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Lag0012511 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012511
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSphingolipid delta(4)-desaturase DES1-like
Genome locationchr1:41765960..41768177
RNA-Seq ExpressionLag0012511
SyntenyLag0012511
Gene Ontology termsGO:0046513 - ceramide biosynthetic process (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0042284 - sphingolipid delta-4 desaturase activity (molecular function)
InterPro domainsIPR005804 - Fatty acid desaturase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN81291.1 hypothetical protein VITISV_005313 [Vitis vinifera]2.0e-3295.59Show/hide
Query:  VCLWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRI
        V  WGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNP+QETYSYYGPLNLLTWSVGYHNEHHDFPRI
Subjt:  VCLWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRI

KAF8413900.1 hypothetical protein HHK36_001896 [Tetracentron sinense]6.9e-3388.89Show/hide
Query:  YMRVCLWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRIS
        Y  V  WGWKSFAY+ILSTF+GGGMHPMAGHFISEHY+FNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRI+
Subjt:  YMRVCLWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRIS

XP_022723947.1 sphingolipid delta(4)-desaturase DES1-like [Durio zibethinus]1.2e-3297.06Show/hide
Query:  VCLWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRI
        V LWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVF PDQETYSYYGPLNLLTWSVGYHNEHHDFPRI
Subjt:  VCLWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRI

XP_034698823.1 sphingolipid delta(4)-desaturase DES1-like [Vitis riparia]2.0e-3295.59Show/hide
Query:  VCLWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRI
        V  WGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNP+QETYSYYGPLNLLTWSVGYHNEHHDFPRI
Subjt:  VCLWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRI

XP_042058107.1 sphingolipid delta(4)-desaturase DES1-like [Salvia splendens]6.9e-3395.59Show/hide
Query:  VCLWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRI
        VCL+GWKSF+YLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNL+TWSVGYHNEHHDFPRI
Subjt:  VCLWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRI

TrEMBL top hitse value%identityAlignment
A0A1R3H464 Sphingolipid 4-desaturase9.7e-3395.59Show/hide
Query:  VCLWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRI
        V +WGWKSFAYLILSTFVGGGMHPMAGHFISEHYVF PDQETYSYYGPLNLLTWSVGYHNEHHDFPRI
Subjt:  VCLWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRI

A0A1R3I1T6 Sphingolipid 4-desaturase9.7e-3395.59Show/hide
Query:  VCLWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRI
        V +WGWKSFAYLILSTFVGGGMHPMAGHFISEHYVF PDQETYSYYGPLNLLTWSVGYHNEHHDFPRI
Subjt:  VCLWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRI

A0A4D9B755 Sphingolipid delta(4)-desaturase DES1-like3.3e-3395.59Show/hide
Query:  VCLWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRI
        VCL+GWKSF+YLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNL+TWSVGYHNEHHDFPRI
Subjt:  VCLWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRI

A0A6P5X8L0 Sphingolipid delta(4)-desaturase DES1-like5.7e-3397.06Show/hide
Query:  VCLWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRI
        V LWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVF PDQETYSYYGPLNLLTWSVGYHNEHHDFPRI
Subjt:  VCLWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRI

A5BMX0 Sphingolipid delta(4)-desaturase DES1-like9.7e-3395.59Show/hide
Query:  VCLWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRI
        V  WGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNP+QETYSYYGPLNLLTWSVGYHNEHHDFPRI
Subjt:  VCLWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRI

SwissProt top hitse value%identityAlignment
O09005 Sphingolipid delta(4)-desaturase DES18.2e-2162.12Show/hide
Query:  LWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRI
        ++G KS  Y++ +T +G G+HP++GHFI+EHY+F    ETYSYYGPLNLLT++VGYHNEHHDFP +
Subjt:  LWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRI

Q5AJX2 Sphingolipid delta(4)-desaturase2.6e-2251.61Show/hide
Query:  YMRVCLWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQ-------------------ETYSYYGPLNLLTWSVGYHNEHHDFPRISIT
        ++ V  WGWK+  Y I+STF+ G +HP AGHFI+EHYV N +                    ETYSYYG LN+LTW+VGYHNEHHDFP I+ T
Subjt:  YMRVCLWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQ-------------------ETYSYYGPLNLLTWSVGYHNEHHDFPRISIT

Q5F3C1 Sphingolipid delta(4)-desaturase DES11.7e-2165.15Show/hide
Query:  LWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRI
        LWG KS  Y++  + +G G+HP++GHFI+EHY+F    ETYSYYGPLNLLT++VGYHNEHHDFP I
Subjt:  LWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRI

Q6H5U3 Sphingolipid delta(4)-desaturase DES1-like3.2e-3385.53Show/hide
Query:  VCLWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRISITDRFYQ
        V  +GWKS AYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNL+TW VGYHNEHHDFPRI  T R Y+
Subjt:  VCLWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRISITDRFYQ

Q9ZPH4 Sphingolipid delta(4)-desaturase DES1-like8.5e-3492.65Show/hide
Query:  VCLWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRI
        V  +GW+SFAYLILSTFVGGGMHPMAGHFISEHYVFNP+QETYSYYGPLNLLTWSVGYHNEHHDFPRI
Subjt:  VCLWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRI

Arabidopsis top hitse value%identityAlignment
AT4G04930.1 fatty acid desaturase family protein6.0e-3592.65Show/hide
Query:  VCLWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRI
        V  +GW+SFAYLILSTFVGGGMHPMAGHFISEHYVFNP+QETYSYYGPLNLLTWSVGYHNEHHDFPRI
Subjt:  VCLWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCACCGTCACCGTTTTGATGGCGGCGCTGCAACGAATGGGGACTCTCTACATGCGAGTTTGCCTTTGGGGCTGGAAGTCTTTTGCTTATCTGATCCTTTCCACATT
TGTTGGAGGAGGTATGCATCCAATGGCTGGTCACTTCATTTCAGAACATTATGTCTTCAACCCCGACCAGGAGACGTATTCGTACTACGGTCCGCTCAATCTTCTTACAT
GGAGCGTTGGTTACCACAATGAGCATCATGATTTCCCCAGGATTTCTATCACTGATAGATTCTATCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCACCGTCACCGTTTTGATGGCGGCGCTGCAACGAATGGGGACTCTCTACATGCGAGTTTGCCTTTGGGGCTGGAAGTCTTTTGCTTATCTGATCCTTTCCACATT
TGTTGGAGGAGGTATGCATCCAATGGCTGGTCACTTCATTTCAGAACATTATGTCTTCAACCCCGACCAGGAGACGTATTCGTACTACGGTCCGCTCAATCTTCTTACAT
GGAGCGTTGGTTACCACAATGAGCATCATGATTTCCCCAGGATTTCTATCACTGATAGATTCTATCAGTGA
Protein sequenceShow/hide protein sequence
MTTVTVLMAALQRMGTLYMRVCLWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNLLTWSVGYHNEHHDFPRISITDRFYQ