; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0012593 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012593
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionZinc finger CCCH domain-containing protein 11
Genome locationchr1:42500772..42505870
RNA-Seq ExpressionLag0012593
SyntenyLag0012593
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0005829 - cytosol (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER57304.1 zinc finger CCCH domain-containing protein 11 [Striga asiatica]2.8e-1639.05Show/hide
Query:  VCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAGYVLK--LKALLKKGTEKISIEEGMENQVS---------------------------------
        VC YFL+A EKK++GWFW  P  NGG  CHYRH L  GYV+K  +KALL++ ++KISIEE +ENQ +                                 
Subjt:  VCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAGYVLK--LKALLKKGTEKISIEEGMENQVS---------------------------------

Query:  -------------DNFEDRPTTSVTVNGDQTIS----HEDGDDDDLELDDLIELKASLSKTEMQIQELG
                     D   DRP +S +   D   +     ED DDDDL++D+L EL+ASLS+T +QI+E G
Subjt:  -------------DNFEDRPTTSVTVNGDQTIS----HEDGDDDDLELDDLIELKASLSKTEMQIQELG

KAG1337971.1 zinc finger CCCH domain-containing protein 11 [Cocos nucifera]1.2e-1435.35Show/hide
Query:  VCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAGYVLK--LKALLKKGTEKISIEEGMENQ-----------------------------------
        VC YFL+A EKK++GWFW  P  NGG  CHYRH L  GYVLK  +KALL++ TEKISIEE +ENQ                                   
Subjt:  VCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAGYVLK--LKALLKKGTEKISIEEGMENQ-----------------------------------

Query:  --------------------------------------------VSDNFEDRPTTSVTVNGDQTISHEDGDDDD--LELDDLIELKASLSKTEMQIQE
                                                     ++N  +RP+TS +V+ D+ +  E GDDDD  L++D+L EL+ASLSKT +QI+E
Subjt:  --------------------------------------------VSDNFEDRPTTSVTVNGDQTISHEDGDDDD--LELDDLIELKASLSKTEMQIQE

XP_008783661.1 zinc finger CCCH domain-containing protein 11-like isoform X1 [Phoenix dactylifera]7.0e-1534.17Show/hide
Query:  VCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAGYVLK--LKALLKKGTEKISIEEGMENQ-----------------------------------
        VC YFL+A EKK++GWFW  P  NGG  CHYRH L  GYVLK  +KALL++ TEKISIEE +ENQ                                   
Subjt:  VCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAGYVLK--LKALLKKGTEKISIEEGMENQ-----------------------------------

Query:  --------------------------------------------VSDNFEDRPTTSVTVNGDQTISHEDGDDDDLELDDLIELKASLSKTEMQIQELGV
                                                     ++N  +RP+TS +V+ D      D DDD+L++D+L EL+ASL KT +QI+E G+
Subjt:  --------------------------------------------VSDNFEDRPTTSVTVNGDQTISHEDGDDDDLELDDLIELKASLSKTEMQIQELGV

XP_020267396.1 zinc finger CCCH domain-containing protein 11-like [Asparagus officinalis]2.0e-1436.32Show/hide
Query:  VCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAGYVLK--LKALLKKGTEKISIEEGMENQ-----------------------------------
        VC YFLDA EKK++GWFW  P  NGG  CHYRH L  GYVLK  +KALL++ TEKISIEE +ENQ                                   
Subjt:  VCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAGYVLK--LKALLKKGTEKISIEEGMENQ-----------------------------------

Query:  --------------VSD----------------NFEDRPTTSVTV------NGDQTISH----------EDGDDDDLELDDLIELKASLSKTEMQIQELG
                      +SD                  ED   T   V       G  T++H          E+ DDD+L+LD+L EL+ASLSKT +QI E G
Subjt:  --------------VSD----------------NFEDRPTTSVTV------NGDQTISH----------EDGDDDDLELDDLIELKASLSKTEMQIQELG

