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Lag0012543 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012543
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptioncorneodesmosin
Genome locationchr1:42044696..42047587
RNA-Seq ExpressionLag0012543
SyntenyLag0012543
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_030053253.1 corneodesmosin [Microcaecilia unicolor]5.8e-0429.29Show/hide
Query:  GKSLGRPRNFPGLSSSVVVIPG-----CIHSSGKSLGGLEFPSLSSSIVVIPGVRTLFWGKAWGGLGISQGLSSSVVVIPGVRTLFWGKSLGRPGNFPSL
        G S  +   + G SS V+ +PG         S  S GG   PS SS ++ +PG  ++ +G + G  G     SS V+ +PG  ++ +G S G  G  PS 
Subjt:  GKSLGRPRNFPGLSSSVVVIPG-----CIHSSGKSLGGLEFPSLSSSIVVIPGVRTLFWGKAWGGLGISQGLSSSVVVIPGVRTLFWGKSLGRPGNFPSL

Query:  SSSIVVIPG-------VRTLFWGKAWGGLGISQASSACGH
        SS ++ + G         ++ +G +   +GI   SS   H
Subjt:  SSSIVVIPG-------VRTLFWGKAWGGLGISQASSACGH
TrEMBL top hitse value%identityAlignment
A0A6P7XL68 corneodesmosin2.8e-0429.29Show/hide
Query:  GKSLGRPRNFPGLSSSVVVIPG-----CIHSSGKSLGGLEFPSLSSSIVVIPGVRTLFWGKAWGGLGISQGLSSSVVVIPGVRTLFWGKSLGRPGNFPSL
        G S  +   + G SS V+ +PG         S  S GG   PS SS ++ +PG  ++ +G + G  G     SS V+ +PG  ++ +G S G  G  PS 
Subjt:  GKSLGRPRNFPGLSSSVVVIPG-----CIHSSGKSLGGLEFPSLSSSIVVIPGVRTLFWGKAWGGLGISQGLSSSVVVIPGVRTLFWGKSLGRPGNFPSL

Query:  SSSIVVIPG-------VRTLFWGKAWGGLGISQASSACGH
        SS ++ + G         ++ +G +   +GI   SS   H
Subjt:  SSSIVVIPG-------VRTLFWGKAWGGLGISQASSACGH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATGAAAAAAGGTGAGAGACTACAAAAGTGGTGTTGGTCGGCCTTGGCCACGGGAAGAGGCCGAGCACAGCTATCTCCCTTTCTGCTTGCCTGGTCGGCCTCGGC
CTCGGGAAGAGGCCGAGCATCATATTTTATAATTTCTCTTAGGGGCGTTGCCCCGAACCCCACCGGGCGCTTCGCCCTGGACCCCGACTCGCTGACCGAGCAGCGAGACC
CCCGTACTAGGTCATTCGAAACGATTCATTCCAGATCCGGGGCTTTTGCAGCTAGGATGCTCGGCCTCGGCCTTGGCATGAGGCTGAGCATTTCTTCTGCTTTGCTTGCT
ACTTTTCTCTGTTGTATCCATCCCGAGGGGGCGGAACTCGACCTTGGCCTCTGGATGGTCGGCCTCGGCCTTGGCATAAGGACGACCAGCTCCTCTGTGTTGTTCGCTTG
CTTGTTTTCCATTCCAAGGATACCTGGTCTGCGAAGTGACTACCGGACTCAGTCGAGCCCTATTCCTTGTCTAATGGTCGGCCTTAGCCTTGACATGAGGACGAGCGCTT
TTCCTGCAAGGTTTGAGAAGTTTGAGGGAAGCTTGGGGAGGCTTTGGGATTTCCCAAGGCCTCTCTTCAAGCATCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGG
AAAAGCTTGGGGAGGCCTAGGAATTTCCTAGGGCCTCTCTTCAAGCGTGGTGGTCATCACAGGGTGCGTACACTCTTCTGGGAAAAGCTTGGGAGGCCTGGGAATTTCCC
AAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTGGTGGTCATC
CCAGGGGTGCGTACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTGGGAATTTCCCAAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCTGGGG
AAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGCCTCTCTTCAAGCGTGGTGGTCATCCCAGGGTGCATACACTCTTCTGGGAAAAGCTTGGGAGGCCTGGAATTCCCAAG
CCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTGGTGGTCATCC
CAGGGGTGCGTACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTGGGAATTTCCCAAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCTGGGGA
AAAGCTTGGGGAGGCCTAGGAATTTCCCAGGCCTCTTCAGCGTGTGGTCATCCCAGGGTGCGTACACTCTTCTGGGAAAAGCTGGGAGGCCTGGGATTCCAGCCTCTTCA
AGCATCGTCGTCATCCCAGGGAGCATCTCCCTTTCGGCTTGAACCGCTTCGGCTACGACAACAGGTCAAGTGTTGTGGTCTTCCCAGGGGTGCGTACACTCCTCTGGGGA
AAACTTTGGGAGGCCAGGGAATCTCCCGAGTCTCTCTGCAAGCACTGTCAAAACTTTTGAAACGAAATTCAGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATGAAAAAAGGTGAGAGACTACAAAAGTGGTGTTGGTCGGCCTTGGCCACGGGAAGAGGCCGAGCACAGCTATCTCCCTTTCTGCTTGCCTGGTCGGCCTCGGC
CTCGGGAAGAGGCCGAGCATCATATTTTATAATTTCTCTTAGGGGCGTTGCCCCGAACCCCACCGGGCGCTTCGCCCTGGACCCCGACTCGCTGACCGAGCAGCGAGACC
CCCGTACTAGGTCATTCGAAACGATTCATTCCAGATCCGGGGCTTTTGCAGCTAGGATGCTCGGCCTCGGCCTTGGCATGAGGCTGAGCATTTCTTCTGCTTTGCTTGCT
ACTTTTCTCTGTTGTATCCATCCCGAGGGGGCGGAACTCGACCTTGGCCTCTGGATGGTCGGCCTCGGCCTTGGCATAAGGACGACCAGCTCCTCTGTGTTGTTCGCTTG
CTTGTTTTCCATTCCAAGGATACCTGGTCTGCGAAGTGACTACCGGACTCAGTCGAGCCCTATTCCTTGTCTAATGGTCGGCCTTAGCCTTGACATGAGGACGAGCGCTT
TTCCTGCAAGGTTTGAGAAGTTTGAGGGAAGCTTGGGGAGGCTTTGGGATTTCCCAAGGCCTCTCTTCAAGCATCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGG
AAAAGCTTGGGGAGGCCTAGGAATTTCCTAGGGCCTCTCTTCAAGCGTGGTGGTCATCACAGGGTGCGTACACTCTTCTGGGAAAAGCTTGGGAGGCCTGGGAATTTCCC
AAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTGGTGGTCATC
CCAGGGGTGCGTACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTGGGAATTTCCCAAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCTGGGG
AAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGCCTCTCTTCAAGCGTGGTGGTCATCCCAGGGTGCATACACTCTTCTGGGAAAAGCTTGGGAGGCCTGGAATTCCCAAG
CCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTGGTGGTCATCC
CAGGGGTGCGTACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTGGGAATTTCCCAAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCTGGGGA
AAAGCTTGGGGAGGCCTAGGAATTTCCCAGGCCTCTTCAGCGTGTGGTCATCCCAGGGTGCGTACACTCTTCTGGGAAAAGCTGGGAGGCCTGGGATTCCAGCCTCTTCA
AGCATCGTCGTCATCCCAGGGAGCATCTCCCTTTCGGCTTGAACCGCTTCGGCTACGACAACAGGTCAAGTGTTGTGGTCTTCCCAGGGGTGCGTACACTCCTCTGGGGA
AAACTTTGGGAGGCCAGGGAATCTCCCGAGTCTCTCTGCAAGCACTGTCAAAACTTTTGAAACGAAATTCAGAGTAA
Protein sequenceShow/hide protein sequence
MEMKKGERLQKWCWSALATGRGRAQLSPFLLAWSASASGRGRASYFIISLRGVAPNPTGRFALDPDSLTEQRDPRTRSFETIHSRSGAFAARMLGLGLGMRLSISSALLA
TFLCCIHPEGAELDLGLWMVGLGLGIRTTSSSVLFACLFSIPRIPGLRSDYRTQSSPIPCLMVGLSLDMRTSAFPARFEKFEGSLGRLWDFPRPLFKHHGHPRGAYTLLG
KSLGRPRNFLGPLFKRGGHHRVRTLFWEKLGRPGNFPSLSSSIVVIPGCVHSSGEKLGRPRNFPGPLFKRGGHPRGAYTLLGKKLGEAWEFPKPLFKHRRHPRGAYTLLG
KSLGRPRNFPGLSSSVVVIPGCIHSSGKSLGGLEFPSLSSSIVVIPGVRTLFWGKAWGGLGISQGLSSSVVVIPGVRTLFWGKSLGRPGNFPSLSSSIVVIPGVRTLFWG
KAWGGLGISQASSACGHPRVRTLFWEKLGGLGFQPLQASSSSQGASPFRLEPLRLRQQVKCCGLPRGAYTPLGKTLGGQGISRVSLQALSKLLKRNSE