| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0037436.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 3.5e-89 | 32.58 | Show/hide |
Query: MVSNLNWCPISGSEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIDIKPSVMEVFYDFYQKDIINCNVNETYITLIPKKNTALQIQDFRS
++ NLNW PI S +L F E E+ + L + NK+PGPDG+T+EF KK W +K V++VF DF++K IIN NVN TYI LI KK+ +D+RS
Subjt: MVSNLNWCPISGSEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIDIKPSVMEVFYDFYQKDIINCNVNETYITLIPKKNTALQIQDFRS
Query: ISLTTVLYRLIAKTLAERLKSTLQGTVSENQLAFVKGRQITDAILVANEVVDFWKCSHTRGFVIKLDIEKAFDKICWNFIDKILAFKGYPITWH------
ISL T LY++IAK +A RLKSTL ++S NQLAFVKGRQIT AIL+ANE VDFW S T+G+V+KLDIEKAFDK+ W+FID +L K YP+ W
Subjt: ISLTTVLYRLIAKTLAERLKSTLQGTVSENQLAFVKGRQITDAILVANEVVDFWKCSHTRGFVIKLDIEKAFDKICWNFIDKILAFKGYPITWH------
Query: -------------------------------------------------------------------------DILLFVQDNDAMLGNLFNIIKVFELSS
DIL+F++D++ + +L N I +FE +S
Subjt: -------------------------------------------------------------------------DILLFVQDNDAMLGNLFNIIKVFELSS
Query: GLNINFSKSSITGINVEDVRVAQIAANWGCPMAQFPIPYLGSPLGIRLSDLFFG---MGKIKVVASLW----LIGAWWLRLLRLGVWAYSRLELQIAHFK
GL IN SKSSI+ +N+ R A++A W P P YL PLG + + F M KI+ S W + L L++ + + +L I FK
Subjt: GLNINFSKSSITGINVEDVRVAQIAANWGCPMAQFPIPYLGSPLGIRLSDLFFG---MGKIKVVASLW----LIGAWWLRLLRLGVWAYSRLELQIAHFK
Query: S-NGFG----------------------------DSFMRRLL----------------------CGSESSQQNIQPIDKEL-------FQLRRDSL----
+ +G G + R L C N++ I+ L FQ +DSL
Subjt: S-NGFG----------------------------DSFMRRLL----------------------CGSESSQQNIQPIDKEL-------FQLRRDSL----
Query: -------------PP--------RAPWTSILKQASLFLANTVWNLKDGSKISFWHDSWTDHGPLYQAIPRLFALSSRKNMTVSDAWDHTTSSWKLYPRRP
PP +APW I+K+ F ++ W +KDG +SFWH +W G L PRL+ LS +N T+ + WD T+ W L+PRRP
Subjt: -------------PP--------RAPWTSILKQASLFLANTVWNLKDGSKISFWHDSWTDHGPLYQAIPRLFALSSRKNMTVSDAWDHTTSSWKLYPRRP
Query: LFEREALVQAECASSFPTPALTGGADHMLWNPDSKGRFSVASARHFYCNLSSPDRPQPH---SIIFSNLWKALIPKKDQILYLDSYLQKIK-----YNRQ
L +RE + L GG ++M+W P+ KG ++ ASA+ + +RP P+ + LWK+ +PKK + + + I R
Subjt: LFEREALVQAECASSFPTPALTGGADHMLWNPDSKGRFSVASARHFYCNLSSPDRPQPH---SIIFSNLWKALIPKKDQILYLDSYLQKIK-----YNRQ
Query: ASTYFQ
+TY Q
Subjt: ASTYFQ
|
|
| KAA0039770.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 3.2e-90 | 34.67 | Show/hide |
Query: MVSNLNWCPISGSEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIDIKPSVMEVFYDFYQKDIINCNVNETYITLIPKKNTALQIQDFRS
++ NLNW PIS ++A +L F+E E+ + L A +NKSPGPDGFT+EF+K +W +K ++ +F DF+ IIN VN T I LI KK + D+R
Subjt: MVSNLNWCPISGSEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIDIKPSVMEVFYDFYQKDIINCNVNETYITLIPKKNTALQIQDFRS