Query:  V
        +
Subjt:  V

XP_023905774.1 zinc finger CCCH domain-containing protein 21-like [Quercus suber]3.5e-1434.5Show/hide
Query:  VCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAGYVLK--LKALLKKGTEKISIEEGMENQ-----------------------------------
        VC YFLDA EKK++GWFW  P  NGG  CHYRH L  GY+LK  +KALL++ ++KI IEE +ENQ                                   
Subjt:  VCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAGYVLK--LKALLKKGTEKISIEEGMENQ-----------------------------------

Query:  -------------------------------------------VSDNF-EDRPTTSV-TVNGDQTISHEDGDDDDLELDDLIELKASLSKTEMQIQELGV
                                                   V D+     P+TS  TVN  +  S +D DDD+L+LD+L EL+ASLSKT +QI+E G+
Subjt:  -------------------------------------------VSDNF-EDRPTTSV-TVNGDQTISHEDGDDDDLELDDLIELKASLSKTEMQIQELGV

TrEMBL top hitse value%identityAlignment
A0A151R1I1 Zinc finger CCCH domain-containing protein 111.7e-1434.85Show/hide
Query:  VCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAGYVLK--LKALLKKGTEKISIEEGMENQVS---------------------------------
        VC YFLDA EKK++GWFW+ P  NGG  CHYRH L  GY+LK  +KALL++ +EKISIEE +ENQ +                                 
Subjt:  VCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAGYVLK--LKALLKKGTEKISIEEGMENQVS---------------------------------

Query:  ----------------------------------------------DNFEDRPTTSVTVNGDQTISHEDGDDDDLELDDLIELKASLSKTEMQIQELG
                                                      +  ED P+TS T  GD  I  +  DDD+L++D+L EL+ASLSKT +QI+E G
Subjt:  ----------------------------------------------DNFEDRPTTSVTVNGDQTISHEDGDDDDLELDDLIELKASLSKTEMQIQELG

A0A1S3TDR6 zinc finger CCCH domain-containing protein 211.7e-1434.34Show/hide
Query:  VCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAGYVLK--LKALLKKGTEKISIEEGMENQ----------VSDNF--------------------
        VC YFLDA EKK++GWFWE P  NGG  CHYRH L  GYVLK  +KALL++  +K+SIEE +ENQ            D F                    
Subjt:  VCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAGYVLK--LKALLKKGTEKISIEEGMENQ----------VSDNF--------------------

Query:  -------------------------------------------------EDRPTTSVTVNGDQTISHEDGDDDDLELDDLIELKASLSKTEMQIQELG
                                                         +D P+TS   +G + +   D DDD+L+LD+L EL+ASL+KT +QI+E G
Subjt:  -------------------------------------------------EDRPTTSVTVNGDQTISHEDGDDDDLELDDLIELKASLSKTEMQIQELG

A0A5A7RJG9 Zinc finger CCCH domain-containing protein 111.4e-1639.05Show/hide
Query:  VCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAGYVLK--LKALLKKGTEKISIEEGMENQVS---------------------------------
        VC YFL+A EKK++GWFW  P  NGG  CHYRH L  GYV+K  +KALL++ ++KISIEE +ENQ +                                 
Subjt:  VCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAGYVLK--LKALLKKGTEKISIEEGMENQVS---------------------------------

Query:  -------------DNFEDRPTTSVTVNGDQTIS----HEDGDDDDLELDDLIELKASLSKTEMQIQELG
                     D   DRP +S +   D   +     ED DDDDL++D+L EL+ASLS+T +QI+E G
Subjt:  -------------DNFEDRPTTSVTVNGDQTIS----HEDGDDDDLELDDLIELKASLSKTEMQIQELG

A0A5P1ET01 Uncharacterized protein9.8e-1536.32Show/hide
Query:  VCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAGYVLK--LKALLKKGTEKISIEEGMENQ-----------------------------------
        VC YFLDA EKK++GWFW  P  NGG  CHYRH L  GYVLK  +KALL++ TEKISIEE +ENQ                                   
Subjt:  VCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAGYVLK--LKALLKKGTEKISIEEGMENQ-----------------------------------

