CuGenDBv2

Gene ID	Lag0012570
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	myosin-11 isoform X3
Genome location	chr1:42290568..42294081
RNA-Seq Expression	Lag0012570
Synteny	Lag0012570
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022143944.1 uncharacterized protein LOC111013735 isoform X1 [Momordica charantia]

1.7e-36

84.31

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Query:  RIDAKACSLRETLDEKKIELPPSSGDHDNAIDDETTTSKEILQEILSQVQLCSKLEEFLLKKKLFNDEDSPQLHAEKVDKLRILSESLANSTLKAEKRIV
        RIDAKACSL+ETLDEKK EL PS GDHD++++DETTTSK IL+EILSQVQLCSKLEE L KKKLFN+ DSPQLHAEKV+KLR+LSESLANSTLKAEKRIV
Subjt:  RIDAKACSLRETLDEKKIELPPSSGDHDNAIDDETTTSKEILQEILSQVQLCSKLEEFLLKKKLFNDEDSPQLHAEKVDKLRILSESLANSTLKAEKRIV

Query:  DH
        DH
Subjt:  DH

XP_022143946.1 uncharacterized protein LOC111013735 isoform X2 [Momordica charantia]

5.9e-37

84.47

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Query:  RIDAKACSLRETLDEKKIELPPSSGDHDNAIDDETTTSKEILQEILSQVQLCSKLEEFLLKKKLFNDEDSPQLHAEKVDKLRILSESLANSTLKAEKRIV
        RIDAKACSL+ETLDEKK EL PS GDHD++++DETTTSK IL+EILSQVQLCSKLEE L KKKLFN+ DSPQLHAEKV+KLR+LSESLANSTLKAEKRIV
Subjt:  RIDAKACSLRETLDEKKIELPPSSGDHDNAIDDETTTSKEILQEILSQVQLCSKLEEFLLKKKLFNDEDSPQLHAEKVDKLRILSESLANSTLKAEKRIV

Query:  DHR
        DHR
Subjt:  DHR

XP_022143947.1 uncharacterized protein LOC111013735 isoform X3 [Momordica charantia]

1.7e-36

84.31

Show/hide

Query:  RIDAKACSLRETLDEKKIELPPSSGDHDNAIDDETTTSKEILQEILSQVQLCSKLEEFLLKKKLFNDEDSPQLHAEKVDKLRILSESLANSTLKAEKRIV
        RIDAKACSL+ETLDEKK EL PS GDHD++++DETTTSK IL+EILSQVQLCSKLEE L KKKLFN+ DSPQLHAEKV+KLR+LSESLANSTLKAEKRIV
Subjt:  RIDAKACSLRETLDEKKIELPPSSGDHDNAIDDETTTSKEILQEILSQVQLCSKLEEFLLKKKLFNDEDSPQLHAEKVDKLRILSESLANSTLKAEKRIV

Query:  DH
        DH
Subjt:  DH

XP_022978391.1 myosin-6-like [Cucurbita maxima]

2.9e-36

80.91

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Query:  RIDAKACSLRETLDEKKIELPPSSGDHDNAIDDETTTSKEILQEILSQVQLCSKLEEFLLKKKLFNDEDSPQLHAEKVDKLRILSESLANSTLKAEKRIV
        RIDAKACSL++TLDEKK E+PPSSGD DN  DD+TT+SK +LQEILSQVQL SKLEE LLKKKLFN+ DSPQLHAEKVDKLRILSESLANSTLKAEKRIV
Subjt:  RIDAKACSLRETLDEKKIELPPSSGDHDNAIDDETTTSKEILQEILSQVQLCSKLEEFLLKKKLFNDEDSPQLHAEKVDKLRILSESLANSTLKAEKRIV

Query:  DHRFVQYDLL
        D R  + D L
Subjt:  DHRFVQYDLL

XP_023544996.1 myosin-6-like [Cucurbita pepo subsp. pepo]