Query: ISLTTVLYRLIAKTLAERLKSTLQGTVSENQLAFVKGRQITDAILVANEVVDFWKCSHTRGFVIKLDIEKAFDKICWNFIDKILAFKGYPITWH------
ISLTT +Y+LIAK +AERLK TL TV+ENQ+AFVKGRQI DAILVANE +D+W+ +GFVIKLDIEKAFDK+ W FID +L KGYP W
Subjt: ISLTTVLYRLIAKTLAERLKSTLQGTVSENQLAFVKGRQITDAILVANEVVDFWKCSHTRGFVIKLDIEKAFDKICWNFIDKILAFKGYPITWH------
Query: -----------------------------------------------------------------------DILLFVQDNDAMLGNLFNIIKVFELSSGL
DILLFV+D++ + NL NII +F+L+SGL
Subjt: -----------------------------------------------------------------------DILLFVQDNDAMLGNLFNIIKVFELSSGL
Query: NINFSKSSITGINVEDVRVAQIAANWGCPMAQFPIPYLGSPLG-----------------IRLSDLFFGM----GKIKVV-ASLWLIGAWWLRLLRLGVW
+IN +KS+I+ INV+ R QIA+ WG PI YLG PLG +L+ + M GKI ++ +SL + + L + + V
Subjt: NINFSKSSITGINVEDVRVAQIAANWGCPMAQFPIPYLGSPLG-----------------IRLSDLFFGM----GKIKVV-ASLWLIGAWWLRLLRLGVW
Query: AYSRLE---------------------------------LQIAHFKSNGFG--DSFMRRLLCGSESSQQNIQPIDKELFQLRRDSLP-------PRAPWT
+E L I+ K F ++ R + E S + I+ + L + +P R+PW
Subjt: AYSRLE---------------------------------LQIAHFKSNGFG--DSFMRRLLCGSESSQQNIQPIDKELFQLRRDSLP-------PRAPWT
Query: SILKQASLFLANTVWNLKDGSKISFWHDSWTDHGPLYQAIPRLFALSSRKNMTVSDAWDHTTSSWKLYPRRPLFEREALVQAECASSFPTPALTGGADHM
SI K F + W +K+G SFWH W + PL PRL+ALS+ K ++ D W++T W L PRR L E E + AE +S G D
Subjt: SILKQASLFLANTVWNLKDGSKISFWHDSWTDHGPLYQAIPRLFALSSRKNMTVSDAWDHTTSSWKLYPRRPLFEREALVQAECASSFPTPALTGGADHM
Query: LWNPDSKGRFSVASARHFYCNLSSPDR---PQPHSIIFSNLWKALIPKK
+W +S G ++VAS + L P++ F NLWK IPKK
Subjt: LWNPDSKGRFSVASARHFYCNLSSPDR---PQPHSIIFSNLWKALIPKK
|
|
| KAA0046762.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 1.9e-90 | 33.33 | Show/hide |
Query: VSNLNWCPISGSEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIDIKPSVMEVFYDFYQKDIINCNVNETYITLIPKKNTALQIQDFRSI
+ NL W PI SE +L PF E E+ + ++ K+PGPDGF + FFK W +K +M++F DFY K +IN N+N TYI LIPKK +DFR I
Subjt: VSNLNWCPISGSEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIDIKPSVMEVFYDFYQKDIINCNVNETYITLIPKKNTALQIQDFRSI
Query: SLTTVLYRLIAKTLAERLKSTLQGTVSENQLAFVKGRQITDAILVANEVVDFWKCSHTRGFVIKLDIEKAFDKICWNFIDKILAFKGYPITWH-------
SLTT +Y++IAKTL+ RLK++L T+SENQLAFVK RQITDAIL+ANE VDFWK +GF++KLDIEKAFD + W+FID +L K +PI W
Subjt: SLTTVLYRLIAKTLAERLKSTLQGTVSENQLAFVKGRQITDAILVANEVVDFWKCSHTRGFVIKLDIEKAFDKICWNFIDKILAFKGYPITWH-------
Query: ------------------------------------------------------------------------DILLFVQDNDAMLGNLFNIIKVFELSSG
DILLF++DND L NL + +FE +SG
Subjt: ------------------------------------------------------------------------DILLFVQDNDAMLGNLFNIIKVFELSSG
Query: LNINFSKSSITGINVEDVRVAQIAANWGCPMAQFPIPYLGSPLGIR-LSDLFFGMGKIKVVASL--W----LIGAWWLRLLRLGVWAYSRLELQIAHFKS