Query:  --------------VSD----------------NFEDRPTTSVTV------NGDQTISH----------EDGDDDDLELDDLIELKASLSKTEMQIQELG
                      +SD                  ED   T   V       G  T++H          E+ DDD+L+LD+L EL+ASLSKT +QI E G
Subjt:  --------------VSD----------------NFEDRPTTSVTV------NGDQTISH----------EDGDDDDLELDDLIELKASLSKTEMQIQELG

Query:  V
        +
Subjt:  V

W9RFQ8 Zinc finger CCCH domain-containing protein 112.2e-1432.7Show/hide
Query:  QAREEAELLHLQVCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAGYVLK--LKALLKKGTEKISIEEGMENQ-----------------------
        +++E  E +  +VC YFL+A EKK++GWFW  P  NGG  CHYRH L  GYVLK  +KALL++ TEKI+IEE +ENQ                       
Subjt:  QAREEAELLHLQVCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAGYVLK--LKALLKKGTEKISIEEGMENQ-----------------------

Query:  --------------------------VSD--------------------NFEDRPTTSVTVNGDQT----------ISHEDGDDDDLELDDLIELKASLS
                                  +SD                    + E++ + S+   G  T          +S  D D+D+L++D+L EL+ASLS
Subjt:  --------------------------VSD--------------------NFEDRPTTSVTVNGDQT----------ISHEDGDDDDLELDDLIELKASLS

Query:  KTEMQIQELGV
        KT +QI+E G+
Subjt:  KTEMQIQELGV

SwissProt top hitse value%identityAlignment
A8WMM4 Zinc finger CCCH domain-containing protein 15 homolog3.1e-1052.31Show/hide
Query:  VCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAGYVLK--LKALLKKGTEKISIEEGMENQ
        VC YFL+A E  ++GWFWE P  NGG+ C YRH L  GYVLK   KA+  +  ++ISIEE +E +
Subjt:  VCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAGYVLK--LKALLKKGTEKISIEEGMENQ

Q0JHZ2 Zinc finger CCCH domain-containing protein 111.2e-1429.1Show/hide
Query:  RRGQELPAQKTRTRAKMCRSMSRDAIGSTQAREEAELLHLQ----VCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAGYVLK--LKALLKKGTEK
        R+G+++     +  A+      ++ +    A + AE    +    VC YFLDA EKK++GWFW  P  NGG  CHYRH L  GYVLK  +KALL++ +EK
Subjt:  RRGQELPAQKTRTRAKMCRSMSRDAIGSTQAREEAELLHLQ----VCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAGYVLK--LKALLKKGTEK

Query:  ISIEEGMENQ-----------------------------------------------------------------------------VSDNFEDRPTTSV
        I+IE+ +E+Q                                                                              S+  +D   +S 
Subjt:  ISIEEGMENQ-----------------------------------------------------------------------------VSDNFEDRPTTSV

Query:  TVNGDQTISHEDGD---DDDLELDDLIELKASLSKTEMQIQELG
        T NG +    +D D   DDDL++D+L EL+ASLS+T +QI+E G
Subjt:  TVNGDQTISHEDGD---DDDLELDDLIELKASLSKTEMQIQELG

Q54DA5 Zinc finger CCCH domain-containing protein 15 homolog1.8e-0525.57Show/hide
Query:  PSTWESLKPISHDGIKSSSDAS---RMGNPSLTRASKAPRMPLDKDPSG-HNDEGPMKDDEEEQKGMGQPIQQRTNH-PISRRSQDKFKSGISARSVPSR
        P   +S K +  +  K   D +   +  N S   A+   ++      SG  N E  +K+  +  K + +  ++      ++   Q K   G+  +S+   
Subjt:  PSTWESLKPISHDGIKSSSDAS---RMGNPSLTRASKAPRMPLDKDPSG-HNDEGPMKDDEEEQKGMGQPIQQRTNH-PISRRSQDKFKSGISARSVPSR

