; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0012648 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012648
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNA polymerase sigma factor sigF
Genome locationchr1:42948084..42951673
RNA-Seq ExpressionLag0012648
SyntenyLag0012648
Gene Ontology termsGO:0071482 - cellular response to light stimulus (biological process)
GO:2000142 - regulation of DNA-templated transcription, initiation (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0016987 - sigma factor activity (molecular function)
InterPro domainsIPR003323 - OTU domain
IPR038765 - Papain-like cysteine peptidase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034558.1 OTU domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]6.0e-15489.49Show/hide
Query:  MNDYDSDAIRWGLRFFNGDSSYSTEYYPDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQASNFALGWNNPSSR
        MNDYDSDAI WGLR FNGDSSYS+EY+PDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSN  +PSQAS + LGW+NPSSR
Subjt:  MNDYDSDAIRWGLRFFNGDSSYSTEYYPDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQASNFALGWNNPSSR

Query:  NYGSENDSVEDEVETVEPSSSCSSPGQEDNYYPYGHDNQVDWKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFRALSD
        NYGSENDS+ED VETVE SSSCSSPGQED+YYP+GHD+QVDWKMDQ+IPAPHVPRINGEIP IDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFRALSD
Subjt:  NYGSENDSVEDEVETVEPSSSCSSPGQEDNYYPYGHDNQVDWKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFRALSD

Query:  QLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQVNLTGGR
        QLFGTS RHKLVRENVV QLKS REIYEGYVPMAYDDYLEKMSM+GEWGDHVTLQAA+DWYGVKIFVMTSFKE CCIEI+P+FQKK+QV L  GR
Subjt:  QLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQVNLTGGR

XP_022978801.1 RNA polymerase sigma factor sigF, chloroplastic [Cucurbita maxima]3.9e-15379.46Show/hide
Query:  MNDYDSDAIRWGLRFFNGDSSYSTEYYPDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQASNFALGWNNPSSR
        MNDYDSDAI WGLR FNGDSSYS+EY+PDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSN  +PSQAS +ALGW+NPSSR
Subjt:  MNDYDSDAIRWGLRFFNGDSSYSTEYYPDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQASNFALGWNNPSSR

Query:  NYGSENDSVEDEVETVEPSSSCSSPGQEDNYYPYGHDNQVDWKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFRALSD
        NYGSENDS+ED VETVE SSSCSSPGQED+YYP+GHD+QVDWKMDQ+IPAPHVPRINGEIP IDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFRALSD
Subjt:  NYGSENDSVEDEVETVEPSSSCSSPGQEDNYYPYGHDNQVDWKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFRALSD

Query:  QLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQVNLTG--GRCHF
        QLFGTS RHKLVRENVV QLKS REIYEGYVPMAYDDYLEKMSM+GEWGDHVTLQAA+DWYGVKIFVMTSFKE CCIEI+P+FQKK+QV         H+
Subjt:  QLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQVNLTG--GRCHF

Query:  PELLGRGALQFNLSSRSSIFTQMFPQLQMSNQMTPE
          +  +    F+       F+  F   +  ++  P+
Subjt:  PELLGRGALQFNLSSRSSIFTQMFPQLQMSNQMTPE

XP_038882896.1 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 10-like isoform X1 [Benincasa hispida]4.2e-15591.81Show/hide
Query:  MNDYDSDAIRWGLRFFNGDS----SYSTEYYPDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQASNFALGWNN
        MNDYDSDAIRWGLRFFNGDS    SYSTEY+PDMAQHDVNFYEHYYGNH NNEVNHVENDEIIA TLQEEFSQLE+AEASGYSN  +PSQAS FALGWNN
Subjt:  MNDYDSDAIRWGLRFFNGDS----SYSTEYYPDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQASNFALGWNN

Query:  PSSRNYGSENDSVEDEVETVEPSSSCSSPGQEDNYYPYGHDNQVDWKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFR
        PSSRNY SENDSVEDE+ETVEPSSSCSSPGQEDNYYP GHDNQVDWKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFR
Subjt:  PSSRNYGSENDSVEDEVETVEPSSSCSSPGQEDNYYPYGHDNQVDWKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFR

Query:  ALSDQLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQV
        ALSDQLFGTS+RHK+VRENVV QLKS REIYEGYVPMAYDDYLEKMSM+GEWGDHVTLQAA+DWYGVKIFVMTSFK+ CCIEI+PNFQKKKQV
Subjt:  ALSDQLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQV

XP_038882898.1 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12-like isoform X2 [Benincasa hispida]4.2e-15591.81Show/hide
Query:  MNDYDSDAIRWGLRFFNGDS----SYSTEYYPDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQASNFALGWNN
        MNDYDSDAIRWGLRFFNGDS    SYSTEY+PDMAQHDVNFYEHYYGNH NNEVNHVENDEIIA TLQEEFSQLE+AEASGYSN  +PSQAS FALGWNN
Subjt:  MNDYDSDAIRWGLRFFNGDS----SYSTEYYPDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQASNFALGWNN

Query:  PSSRNYGSENDSVEDEVETVEPSSSCSSPGQEDNYYPYGHDNQVDWKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFR
        PSSRNY SENDSVEDE+ETVEPSSSCSSPGQEDNYYP GHDNQVDWKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFR
Subjt:  PSSRNYGSENDSVEDEVETVEPSSSCSSPGQEDNYYPYGHDNQVDWKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFR

Query:  ALSDQLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQV
        ALSDQLFGTS+RHK+VRENVV QLKS REIYEGYVPMAYDDYLEKMSM+GEWGDHVTLQAA+DWYGVKIFVMTSFK+ CCIEI+PNFQKKKQV
Subjt:  ALSDQLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQV

XP_038882899.1 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12-like isoform X3 [Benincasa hispida]1.6e-15491.78Show/hide
Query:  MNDYDSDAIRWGLRFFNGDS----SYSTEYYPDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQASNFALGWNN
        MNDYDSDAIRWGLRFFNGDS    SYSTEY+PDMAQHDVNFYEHYYGNH NNEVNHVENDEIIA TLQEEFSQLE+AEASGYSN  +PSQAS FALGWNN
Subjt:  MNDYDSDAIRWGLRFFNGDS----SYSTEYYPDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQASNFALGWNN

Query:  PSSRNYGSENDSVEDEVETVEPSSSCSSPGQEDNYYPYGHDNQVDWKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFR
        PSSRNY SENDSVEDE+ETVEPSSSCSSPGQEDNYYP GHDNQVDWKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFR
Subjt:  PSSRNYGSENDSVEDEVETVEPSSSCSSPGQEDNYYPYGHDNQVDWKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFR

Query:  ALSDQLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQ
        ALSDQLFGTS+RHK+VRENVV QLKS REIYEGYVPMAYDDYLEKMSM+GEWGDHVTLQAA+DWYGVKIFVMTSFK+ CCIEI+PNFQKKKQ
Subjt:  ALSDQLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQ

TrEMBL top hitse value%identityAlignment
A0A0A0KIE6 OTU domain-containing protein6.1e-16086.4Show/hide
Query:  MNDYDSDAIRWGLRFFNGDSS--------YSTEYYPDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQASNFAL
        MNDYDSDAIRWGLRFFNGDS+        YSTEY PD AQHDVNFYEHYYGN+ NNEVN+VENDEIIAHTLQEEFSQLEIAEASGYSN  +PSQAS FAL
Subjt:  MNDYDSDAIRWGLRFFNGDSS--------YSTEYYPDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQASNFAL

Query:  GWNNPSSRNYGSENDSVEDEVETVEPSSSCSSPGQEDNYYPYGHDNQVDWKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGN
        GWNNPSSRNY SENDSVEDEVETVEPSSSCSSPGQ DNYYPYGHDNQVDW+MDQMIPAPHVPRINGEIP IDEVTSDHQRLLDRLKVYDFVERKVKGDGN
Subjt:  GWNNPSSRNYGSENDSVEDEVETVEPSSSCSSPGQEDNYYPYGHDNQVDWKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGN

Query:  CQFRALSDQLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQ----
        CQFRALSDQLFGTS+RHKLVRENVV QLKS REIYEGYVPM YDDYLEKMSMSGEWGDHVTLQAA+DWYGVKIFVMTSFKE CCIEI+PNFQKKKQ    
Subjt:  CQFRALSDQLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQ----

Query:  -----VNLTGGRCHFPELLGRGALQFNLSSR
               L     HFPELLGRGALQFNLSSR
Subjt:  -----VNLTGGRCHFPELLGRGALQFNLSSR

A0A1S4E3S8 RNA polymerase sigma factor sigF, chloroplastic isoform X15.5e-15380.06Show/hide
Query:  MNDYDSDAIRWGLRFFNGDSS----YSTEYYPDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQASNFALGWNN
        MNDYDSDAIRWGLRFFNGD +    YSTEY P  AQ DVNFYEHYYGNHCNNEVN+VENDEIIAHTLQEEFSQLEIAEASGYSN  +PS AS FALGWNN
Subjt:  MNDYDSDAIRWGLRFFNGDSS----YSTEYYPDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQASNFALGWNN

Query:  PSSRNYGSENDSVEDEVETVEPSSSCSSPGQEDNYYPYGHDNQVDWKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFR
        PSSR Y SENDSVEDEVETVEPSSSCSSPGQEDNYYPYGHDNQVDW+MDQMIPAPHVPRINGEIP IDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFR
Subjt:  PSSRNYGSENDSVEDEVETVEPSSSCSSPGQEDNYYPYGHDNQVDWKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFR

Query:  ALSDQLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQVNLTG--G
        ALSDQLFGTS+RHKLVRENVV QLKS REIYEGYVPM YDDYLEKMSMSGEWGDHVTLQAA+DWYGVKIFVMTSFKE CCIEI+PNFQKKKQV       
Subjt:  ALSDQLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQVNLTG--G

Query:  RCHFPELLGRGALQFN-LSSRSSIFTQMFPQLQMSNQMTPE
          H+  +  +G   F+  +S +  F+  F   +  ++  P+
Subjt:  RCHFPELLGRGALQFN-LSSRSSIFTQMFPQLQMSNQMTPE

A0A5A7V893 RNA polymerase sigma factor sigF5.5e-15380.06Show/hide
Query:  MNDYDSDAIRWGLRFFNGDSS----YSTEYYPDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQASNFALGWNN
        MNDYDSDAIRWGLRFFNGD +    YSTEY P  AQ DVNFYEHYYGNHCNNEVN+VENDEIIAHTLQEEFSQLEIAEASGYSN  +PS AS FALGWNN
Subjt:  MNDYDSDAIRWGLRFFNGDSS----YSTEYYPDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQASNFALGWNN

Query:  PSSRNYGSENDSVEDEVETVEPSSSCSSPGQEDNYYPYGHDNQVDWKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFR
        PSSR Y SENDSVEDEVETVEPSSSCSSPGQEDNYYPYGHDNQVDW+MDQMIPAPHVPRINGEIP IDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFR
Subjt:  PSSRNYGSENDSVEDEVETVEPSSSCSSPGQEDNYYPYGHDNQVDWKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFR

Query:  ALSDQLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQVNLTG--G
        ALSDQLFGTS+RHKLVRENVV QLKS REIYEGYVPM YDDYLEKMSMSGEWGDHVTLQAA+DWYGVKIFVMTSFKE CCIEI+PNFQKKKQV       
Subjt:  ALSDQLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQVNLTG--G

Query:  RCHFPELLGRGALQFN-LSSRSSIFTQMFPQLQMSNQMTPE
          H+  +  +G   F+  +S +  F+  F   +  ++  P+
Subjt:  RCHFPELLGRGALQFN-LSSRSSIFTQMFPQLQMSNQMTPE