L IN KS++ +NV ++R + A+ WG P+ YLG PLG S LF+ + K+ L W + L L++ + + +L + S
Subjt: LNINFSKSSITGINVEDVRVAQIAANWGCPMAQFPIPYLGSPLGIR-LSDLFFGMGKIKVVASL--W----LIGAWWLRLLRLGVWAYSRLELQIAHFKS
Query: NGFG--DSFMRRLLCGSESSQQNIQPID-----------------------------------------KELFQLRRDSLPP------------RAPWTS
+ F R L +S + I+ + L Q + + P +APW S
Subjt: NGFG--DSFMRRLLCGSESSQQNIQPID-----------------------------------------KELFQLRRDSLPP------------RAPWTS
Query: ILKQASLFLANTVWNLKDGSKISFWHDSWTDHGPLYQAIPRLFALSSRKNMTVSDAWDHTTSSWKLYPRRPLFEREALVQAECASSFPTPALTGGADHML
I+ F +N W+L +G +ISFW+ +W+ G L A PRLFALS K++TV DAW+ + W + RR L +RE A+ P P G+
Subjt: ILKQASLFLANTVWNLKDGSKISFWHDSWTDHGPLYQAIPRLFALSSRKNMTVSDAWDHTTSSWKLYPRRPLFEREALVQAECASSFPTPALTGGADHML
Query: WNPDSKGRFSVASARHFYCNLSSPDRPQPHSIIFSNLWKALIPKK
W PDSK FS+ASA+ P S + +WK+ IP K
Subjt: WNPDSKGRFSVASARHFYCNLSSPDRPQPHSIIFSNLWKALIPKK
|
|
| TYK00226.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 4.4e-92 | 33.77 | Show/hide |
Query: MVSNLNWCPISGSEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIDIKPSVMEVFYDFYQKDIINCNVNETYITLIPKKNTALQIQDFRS
++ NLNW PI S +L F E E+ + L + NK+PGPDG+T+EF KK W +K V++VF DF++K IIN NVN TYI LI KK+ +D+RS
Subjt: MVSNLNWCPISGSEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIDIKPSVMEVFYDFYQKDIINCNVNETYITLIPKKNTALQIQDFRS
Query: ISLTTVLYRLIAKTLAERLKSTLQGTVSENQLAFVKGRQITDAILVANEVVDFWKCSHTRGFVIKLDIEKAFDKICWNFIDKILAFKGYPITWH------
ISL T LY++IAK +A RLKSTL ++S NQLAFVKGRQIT AIL+ANE VDFW S T+G+V+KLDIEKAFDK+ W+FID +L K YP+ W
Subjt: ISLTTVLYRLIAKTLAERLKSTLQGTVSENQLAFVKGRQITDAILVANEVVDFWKCSHTRGFVIKLDIEKAFDKICWNFIDKILAFKGYPITWH------
Query: -------------------------------------------------------------------------DILLFVQDNDAMLGNLFNIIKVFELSS
DIL+F++D++ + +L N I +FE +S
Subjt: -------------------------------------------------------------------------DILLFVQDNDAMLGNLFNIIKVFELSS
Query: GLNINFSKSSITGINVEDVRVAQIAANWGCPMAQFPIPYLGSPLGIRLSDLFFG---MGKIKVVASLW----LIGAWWLRLLRLGVWAYSRLELQIAHFK
GL IN SKSSI+ +N+ R A++A W P P YL PLG + + F M KI+ S W + L L++ + + +L I FK
Subjt: GLNINFSKSSITGINVEDVRVAQIAANWGCPMAQFPIPYLGSPLGIRLSDLFFG---MGKIKVVASLW----LIGAWWLRLLRLGVWAYSRLELQIAHFK
Query: S-NGFG---DSFMRRLL----------------------CGSESSQQNIQPIDKEL-------FQLRRDSL-----------------PP--------RA
+ +G G + R L C N++ I+ L FQ +DSL PP +A
Subjt: S-NGFG---DSFMRRLL----------------------CGSESSQQNIQPIDKEL-------FQLRRDSL-----------------PP--------RA
Query: PWTSILKQASLFLANTVWNLKDGSKISFWHDSWTDHGPLYQAIPRLFALSSRKNMTVSDAWDHTTSSWKLYPRRPLFEREALVQAECASSFPTPALTGGA
PW I+K+ F ++ W +KDG +SFWH +W G L PRL+ LS +N T+ + WD T+ W L+PRRPL +RE + L GG
Subjt: PWTSILKQASLFLANTVWNLKDGSKISFWHDSWTDHGPLYQAIPRLFALSSRKNMTVSDAWDHTTSSWKLYPRRPLFEREALVQAECASSFPTPALTGGA