Query:  TRLTPLVNDRFL--LIVPTGNRCDRTVQISDPAEATIERRLGKVAEDRRGQELPAQKTRTRAKMCRSMSRDAIGSTQAREEAELLHLQVCNYFLDAEEKK
              V + F   +  P GNRC    + +    A  +     +  DRR  E    +    AK+   + +      +A+  A      +C +FLDA E K
Subjt:  TRLTPLVNDRFL--LIVPTGNRCDRTVQISDPAEATIERRLGKVAEDRRGQELPAQKTRTRAKMCRSMSRDAIGSTQAREEAELLHLQVCNYFLDAEEKK

Query:  RHGWFWERPKSNGGNVCHYRHVLFAGYVLKLKALLKKG-TEKISIEEGMENQVSDNFEDRPTTSVTV---NGDQTISHEDG--DDDDLELDDLIELKASL
        ++GWFWE P  NGG  C Y+H L  GY LK K   ++   E+I IEE +E + +   +  P T  T      ++ +  E    D  D  L D+   K S+
Subjt:  RHGWFWERPKSNGGNVCHYRHVLFAGYVLKLKALLKKG-TEKISIEEGMENQVSDNFEDRPTTSVTV---NGDQTISHEDG--DDDDLELDDLIELKASL

Query:  SKTEM
        S  EM
Subjt:  SKTEM

Q93618 Zinc finger CCCH domain-containing protein 15 homolog2.4e-1052.31Show/hide
Query:  VCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAGYVLK--LKALLKKGTEKISIEEGMENQ
        VC YFL+A E  ++GWFWE P  NGG  C YRH L  GYVLK   KA+ ++  ++ISIEE +E +
Subjt:  VCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAGYVLK--LKALLKKGTEKISIEEGMENQ

Q9SK74 Zinc finger CCCH domain-containing protein 213.4e-1229.76Show/hide
Query:  VCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAGYVLK--LKALL-KKGTEKISIEEGMENQ----------------------------------
        VC YFLDA EKK++GWFW  P  NGG  CHYRH L  GYVLK  +KALL ++ ++K+++E+ +EN+                                  
Subjt:  VCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAGYVLK--LKALL-KKGTEKISIEEGMENQ----------------------------------

Query:  -----------------------------------------------------VSDNFEDRPTTSVTVNGDQTISHEDGDDDDLELDDLIELKASLSKTE
                                                              S +  D   +S  VN ++    +D DDDDL++D+L EL+ASLSKT 
Subjt:  -----------------------------------------------------VSDNFEDRPTTSVTVNGDQTISHEDGDDDDLELDDLIELKASLSKTE

Query:  MQIQE
        +QI+E
Subjt:  MQIQE

Arabidopsis top hitse value%identityAlignment
AT2G20280.1 Zinc finger C-x8-C-x5-C-x3-H type family protein2.4e-1329.76Show/hide
Query:  VCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAGYVLK--LKALL-KKGTEKISIEEGMENQ----------------------------------
        VC YFLDA EKK++GWFW  P  NGG  CHYRH L  GYVLK  +KALL ++ ++K+++E+ +EN+                                  
Subjt:  VCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAGYVLK--LKALL-KKGTEKISIEEGMENQ----------------------------------

Query:  -----------------------------------------------------VSDNFEDRPTTSVTVNGDQTISHEDGDDDDLELDDLIELKASLSKTE
                                                              S +  D   +S  VN ++    +D DDDDL++D+L EL+ASLSKT 
Subjt:  -----------------------------------------------------VSDNFEDRPTTSVTVNGDQTISHEDGDDDDLELDDLIELKASLSKTE