2.9e-36

80.91

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Query:  RIDAKACSLRETLDEKKIELPPSSGDHDNAIDDETTTSKEILQEILSQVQLCSKLEEFLLKKKLFNDEDSPQLHAEKVDKLRILSESLANSTLKAEKRIV
        RIDAKACSL++TLDEKK E+PPSSGD DN  DD+TT+SK +LQEILSQVQL SKLEE LLKKKLFN+ DSPQLHAEKVDKLRILSESLANSTLKAEKRIV
Subjt:  RIDAKACSLRETLDEKKIELPPSSGDHDNAIDDETTTSKEILQEILSQVQLCSKLEEFLLKKKLFNDEDSPQLHAEKVDKLRILSESLANSTLKAEKRIV

Query:  DHRFVQYDLL
        D R  + D L
Subjt:  DHRFVQYDLL

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CQU3 uncharacterized protein LOC111013735 isoform X1

8.3e-37

84.31

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Query:  RIDAKACSLRETLDEKKIELPPSSGDHDNAIDDETTTSKEILQEILSQVQLCSKLEEFLLKKKLFNDEDSPQLHAEKVDKLRILSESLANSTLKAEKRIV
        RIDAKACSL+ETLDEKK EL PS GDHD++++DETTTSK IL+EILSQVQLCSKLEE L KKKLFN+ DSPQLHAEKV+KLR+LSESLANSTLKAEKRIV
Subjt:  RIDAKACSLRETLDEKKIELPPSSGDHDNAIDDETTTSKEILQEILSQVQLCSKLEEFLLKKKLFNDEDSPQLHAEKVDKLRILSESLANSTLKAEKRIV

Query:  DH
        DH
Subjt:  DH

A0A6J1CRU2 uncharacterized protein LOC111013735 isoform X2

2.9e-37

84.47

Show/hide

Query:  RIDAKACSLRETLDEKKIELPPSSGDHDNAIDDETTTSKEILQEILSQVQLCSKLEEFLLKKKLFNDEDSPQLHAEKVDKLRILSESLANSTLKAEKRIV
        RIDAKACSL+ETLDEKK EL PS GDHD++++DETTTSK IL+EILSQVQLCSKLEE L KKKLFN+ DSPQLHAEKV+KLR+LSESLANSTLKAEKRIV
Subjt:  RIDAKACSLRETLDEKKIELPPSSGDHDNAIDDETTTSKEILQEILSQVQLCSKLEEFLLKKKLFNDEDSPQLHAEKVDKLRILSESLANSTLKAEKRIV

Query:  DHR
        DHR
Subjt:  DHR

A0A6J1CSA8 uncharacterized protein LOC111013735 isoform X3

8.3e-37

84.31

Show/hide

Query:  RIDAKACSLRETLDEKKIELPPSSGDHDNAIDDETTTSKEILQEILSQVQLCSKLEEFLLKKKLFNDEDSPQLHAEKVDKLRILSESLANSTLKAEKRIV
        RIDAKACSL+ETLDEKK EL PS GDHD++++DETTTSK IL+EILSQVQLCSKLEE L KKKLFN+ DSPQLHAEKV+KLR+LSESLANSTLKAEKRIV
Subjt:  RIDAKACSLRETLDEKKIELPPSSGDHDNAIDDETTTSKEILQEILSQVQLCSKLEEFLLKKKLFNDEDSPQLHAEKVDKLRILSESLANSTLKAEKRIV

Query:  DH
        DH
Subjt:  DH

A0A6J1GG85 myosin-6-like

1.4e-36

80.91

Show/hide

Query:  RIDAKACSLRETLDEKKIELPPSSGDHDNAIDDETTTSKEILQEILSQVQLCSKLEEFLLKKKLFNDEDSPQLHAEKVDKLRILSESLANSTLKAEKRIV
        RIDAKACSL++TLDEKK E+PPSSGD DN  DD+TT+SK +LQEILSQVQL SKLEE LLKKKLFN+ DSPQLHAEKVDKLRILSESLANSTLKAEKRIV
Subjt:  RIDAKACSLRETLDEKKIELPPSSGDHDNAIDDETTTSKEILQEILSQVQLCSKLEEFLLKKKLFNDEDSPQLHAEKVDKLRILSESLANSTLKAEKRIV

