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Lag0012575 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012575
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr1:42319306..42319794
RNA-Seq ExpressionLag0012575
SyntenyLag0012575
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047323.1 hypothetical protein E6C27_scaffold908G001440 [Cucumis melo var. makuwa]6.1e-5063.8Show/hide
Query:  MSYSGSNSIGLLMPNANSYDYTGMNPSPFFIMEFGFTSQDQSDGDPIEENLEGEQTYHSRFGYFPNELDSSNLFFNCQDPYGNQNGCGIEN-TELILFHN
        M Y+GS+SIGLLM NAN Y+Y+        I EFGF SQ QSDGDPI +N E EQTYHS +G+  NE++ ++LFFNC+ PYGNQNGC  E+ TELIL+ N
Subjt:  MSYSGSNSIGLLMPNANSYDYTGMNPSPFFIMEFGFTSQDQSDGDPIEENLEGEQTYHSRFGYFPNELDSSNLFFNCQDPYGNQNGCGIEN-TELILFHN

Query:  EDQLEDYNGDSRNLCHEFAWDYFQSWLGFGEDEHGNDCNGQDLKPEHDCSSDALALLEAILGY
        E+QLEDYNGDSRNL +EF+WD  + W G GE+E G + NGQ+L PE+DC SDALALLEAILGY
Subjt:  EDQLEDYNGDSRNLCHEFAWDYFQSWLGFGEDEHGNDCNGQDLKPEHDCSSDALALLEAILGY

KAG6595286.1 hypothetical protein SDJN03_11839, partial [Cucurbita argyrosperma subsp. sororia]9.8e-4865.03Show/hide
Query:  MSYSGSNSIGLLMPNANSYDYTGMNPSPFFIMEFGFTSQDQ-SDGDPIEENLEGEQTYHSRFGYFPNELDSSNLFFNCQDPYGNQNGCGIENTELILFHN
        M+ SGSNSIGLLM NANSYDY G +PSPF+    GFT Q Q SDGDPIE++ EG++T  S F    NELDSS+L FN QDPY NQ+GC +EN ELILFHN
Subjt:  MSYSGSNSIGLLMPNANSYDYTGMNPSPFFIMEFGFTSQDQ-SDGDPIEENLEGEQTYHSRFGYFPNELDSSNLFFNCQDPYGNQNGCGIENTELILFHN

Query:  EDQLEDYNGDSRNLCHEFAWDYFQSWLGFGEDEHGNDCNGQDLKPEHDCSSDALALLEAILGY
        EDQ EDY GD RNL +EF W  F+ W G GEDE   D NGQ+L+ E DCSS+A+ALLE+ILGY
Subjt:  EDQLEDYNGDSRNLCHEFAWDYFQSWLGFGEDEHGNDCNGQDLKPEHDCSSDALALLEAILGY

KGN54204.1 hypothetical protein Csa_017990 [Cucumis sativus]4.4e-4863.19Show/hide
Query:  MSYSGSNSIGLLMPNANSYDYTGMNPSPFFIMEFGFTSQDQSDGDPIEENLEGEQTYHSRFGYFPNELDSSNLFFNCQDPYGNQNGCGIEN-TELILFHN
        M Y+GS+SIGLLM NAN YD          I EFGF SQ QSDGDPI +N E EQ YHS +G+  NE++ ++LFFNC+  YGNQNGC  E+ TELIL+ N
Subjt:  MSYSGSNSIGLLMPNANSYDYTGMNPSPFFIMEFGFTSQDQSDGDPIEENLEGEQTYHSRFGYFPNELDSSNLFFNCQDPYGNQNGCGIEN-TELILFHN

Query:  EDQLEDYNGDSRNLCHEFAWDYFQSWLGFGEDEHGNDCNGQDLKPEHDCSSDALALLEAILGY
        E+QLEDYNGDSRNL +EF+WD  + W G GEDE G + NGQ+L PE+DC SDALALLEAILGY
Subjt:  EDQLEDYNGDSRNLCHEFAWDYFQSWLGFGEDEHGNDCNGQDLKPEHDCSSDALALLEAILGY

TrEMBL top hitse value%identityAlignment
A0A0A0KZF2 Uncharacterized protein2.1e-4863.19Show/hide
Query:  MSYSGSNSIGLLMPNANSYDYTGMNPSPFFIMEFGFTSQDQSDGDPIEENLEGEQTYHSRFGYFPNELDSSNLFFNCQDPYGNQNGCGIEN-TELILFHN
        M Y+GS+SIGLLM NAN YD          I EFGF SQ QSDGDPI +N E EQ YHS +G+  NE++ ++LFFNC+  YGNQNGC  E+ TELIL+ N
Subjt:  MSYSGSNSIGLLMPNANSYDYTGMNPSPFFIMEFGFTSQDQSDGDPIEENLEGEQTYHSRFGYFPNELDSSNLFFNCQDPYGNQNGCGIEN-TELILFHN