Query:  MQIQE
        +QI+E
Subjt:  MQIQE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCTCAACATGGGAATCTTTGAAACCCATCTCTCACGATGGCATCAAAAGCTCATCGGATGCCTCTCGTATGGGAAACCCATCTCTCACGAGAGCATCAAAAGCTCC
TCGGATGCCTCTCGATAAAGATCCATCGGGCCACAATGATGAAGGCCCAATGAAGGACGATGAGGAGGAACAAAAAGGTATGGGCCAACCCATACAACAAAGGACAAACC
ATCCAATTTCTAGAAGGAGTCAGGACAAGTTCAAGTCTGGAATTTCCGCGCGAAGTGTGCCTTCTCGCACACGTCTTACTCCATTAGTGAACGACCGATTCTTGCTCATT
GTACCGACTGGAAACCGATGCGATAGAACTGTCCAGATATCAGATCCCGCTGAAGCAACAATCGAGAGGCGATTAGGCAAAGTTGCAGAAGATCGTAGAGGACAAGAACT
TCCGGCTCAAAAAACAAGAACAAGAGCAAAAATGTGCCGAAGTATGTCCAGAGATGCAATCGGGTCAACTCAAGCCCGCGAAGAGGCTGAACTTCTTCATTTGCAGGTTT
GCAACTACTTCTTGGATGCTGAGGAGAAGAAACGACATGGTTGGTTTTGGGAACGCCCAAAATCAAATGGTGGCAACGTCTGTCATTATAGGCATGTTCTATTTGCTGGA
TACGTTTTAAAACTGAAAGCTCTTTTAAAAAAGGGGACTGAAAAGATATCTATTGAGGAGGGGATGGAAAATCAGGTAAGTGACAATTTTGAAGACAGACCAACTACCTC
AGTGACCGTCAATGGTGATCAAACTATTTCTCATGAAGATGGCGATGATGATGACCTGGAATTGGATGATCTAATTGAGCTGAAAGCAAGCTTGTCAAAGACAGAAATGC
AAATACAAGAGTTAGGCGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCTCAACATGGGAATCTTTGAAACCCATCTCTCACGATGGCATCAAAAGCTCATCGGATGCCTCTCGTATGGGAAACCCATCTCTCACGAGAGCATCAAAAGCTCC
TCGGATGCCTCTCGATAAAGATCCATCGGGCCACAATGATGAAGGCCCAATGAAGGACGATGAGGAGGAACAAAAAGGTATGGGCCAACCCATACAACAAAGGACAAACC
ATCCAATTTCTAGAAGGAGTCAGGACAAGTTCAAGTCTGGAATTTCCGCGCGAAGTGTGCCTTCTCGCACACGTCTTACTCCATTAGTGAACGACCGATTCTTGCTCATT
GTACCGACTGGAAACCGATGCGATAGAACTGTCCAGATATCAGATCCCGCTGAAGCAACAATCGAGAGGCGATTAGGCAAAGTTGCAGAAGATCGTAGAGGACAAGAACT
TCCGGCTCAAAAAACAAGAACAAGAGCAAAAATGTGCCGAAGTATGTCCAGAGATGCAATCGGGTCAACTCAAGCCCGCGAAGAGGCTGAACTTCTTCATTTGCAGGTTT
GCAACTACTTCTTGGATGCTGAGGAGAAGAAACGACATGGTTGGTTTTGGGAACGCCCAAAATCAAATGGTGGCAACGTCTGTCATTATAGGCATGTTCTATTTGCTGGA
TACGTTTTAAAACTGAAAGCTCTTTTAAAAAAGGGGACTGAAAAGATATCTATTGAGGAGGGGATGGAAAATCAGGTAAGTGACAATTTTGAAGACAGACCAACTACCTC
AGTGACCGTCAATGGTGATCAAACTATTTCTCATGAAGATGGCGATGATGATGACCTGGAATTGGATGATCTAATTGAGCTGAAAGCAAGCTTGTCAAAGACAGAAATGC
AAATACAAGAGTTAGGCGTCTGA
Protein sequenceShow/hide protein sequence
MPSTWESLKPISHDGIKSSSDASRMGNPSLTRASKAPRMPLDKDPSGHNDEGPMKDDEEEQKGMGQPIQQRTNHPISRRSQDKFKSGISARSVPSRTRLTPLVNDRFLLI
VPTGNRCDRTVQISDPAEATIERRLGKVAEDRRGQELPAQKTRTRAKMCRSMSRDAIGSTQAREEAELLHLQVCNYFLDAEEKKRHGWFWERPKSNGGNVCHYRHVLFAG
YVLKLKALLKKGTEKISIEEGMENQVSDNFEDRPTTSVTVNGDQTISHEDGDDDDLELDDLIELKASLSKTEMQIQELGV