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Lag0012678 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012678
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase zinc-binding domain
Genome locationchr1:43322668..43325141
RNA-Seq ExpressionLag0012678
SyntenyLag0012678
Gene Ontology termsGO:0009987 - cellular process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066908.1 mitochondrial phosphate carrier protein 3 [Cucumis melo var. makuwa]5.0e-0947.76Show/hide
Query:  LFASSLWNRFYRTFGVALAQGKDRGSMIEVVLLNSPFHDKGKILWLACFFATLWNIWLERNRRIFRG
        LFA  +W+ F++ FG + A  +   +MIE  LL+SPF DKG  LWLA   A +W+IW +RN R+ RG
Subjt:  LFASSLWNRFYRTFGVALAQGKDRGSMIEVVLLNSPFHDKGKILWLACFFATLWNIWLERNRRIFRG

KAG9449628.1 hypothetical protein H6P81_009593 [Aristolochia fimbriata]2.5e-0841.77Show/hide
Query:  ETLNHLLGDCLFASSLWNRFYRTFGVALAQGKDRGSMIEVVLLNSPFHDKGKILWLACFFATLWNIWLERNRRIFRGIE
        ET NHLL  C FA ++W+   + FG++    KD  S+++   +  P    G ILW A   A  WN+WLERN +IF G E
Subjt:  ETLNHLLGDCLFASSLWNRFYRTFGVALAQGKDRGSMIEVVLLNSPFHDKGKILWLACFFATLWNIWLERNRRIFRGIE

OVA20230.1 Reverse transcriptase zinc-binding domain [Macleaya cordata]1.2e-0739.76Show/hide
Query:  RNKEETLNHLLGDCLFASSLWNRFYRTFGVALAQGKDRGSMIEVVLLNSPFHDKGKILWLACFFATLWNIWLERNRRIFRGIE
        R   E++NHL+  C  AS +WN F+  FGV  A  KD   + +   LN  F  +G  LW    +A  W +W ERN+RIF   E
Subjt:  RNKEETLNHLLGDCLFASSLWNRFYRTFGVALAQGKDRGSMIEVVLLNSPFHDKGKILWLACFFATLWNIWLERNRRIFRGIE

XP_016900613.1 PREDICTED: uncharacterized protein LOC107990976 [Cucumis melo]1.5e-1344.83Show/hide
Query:  TYYLRNKEETLNHLLGDCLFASSLWNRFYRTFGVALAQGKDRGSMIEVVLLNSPFHDKGKILWLACFFATLWNIWLERNRRIFRGIE
        ++ L +  E L+HLLG    AS +W+ F +TFG+  A+ +D   MIE  LLN P  ++G+ LW AC  A LW +W E NRR+F G+E
Subjt:  TYYLRNKEETLNHLLGDCLFASSLWNRFYRTFGVALAQGKDRGSMIEVVLLNSPFHDKGKILWLACFFATLWNIWLERNRRIFRGIE

XP_022151711.1 uncharacterized protein LOC111019624 [Momordica charantia]1.4e-0845.83Show/hide
Query:  SSLWN----RFYRTFGVALAQGKDRGSMIEVVLLNSPFHDKGKILWLACFFATLWNIWLERNRRIFRGIESS
        +SLW     +  + FG    QG D GS++       PF ++G+ LW ACF A+LW IWLERN R+FRG+E S
Subjt:  SSLWN----RFYRTFGVALAQGKDRGSMIEVVLLNSPFHDKGKILWLACFFATLWNIWLERNRRIFRGIESS

TrEMBL top hitse value%identityAlignment
A0A1S4DXB1 uncharacterized protein LOC1079909767.2e-1444.83Show/hide
Query:  TYYLRNKEETLNHLLGDCLFASSLWNRFYRTFGVALAQGKDRGSMIEVVLLNSPFHDKGKILWLACFFATLWNIWLERNRRIFRGIE
        ++ L +  E L+HLLG    AS +W+ F +TFG+  A+ +D   MIE  LLN P  ++G+ LW AC  A LW +W E NRR+F G+E
Subjt:  TYYLRNKEETLNHLLGDCLFASSLWNRFYRTFGVALAQGKDRGSMIEVVLLNSPFHDKGKILWLACFFATLWNIWLERNRRIFRGIE

