKRAVAIQHECNLEQEEKTREV

AT5G32440.3 Ubiquitin system component Cue protein6.3e-1136.96Show/hide
Query:  MHGSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAY----SRESEELKHASLKEHFQSLVSDNQILKRAVAIQHECNLEQEEKTREV
        + G++WV++FV+EM +A D+ DA+ RAAR LEA E +I A     + ++ + ++  LK+  +++V +N +LKRAV  Q +   E E++++E+
Subjt:  MHGSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAY----SRESEELKHASLKEHFQSLVSDNQILKRAVAIQHECNLEQEEKTREV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGACGGTGATGGAGGGGACGTTGGAGGCGAACGATAGGATGAACACGAGGACGAATTCGATAGAGTGTTGTTATTGGTCGATGGATTTCGGATCATCCAAGGGACC
ATATCCTCGAGAAACCCTTGTGGGCCCGTCTCTTCCTTTGGGTCGTCGGTGGCAGTGGGCCTGGAGAGATGAAAGTTGGGCTCTTGTGGGCTTCGTGAAATTGGGCTTCG
GGGTTGGGTTGATCGTCTTGGGCTTCTTGGTTGGAGATTGGGCCTGTGGGGTTTGGCCCATTAGGAAGAATGGTCAAATGTCACACGAGAAGGTCGAAGAAGCTATAGAC
GTTAGTTCAGCCATTGCTGAAGGAAATGGAATGCATGGATCCAAGTGGGTGGACATGTTTGTGCAAGAGATGACGAGCGCAGTGGATCTTGATGATGCTAGAATTCGAGC
TGCAAGGATTTTAGAAGCTTTTGAACACAACATAATTGCGTATTCAAGAGAATCAGAAGAGTTAAAGCATGCTTCTTTGAAGGAGCATTTCCAAAGCTTGGTAAGCGACA
ACCAAATTTTGAAGAGAGCAGTAGCCATTCAGCACGAGTGCAATCTCGAGCAAGAAGAGAAGACAAGAGAAGTTATGCTGAAAATTTGCTTTTGTGGTAAAAGCTTCAAA
TTCTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGACGGTGATGGAGGGGACGTTGGAGGCGAACGATAGGATGAACACGAGGACGAATTCGATAGAGTGTTGTTATTGGTCGATGGATTTCGGATCATCCAAGGGACC
ATATCCTCGAGAAACCCTTGTGGGCCCGTCTCTTCCTTTGGGTCGTCGGTGGCAGTGGGCCTGGAGAGATGAAAGTTGGGCTCTTGTGGGCTTCGTGAAATTGGGCTTCG
GGGTTGGGTTGATCGTCTTGGGCTTCTTGGTTGGAGATTGGGCCTGTGGGGTTTGGCCCATTAGGAAGAATGGTCAAATGTCACACGAGAAGGTCGAAGAAGCTATAGAC
GTTAGTTCAGCCATTGCTGAAGGAAATGGAATGCATGGATCCAAGTGGGTGGACATGTTTGTGCAAGAGATGACGAGCGCAGTGGATCTTGATGATGCTAGAATTCGAGC
TGCAAGGATTTTAGAAGCTTTTGAACACAACATAATTGCGTATTCAAGAGAATCAGAAGAGTTAAAGCATGCTTCTTTGAAGGAGCATTTCCAAAGCTTGGTAAGCGACA
ACCAAATTTTGAAGAGAGCAGTAGCCATTCAGCACGAGTGCAATCTCGAGCAAGAAGAGAAGACAAGAGAAGTTATGCTGAAAATTTGCTTTTGTGGTAAAAGCTTCAAA
TTCTCATGA
Protein sequenceShow/hide protein sequence
MWTVMEGTLEANDRMNTRTNSIECCYWSMDFGSSKGPYPRETLVGPSLPLGRRWQWAWRDESWALVGFVKLGFGVGLIVLGFLVGDWACGVWPIRKNGQMSHEKVEEAID
VSSAIAEGNGMHGSKWVDMFVQEMTSAVDLDDARIRAARILEAFEHNIIAYSRESEELKHASLKEHFQSLVSDNQILKRAVAIQHECNLEQEEKTREVMLKICFCGKSFK
FS