Query:  EDQLEDYNGDSRNLCHEFAWDYFQSWLGFGEDEHGNDCNGQDLKPEHDCSSDALALLEAILGY
        E+QLEDYNGDSRNL +EF+WD  + W G GEDE G + NGQ+L PE+DC SDALALLEAILGY
Subjt:  EDQLEDYNGDSRNLCHEFAWDYFQSWLGFGEDEHGNDCNGQDLKPEHDCSSDALALLEAILGY

A0A5A7TUT5 Uncharacterized protein3.0e-5063.8Show/hide
Query:  MSYSGSNSIGLLMPNANSYDYTGMNPSPFFIMEFGFTSQDQSDGDPIEENLEGEQTYHSRFGYFPNELDSSNLFFNCQDPYGNQNGCGIEN-TELILFHN
        M Y+GS+SIGLLM NAN Y+Y+        I EFGF SQ QSDGDPI +N E EQTYHS +G+  NE++ ++LFFNC+ PYGNQNGC  E+ TELIL+ N
Subjt:  MSYSGSNSIGLLMPNANSYDYTGMNPSPFFIMEFGFTSQDQSDGDPIEENLEGEQTYHSRFGYFPNELDSSNLFFNCQDPYGNQNGCGIEN-TELILFHN

Query:  EDQLEDYNGDSRNLCHEFAWDYFQSWLGFGEDEHGNDCNGQDLKPEHDCSSDALALLEAILGY
        E+QLEDYNGDSRNL +EF+WD  + W G GE+E G + NGQ+L PE+DC SDALALLEAILGY
Subjt:  EDQLEDYNGDSRNLCHEFAWDYFQSWLGFGEDEHGNDCNGQDLKPEHDCSSDALALLEAILGY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTATAGTGGCTCTAACTCCATTGGCCTGCTCATGCCAAATGCAAACAGCTACGACTACACTGGTATGAACCCCTCTCCATTTTTTATCATGGAGTTCGGTTTCAC
AAGCCAAGACCAGTCTGATGGAGACCCAATTGAAGAAAATCTTGAGGGTGAGCAGACTTACCACAGTCGTTTCGGGTATTTTCCGAATGAGCTCGACTCCTCCAATCTCT
TCTTCAATTGCCAAGACCCTTATGGCAATCAAAATGGCTGCGGAATAGAGAATACAGAACTCATTCTCTTCCACAATGAGGATCAACTTGAAGATTACAATGGTGATTCT
AGAAACTTGTGCCATGAATTTGCTTGGGATTACTTTCAATCTTGGTTAGGATTTGGAGAAGATGAGCATGGTAATGACTGCAATGGGCAAGACTTGAAACCTGAACATGA
CTGCAGTTCTGATGCCTTGGCCCTCCTAGAAGCCATCCTGGGATACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTATAGTGGCTCTAACTCCATTGGCCTGCTCATGCCAAATGCAAACAGCTACGACTACACTGGTATGAACCCCTCTCCATTTTTTATCATGGAGTTCGGTTTCAC
AAGCCAAGACCAGTCTGATGGAGACCCAATTGAAGAAAATCTTGAGGGTGAGCAGACTTACCACAGTCGTTTCGGGTATTTTCCGAATGAGCTCGACTCCTCCAATCTCT
TCTTCAATTGCCAAGACCCTTATGGCAATCAAAATGGCTGCGGAATAGAGAATACAGAACTCATTCTCTTCCACAATGAGGATCAACTTGAAGATTACAATGGTGATTCT
AGAAACTTGTGCCATGAATTTGCTTGGGATTACTTTCAATCTTGGTTAGGATTTGGAGAAGATGAGCATGGTAATGACTGCAATGGGCAAGACTTGAAACCTGAACATGA
CTGCAGTTCTGATGCCTTGGCCCTCCTAGAAGCCATCCTGGGATACTAA
Protein sequenceShow/hide protein sequence
MSYSGSNSIGLLMPNANSYDYTGMNPSPFFIMEFGFTSQDQSDGDPIEENLEGEQTYHSRFGYFPNELDSSNLFFNCQDPYGNQNGCGIENTELILFHNEDQLEDYNGDS
RNLCHEFAWDYFQSWLGFGEDEHGNDCNGQDLKPEHDCSSDALALLEAILGY