Query:  DHRFVQYDLL
        D R  + D L
Subjt:  DHRFVQYDLL

A0A6J1IMJ3 myosin-6-like

1.4e-36

80.91

Show/hide

Query:  RIDAKACSLRETLDEKKIELPPSSGDHDNAIDDETTTSKEILQEILSQVQLCSKLEEFLLKKKLFNDEDSPQLHAEKVDKLRILSESLANSTLKAEKRIV
        RIDAKACSL++TLDEKK E+PPSSGD DN  DD+TT+SK +LQEILSQVQL SKLEE LLKKKLFN+ DSPQLHAEKVDKLRILSESLANSTLKAEKRIV
Subjt:  RIDAKACSLRETLDEKKIELPPSSGDHDNAIDDETTTSKEILQEILSQVQLCSKLEEFLLKKKLFNDEDSPQLHAEKVDKLRILSESLANSTLKAEKRIV

Query:  DHRFVQYDLL
        D R  + D L
Subjt:  DHRFVQYDLL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G37370.1 unknown protein

7.7e-19

50.96

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Query:  SRIDAKACSLRETLDEKKIELPPSSGDHDNAIDDETTTSKEILQEILSQVQLCSKLEEFLLKKKLFNDEDSPQLHAEKVDKLRILSESLANSTLKAEKRI
        +RID +A +L E LD+ K+++   +   D +   +T  S E L+EIL QV+  SKLE  LL+KK  ++ D+ Q H EKVDKL++LSESL NST KAEKRI
Subjt:  SRIDAKACSLRETLDEKKIELPPSSGDHDNAIDDETTTSKEILQEILSQVQLCSKLEEFLLKKKLFNDEDSPQLHAEKVDKLRILSESLANSTLKAEKRI

Query:  VDHR
        +DHR
Subjt:  VDHR

AT5G13560.1 unknown protein

3.8e-18

44.64

Show/hide

Query:  RIDAKACSLRETLDEKKI-ELPPSSGDHDNAIDDETTTSKEILQEILSQVQLCSKLEEFLLKKKLFNDEDSPQLHAEKVDKLRILSESLANSTLKAEKRI
        RIDA+A  LR+ L++    ++P  S D ++    ET  + E  +E L++++LCS+LE  L++K+  ++ DSP +HA+KVDKLR+L ESLANST KAEKRI
Subjt:  RIDAKACSLRETLDEKKI-ELPPSSGDHDNAIDDETTTSKEILQEILSQVQLCSKLEEFLLKKKLFNDEDSPQLHAEKVDKLRILSESLANSTLKAEKRI

Query:  VDHRFVQYDLLR
         ++R  + + L+
Subjt:  VDHRFVQYDLLR

Sequences

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CDS sequence

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ATGGGAGGGTCAAGAATAGATGCTAAAGCGTGTAGTTTGAGAGAAACACTTGATGAAAAAAAAATAGAGCTGCCACCTTCAAGTGGAGACCATGATAACGCAATTGATGA
TGAAACTACAACTTCTAAGGAGATTCTACAAGAAATACTTTCACAAGTTCAATTATGTTCCAAGTTGGAGGAGTTCCTACTAAAGAAGAAGCTTTTTAATGATGAGGATT
CTCCACAGCTTCATGCTGAAAAGGTTGATAAACTGAGAATTTTGTCAGAATCTTTGGCAAATTCTACCTTGAAAGCTGAAAAGCGTATTGTAGACCACAGGTTCGTTCAA
TATGATCTTTTGAGAAGAGAAACAAATTTCATTGATGAATGA

mRNA sequence

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Protein sequence

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MGGSRIDAKACSLRETLDEKKIELPPSSGDHDNAIDDETTTSKEILQEILSQVQLCSKLEEFLLKKKLFNDEDSPQLHAEKVDKLRILSESLANSTLKAEKRIVDHRFVQ
YDLLRRETNFIDE

Lag0012570 (gene) of Sponge gourd (AG-4) v1 genome