A0A6J1EDW3 RNA polymerase sigma factor sigF, chloroplastic-like3.2e-15379.17Show/hide
Query:  MNDYDSDAIRWGLRFFNGDSSYSTEYYPDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQASNFALGWNNPSSR
        MNDYDSDAI WGLR FNGDSSYS+EY+PDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSN  +PSQAS + LGW+NPSSR
Subjt:  MNDYDSDAIRWGLRFFNGDSSYSTEYYPDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQASNFALGWNNPSSR

Query:  NYGSENDSVEDEVETVEPSSSCSSPGQEDNYYPYGHDNQVDWKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFRALSD
        NYGSENDS+ED VETVE SSSCSSPGQED+YYP+GHD+QVDWKMDQ+IPAPHVPRINGEIP IDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFRALSD
Subjt:  NYGSENDSVEDEVETVEPSSSCSSPGQEDNYYPYGHDNQVDWKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFRALSD

Query:  QLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQVNLTG--GRCHF
        QLFGTS RHKLVRENVV QLKS REIYEGYVPMAYDDYLEKMSM+GEWGDHVTLQAA+DWYGVKIFVMTSFKE CCIEI+P+FQKK+QV         H+
Subjt:  QLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQVNLTG--GRCHF

Query:  PELLGRGALQFNLSSRSSIFTQMFPQLQMSNQMTPE
          +  +    F+  +    F+  F   +  ++  P+
Subjt:  PELLGRGALQFNLSSRSSIFTQMFPQLQMSNQMTPE

A0A6J1IP18 RNA polymerase sigma factor sigF, chloroplastic1.9e-15379.46Show/hide
Query:  MNDYDSDAIRWGLRFFNGDSSYSTEYYPDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQASNFALGWNNPSSR
        MNDYDSDAI WGLR FNGDSSYS+EY+PDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSN  +PSQAS +ALGW+NPSSR
Subjt:  MNDYDSDAIRWGLRFFNGDSSYSTEYYPDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQASNFALGWNNPSSR

Query:  NYGSENDSVEDEVETVEPSSSCSSPGQEDNYYPYGHDNQVDWKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFRALSD
        NYGSENDS+ED VETVE SSSCSSPGQED+YYP+GHD+QVDWKMDQ+IPAPHVPRINGEIP IDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFRALSD
Subjt:  NYGSENDSVEDEVETVEPSSSCSSPGQEDNYYPYGHDNQVDWKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFRALSD

Query:  QLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQVNLTG--GRCHF
        QLFGTS RHKLVRENVV QLKS REIYEGYVPMAYDDYLEKMSM+GEWGDHVTLQAA+DWYGVKIFVMTSFKE CCIEI+P+FQKK+QV         H+
Subjt:  QLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQVNLTG--GRCHF

Query:  PELLGRGALQFNLSSRSSIFTQMFPQLQMSNQMTPE
          +  +    F+       F+  F   +  ++  P+
Subjt:  PELLGRGALQFNLSSRSSIFTQMFPQLQMSNQMTPE

SwissProt top hitse value%identityAlignment
Q0V869 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 111.1e-3643.24Show/hide
Query:  SSRNYGSENDSVEDEVETVEPSSSCSSPGQEDNYYPYGHDNQVDWKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFRA
        S     S N S    V   +   + +    ED       + ++  ++  +   PH PR+N EIP I++ T DH+ L  RL  Y   E +++GDGNCQFRA
Subjt:  SSRNYGSENDSVEDEVETVEPSSSCSSPGQEDNYYPYGHDNQVDWKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFRA

Query:  LSDQLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPN
        L+DQLF  ++ HK VR++VV QLK +R++YE YVPM Y  Y  KM   GEWGDHVTLQAA+D +  KI ++TSF++   IEI+P+
Subjt:  LSDQLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPN

Q54P70 OTU domain-containing protein DDB_G02847573.6e-1638.81Show/hide
Query:  IPPIDEVTSDHQRLLDRLKVYDFVERK-VKGDGNCQFRALSDQLFGTSERHKLVRENVV--------YQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGD
        +P   EV    QRL +RL++Y     K + GDGNCQ  ALSDQL+G     + VR+ +V        +QL +   I +      +DDY   MS +G WGD
Subjt:  IPPIDEVTSDHQRLLDRLKVYDFVERK-VKGDGNCQFRALSDQLFGTSERHKLVRENVV--------YQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGD

Query:  HVTLQAASDWYGVKIFVMTSFKEAC--CIEIIPN
        H+TL AA++ +G KI +++S +      IEIIP+
Subjt:  HVTLQAASDWYGVKIFVMTSFKEAC--CIEIIPN

Q8LBW2 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 93.2e-5742.95Show/hide
Query:  DSDAIRWGLR------FFNGDSSYSTEYYPDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQASNFALGWNNP-
        D DA+RWGL         N  S  S   Y         +    Y         +V+ND +IA   Q+E S++  AEASG  N++ P+  S  A  W +P 
Subjt:  DSDAIRWGLR------FFNGDSSYSTEYYPDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQASNFALGWNNP-

Query:  -SSRNYG-------------SENDSVEDE-VETVEPSSSCSSPGQEDNYYPYGHDNQVDW-----KMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRL
            N G             + N ++ED+ V  +      SSP ++D+        +  W     +++QMIP  HVP+INGE+P  DE  SDH+RL  RL
Subjt:  -SSRNYG-------------SENDSVEDE-VETVEPSSSCSSPGQEDNYYPYGHDNQVDW-----KMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRL

Query:  KVYDFVERKVKGDGNCQFRALSDQLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCI
        ++Y  VE K++GDGNCQFR+LSDQL+ + E H  VRE VV QL   REIYEGYVPMAY+DYL+ M  +GEWGDHVTLQAA+D +GV++FV+TSFK+ C I
Subjt:  KVYDFVERKVKGDGNCQFRALSDQLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCI

Query:  EIIPNFQKKKQV
        EI+P+FQK  ++
Subjt:  EIIPNFQKKKQV

Q9LZF7 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 103.3e-6249.45Show/hide
Query:  YYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQ-----------ASNFALGWNNPS-SRNYGSE---NDSVED-EVETVEPSSSCSS
        YY  + ++  + V+NDEIIA TLQ++F QLEIAE++ YS+  +  Q            +N    WN+ S + +Y SE   ND+ +D   +      SCSS
Subjt:  YYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQ-----------ASNFALGWNNPS-SRNYGSE---NDSVED-EVETVEPSSSCSS

Query:  PGQEDNYYPYGHDNQVD------WKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFRALSDQLFGTSERHKLVRENVVY
        P   D Y      +Q D       +++QM+P P++P+INGEIPP +E  SDH+RL +RL+++DF E KV GDGNCQFRAL+DQL+ T++RHK VR  +V 
Subjt:  PGQEDNYYPYGHDNQVD------WKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFRALSDQLFGTSERHKLVRENVVY

Query:  QLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQV
        QLKSR + Y+GYVPM + DYL KMS SGEWGDHVTLQAA+D Y VKI V+TSFK+ C IEI+P  Q+ K V
Subjt:  QLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQV

Q9SGA5 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 125.3e-4448.21Show/hide
Query:  NNPSSRNYGSENDSVEDEVETVEPSSSCSSPGQEDNYYPYGHDNQVDWKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQ
        ++ SS ++ S+ D+ +D +     S   S             D  V  ++  + P PHVPRIN  IP +++ T DHQRLL RL VY   E KV GDGNCQ
Subjt:  NNPSSRNYGSENDSVEDEVETVEPSSSCSSPGQEDNYYPYGHDNQVDWKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQ

Query:  FRALSDQLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQV
        FRALSDQL+ + E HK VR  VV QLK  R +YE YVPM Y  Y +KM   GEWGDH+TLQAA+D +  KI ++TSF++ C IEIIP +Q  K V
Subjt:  FRALSDQLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQV

Arabidopsis top hitse value%identityAlignment
AT3G02070.1 Cysteine proteinases superfamily protein3.8e-4548.21Show/hide
Query:  NNPSSRNYGSENDSVEDEVETVEPSSSCSSPGQEDNYYPYGHDNQVDWKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQ
        ++ SS ++ S+ D+ +D +     S   S             D  V  ++  + P PHVPRIN  IP +++ T DHQRLL RL VY   E KV GDGNCQ
Subjt:  NNPSSRNYGSENDSVEDEVETVEPSSSCSSPGQEDNYYPYGHDNQVDWKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQ

Query:  FRALSDQLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQV
        FRALSDQL+ + E HK VR  VV QLK  R +YE YVPM Y  Y +KM   GEWGDH+TLQAA+D +  KI ++TSF++ C IEIIP +Q  K V
Subjt:  FRALSDQLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQV

AT5G03330.1 Cysteine proteinases superfamily protein2.3e-6349.45Show/hide
Query:  YYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQ-----------ASNFALGWNNPS-SRNYGSE---NDSVED-EVETVEPSSSCSS
        YY  + ++  + V+NDEIIA TLQ++F QLEIAE++ YS+  +  Q            +N    WN+ S + +Y SE   ND+ +D   +      SCSS
Subjt:  YYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQ-----------ASNFALGWNNPS-SRNYGSE---NDSVED-EVETVEPSSSCSS

Query:  PGQEDNYYPYGHDNQVD------WKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFRALSDQLFGTSERHKLVRENVVY
        P   D Y      +Q D       +++QM+P P++P+INGEIPP +E  SDH+RL +RL+++DF E KV GDGNCQFRAL+DQL+ T++RHK VR  +V 
Subjt:  PGQEDNYYPYGHDNQVD------WKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFRALSDQLFGTSERHKLVRENVVY

Query:  QLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQV
        QLKSR + Y+GYVPM + DYL KMS SGEWGDHVTLQAA+D Y VKI V+TSFK+ C IEI+P  Q+ K V
Subjt:  QLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQV

AT5G03330.2 Cysteine proteinases superfamily protein2.3e-6349.45Show/hide
Query:  YYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQ-----------ASNFALGWNNPS-SRNYGSE---NDSVED-EVETVEPSSSCSS
        YY  + ++  + V+NDEIIA TLQ++F QLEIAE++ YS+  +  Q            +N    WN+ S + +Y SE   ND+ +D   +      SCSS
Subjt:  YYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQ-----------ASNFALGWNNPS-SRNYGSE---NDSVED-EVETVEPSSSCSS

Query:  PGQEDNYYPYGHDNQVD------WKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFRALSDQLFGTSERHKLVRENVVY
        P   D Y      +Q D       +++QM+P P++P+INGEIPP +E  SDH+RL +RL+++DF E KV GDGNCQFRAL+DQL+ T++RHK VR  +V 
Subjt:  PGQEDNYYPYGHDNQVD------WKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFRALSDQLFGTSERHKLVRENVVY

Query:  QLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQV
        QLKSR + Y+GYVPM + DYL KMS SGEWGDHVTLQAA+D Y VKI V+TSFK+ C IEI+P  Q+ K V
Subjt:  QLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQV

AT5G04250.1 Cysteine proteinases superfamily protein2.3e-5842.95Show/hide
Query:  DSDAIRWGLR------FFNGDSSYSTEYYPDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQASNFALGWNNP-
        D DA+RWGL         N  S  S   Y         +    Y         +V+ND +IA   Q+E S++  AEASG  N++ P+  S  A  W +P 
Subjt:  DSDAIRWGLR------FFNGDSSYSTEYYPDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQASNFALGWNNP-