A0A200QJ46 Reverse transcriptase zinc-binding domain5.9e-0839.76Show/hide
Query:  RNKEETLNHLLGDCLFASSLWNRFYRTFGVALAQGKDRGSMIEVVLLNSPFHDKGKILWLACFFATLWNIWLERNRRIFRGIE
        R   E++NHL+  C  AS +WN F+  FGV  A  KD   + +   LN  F  +G  LW    +A  W +W ERN+RIF   E
Subjt:  RNKEETLNHLLGDCLFASSLWNRFYRTFGVALAQGKDRGSMIEVVLLNSPFHDKGKILWLACFFATLWNIWLERNRRIFRGIE

A0A200RBZ1 Reverse transcriptase zinc-binding domain5.9e-0839.76Show/hide
Query:  RNKEETLNHLLGDCLFASSLWNRFYRTFGVALAQGKDRGSMIEVVLLNSPFHDKGKILWLACFFATLWNIWLERNRRIFRGIE
        R   E++NHL+  C  AS +WN F+  FGV  A  KD   + +   LN  F  +G  LW    +A  W +W ERN+RIF   E
Subjt:  RNKEETLNHLLGDCLFASSLWNRFYRTFGVALAQGKDRGSMIEVVLLNSPFHDKGKILWLACFFATLWNIWLERNRRIFRGIE

A0A5A7VGR5 Mitochondrial phosphate carrier protein 32.4e-0947.76Show/hide
Query:  LFASSLWNRFYRTFGVALAQGKDRGSMIEVVLLNSPFHDKGKILWLACFFATLWNIWLERNRRIFRG
        LFA  +W+ F++ FG + A  +   +MIE  LL+SPF DKG  LWLA   A +W+IW +RN R+ RG
Subjt:  LFASSLWNRFYRTFGVALAQGKDRGSMIEVVLLNSPFHDKGKILWLACFFATLWNIWLERNRRIFRG

A0A6J1DFI2 uncharacterized protein LOC1110196247.0e-0945.83Show/hide
Query:  SSLWN----RFYRTFGVALAQGKDRGSMIEVVLLNSPFHDKGKILWLACFFATLWNIWLERNRRIFRGIESS
        +SLW     +  + FG    QG D GS++       PF ++G+ LW ACF A+LW IWLERN R+FRG+E S
Subjt:  SSLWN----RFYRTFGVALAQGKDRGSMIEVVLLNSPFHDKGKILWLACFFATLWNIWLERNRRIFRGIESS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGGAGGTCGCCCAAGCTCATTTGTCCCTCTAAAATCTAGCATAGAGAGTGTGTTGATATCTACTTACTATTTGAGGAATAAGGAGGAGACTCTAAACCATTTGCT
TGGAGATTGCTTGTTCGCATCCTCTCTTTGGAATCGTTTCTACCGGACTTTTGGAGTGGCCTTGGCTCAAGGCAAGGATCGTGGGTCCATGATTGAGGTAGTTCTCCTTA
ACTCTCCTTTTCATGATAAAGGAAAGATTTTATGGCTGGCTTGCTTCTTTGCTACTTTGTGGAACATTTGGCTTGAAAGAAATAGGCGTATTTTTAGAGGGATCGAGAGT
TCGGGGAGGAGATTTGGGAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGGAGGTCGCCCAAGCTCATTTGTCCCTCTAAAATCTAGCATAGAGAGTGTGTTGATATCTACTTACTATTTGAGGAATAAGGAGGAGACTCTAAACCATTTGCT
TGGAGATTGCTTGTTCGCATCCTCTCTTTGGAATCGTTTCTACCGGACTTTTGGAGTGGCCTTGGCTCAAGGCAAGGATCGTGGGTCCATGATTGAGGTAGTTCTCCTTA
ACTCTCCTTTTCATGATAAAGGAAAGATTTTATGGCTGGCTTGCTTCTTTGCTACTTTGTGGAACATTTGGCTTGAAAGAAATAGGCGTATTTTTAGAGGGATCGAGAGT
TCGGGGAGGAGATTTGGGAGTTGA
Protein sequenceShow/hide protein sequence
MQGGRPSSFVPLKSSIESVLISTYYLRNKEETLNHLLGDCLFASSLWNRFYRTFGVALAQGKDRGSMIEVVLLNSPFHDKGKILWLACFFATLWNIWLERNRRIFRGIES
SGRRFGS