Query:  -SSRNYG-------------SENDSVEDE-VETVEPSSSCSSPGQEDNYYPYGHDNQVDW-----KMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRL
            N G             + N ++ED+ V  +      SSP ++D+        +  W     +++QMIP  HVP+INGE+P  DE  SDH+RL  RL
Subjt:  -SSRNYG-------------SENDSVEDE-VETVEPSSSCSSPGQEDNYYPYGHDNQVDW-----KMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRL

Query:  KVYDFVERKVKGDGNCQFRALSDQLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCI
        ++Y  VE K++GDGNCQFR+LSDQL+ + E H  VRE VV QL   REIYEGYVPMAY+DYL+ M  +GEWGDHVTLQAA+D +GV++FV+TSFK+ C I
Subjt:  KVYDFVERKVKGDGNCQFRALSDQLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCI

Query:  EIIPNFQKKKQV
        EI+P+FQK  ++
Subjt:  EIIPNFQKKKQV

AT5G04250.2 Cysteine proteinases superfamily protein2.3e-5842.95Show/hide
Query:  DSDAIRWGLR------FFNGDSSYSTEYYPDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQASNFALGWNNP-
        D DA+RWGL         N  S  S   Y         +    Y         +V+ND +IA   Q+E S++  AEASG  N++ P+  S  A  W +P 
Subjt:  DSDAIRWGLR------FFNGDSSYSTEYYPDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQASNFALGWNNP-

Query:  -SSRNYG-------------SENDSVEDE-VETVEPSSSCSSPGQEDNYYPYGHDNQVDW-----KMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRL
            N G             + N ++ED+ V  +      SSP ++D+        +  W     +++QMIP  HVP+INGE+P  DE  SDH+RL  RL
Subjt:  -SSRNYG-------------SENDSVEDE-VETVEPSSSCSSPGQEDNYYPYGHDNQVDW-----KMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRL

Query:  KVYDFVERKVKGDGNCQFRALSDQLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCI
        ++Y  VE K++GDGNCQFR+LSDQL+ + E H  VRE VV QL   REIYEGYVPMAY+DYL+ M  +GEWGDHVTLQAA+D +GV++FV+TSFK+ C I
Subjt:  KVYDFVERKVKGDGNCQFRALSDQLFGTSERHKLVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCI

Query:  EIIPNFQKKKQV
        EI+P+FQK  ++
Subjt:  EIIPNFQKKKQV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGATTATGATTCCGATGCCATTAGGTGGGGTCTTCGTTTTTTCAATGGGGACTCATCGTATAGCACCGAGTACTATCCTGACATGGCACAACATGATGTC
AATTTCTATGAGCATTATTATGGAAATCACTGCAATAACGAGGTTAACCACGTGGAGAACGATGAGATAATTGCACACACTCTTCAGGAGGAGTTTTCCCAATTA
GAAATCGCAGAGGCCTCGGGCTATTCAAATGCAGTAGAGCCCTCCCAAGCATCTAATTTTGCGCTTGGTTGGAACAATCCATCCTCAAGAAACTATGGTTCAGAA
AATGATTCTGTTGAAGATGAAGTTGAAACTGTGGAGCCTTCTAGTTCGTGTTCTAGTCCAGGTCAAGAGGATAATTACTATCCATACGGGCATGACAATCAAGTA
GATTGGAAAATGGATCAAATGATTCCAGCACCTCATGTCCCAAGAATCAATGGTGAGATTCCTCCAATTGATGAAGTAACTTCAGATCATCAAAGGTTGCTGGAT
AGGTTGAAGGTATATGATTTTGTTGAACGCAAGGTTAAAGGGGATGGTAATTGTCAGTTCCGTGCTCTATCAGATCAACTATTTGGAACGTCTGAACGCCACAAG
TTGGTGAGAGAAAATGTTGTGTATCAGCTCAAGTCACGTCGGGAGATTTATGAGGGATATGTTCCCATGGCATATGATGATTATTTGGAAAAGATGTCCATGAGT
GGTGAGTGGGGTGATCATGTAACACTACAGGCAGCTTCAGATTGGTATGGCGTTAAAATATTTGTCATGACTTCTTTTAAGGAAGCCTGTTGTATAGAGATTATC
CCTAATTTCCAGAAGAAAAAACAAGTAAATTTGACTGGAGGAAGATGTCATTTTCCTGAGCTTTTGGGCAGAGGTGCATTACAATTCAATCTATCCTCAAGGAGC
TCCATATTCACCCAGATGTTTCCTCAGTTGCAGATGAGCAATCAAATGACTCCAGAAAGAGGAGGAGATGGTGGATTTTCGGAAACAAGCATTAAGACTCCAGGC
AAGAGGTGCAATAAGTCTTTAACCTCTCCTGCATTTTCCCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACGATTATGATTCCGATGCCATTAGGTGGGGTCTTCGTTTTTTCAATGGGGACTCATCGTATAGCACCGAGTACTATCCTGACATGGCACAACATGATGTC
AATTTCTATGAGCATTATTATGGAAATCACTGCAATAACGAGGTTAACCACGTGGAGAACGATGAGATAATTGCACACACTCTTCAGGAGGAGTTTTCCCAATTA
GAAATCGCAGAGGCCTCGGGCTATTCAAATGCAGTAGAGCCCTCCCAAGCATCTAATTTTGCGCTTGGTTGGAACAATCCATCCTCAAGAAACTATGGTTCAGAA
AATGATTCTGTTGAAGATGAAGTTGAAACTGTGGAGCCTTCTAGTTCGTGTTCTAGTCCAGGTCAAGAGGATAATTACTATCCATACGGGCATGACAATCAAGTA
GATTGGAAAATGGATCAAATGATTCCAGCACCTCATGTCCCAAGAATCAATGGTGAGATTCCTCCAATTGATGAAGTAACTTCAGATCATCAAAGGTTGCTGGAT
AGGTTGAAGGTATATGATTTTGTTGAACGCAAGGTTAAAGGGGATGGTAATTGTCAGTTCCGTGCTCTATCAGATCAACTATTTGGAACGTCTGAACGCCACAAG
TTGGTGAGAGAAAATGTTGTGTATCAGCTCAAGTCACGTCGGGAGATTTATGAGGGATATGTTCCCATGGCATATGATGATTATTTGGAAAAGATGTCCATGAGT
GGTGAGTGGGGTGATCATGTAACACTACAGGCAGCTTCAGATTGGTATGGCGTTAAAATATTTGTCATGACTTCTTTTAAGGAAGCCTGTTGTATAGAGATTATC
CCTAATTTCCAGAAGAAAAAACAAGTAAATTTGACTGGAGGAAGATGTCATTTTCCTGAGCTTTTGGGCAGAGGTGCATTACAATTCAATCTATCCTCAAGGAGC
TCCATATTCACCCAGATGTTTCCTCAGTTGCAGATGAGCAATCAAATGACTCCAGAAAGAGGAGGAGATGGTGGATTTTCGGAAACAAGCATTAAGACTCCAGGC
AAGAGGTGCAATAAGTCTTTAACCTCTCCTGCATTTTCCCCTTAG
Protein sequenceShow/hide protein sequence
MNDYDSDAIRWGLRFFNGDSSYSTEYYPDMAQHDVNFYEHYYGNHCNNEVNHVENDEIIAHTLQEEFSQLEIAEASGYSNAVEPSQASNFALGWNNPSSRNYGSE
NDSVEDEVETVEPSSSCSSPGQEDNYYPYGHDNQVDWKMDQMIPAPHVPRINGEIPPIDEVTSDHQRLLDRLKVYDFVERKVKGDGNCQFRALSDQLFGTSERHK
LVRENVVYQLKSRREIYEGYVPMAYDDYLEKMSMSGEWGDHVTLQAASDWYGVKIFVMTSFKEACCIEIIPNFQKKKQVNLTGGRCHFPELLGRGALQFNLSSRS
SIFTQMFPQLQMSNQMTPERGGDGGFSETSIKTPGKRCNKSLTSPAFSP