Query: DHMLWNPDSKGRFSVASARHFYCNLSSPDRPQPH---SIIFSNLWKALIPKKDQILYLDSYLQKIK-----YNRQASTYFQ
++M+W P+ KG ++ ASA+ + +RP P+ + LWK+ +PKK + + + I R +TY Q
Subjt: DHMLWNPDSKGRFSVASARHFYCNLSSPDRPQPH---SIIFSNLWKALIPKKDQILYLDSYLQKIK-----YNRQASTYFQ
|
|
| XP_016902461.1 PREDICTED: LINE-1 retrotransposable element ORF2 protein [Cucumis melo] | 1.9e-90 | 34.67 | Show/hide |
Query: MVSNLNWCPISGSEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIDIKPSVMEVFYDFYQKDIINCNVNETYITLIPKKNTALQIQDFRS
++ NLNW PIS ++A +L F+E E+ + L A +NKSPGPDGFT+EF+K +W +K ++ +F DF+ IIN VN T I LI KK + D+R
Subjt: MVSNLNWCPISGSEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIDIKPSVMEVFYDFYQKDIINCNVNETYITLIPKKNTALQIQDFRS
Query: ISLTTVLYRLIAKTLAERLKSTLQGTVSENQLAFVKGRQITDAILVANEVVDFWKCSHTRGFVIKLDIEKAFDKICWNFIDKILAFKGYPITWH------
ISLTT +Y+LIAK +AERLK TL TV+ENQ+AFVKGRQI DAILVANE +D+W+ +GFVIKLDIEKAFDK+ W FID +L KGYP W
Subjt: ISLTTVLYRLIAKTLAERLKSTLQGTVSENQLAFVKGRQITDAILVANEVVDFWKCSHTRGFVIKLDIEKAFDKICWNFIDKILAFKGYPITWH------
Query: -----------------------------------------------------------------------DILLFVQDNDAMLGNLFNIIKVFELSSGL
DILLFV+D++ + NL NII +F+L+SGL
Subjt: -----------------------------------------------------------------------DILLFVQDNDAMLGNLFNIIKVFELSSGL
Query: NINFSKSSITGINVEDVRVAQIAANWGCPMAQFPIPYLGSPLG-----------------IRLSDLFFGM----GKIKVV-ASLWLIGAWWLRLLRLGVW
+IN +KS+I+ INV+ R QIA+ WG PI YLG PLG +L+ + M GKI ++ +SL + + L + ++ V
Subjt: NINFSKSSITGINVEDVRVAQIAANWGCPMAQFPIPYLGSPLG-----------------IRLSDLFFGM----GKIKVV-ASLWLIGAWWLRLLRLGVW
Query: AYSRLE---------------------------------LQIAHFKSNGFG--DSFMRRLLCGSESSQQNIQPIDKELFQLRRDSLP-------PRAPWT
+E L I+ K F ++ R + E S + I+ + L + +P R+PW
Subjt: AYSRLE---------------------------------LQIAHFKSNGFG--DSFMRRLLCGSESSQQNIQPIDKELFQLRRDSLP-------PRAPWT
Query: SILKQASLFLANTVWNLKDGSKISFWHDSWTDHGPLYQAIPRLFALSSRKNMTVSDAWDHTTSSWKLYPRRPLFEREALVQAECASSFPTPALTGGADHM
SI K F + W +K+G SFWH W + PL PRL+ALS+ K ++ D W++T W L PRR L E E + AE +S G D
Subjt: SILKQASLFLANTVWNLKDGSKISFWHDSWTDHGPLYQAIPRLFALSSRKNMTVSDAWDHTTSSWKLYPRRPLFEREALVQAECASSFPTPALTGGADHM
Query: LWNPDSKGRFSVASARHFYCNLSSPDR---PQPHSIIFSNLWKALIPKK
+W +S G ++VAS + L P++ F NLWK IPKK
Subjt: LWNPDSKGRFSVASARHFYCNLSSPDR---PQPHSIIFSNLWKALIPKK
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S4E2K5 LINE-1 retrotransposable element ORF2 protein | 9.0e-91 | 34.67 | Show/hide |
Query: MVSNLNWCPISGSEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIDIKPSVMEVFYDFYQKDIINCNVNETYITLIPKKNTALQIQDFRS
++ NLNW PIS ++A +L F+E E+ + L A +NKSPGPDGFT+EF+K +W +K ++ +F DF+ IIN VN T I LI KK + D+R
Subjt: MVSNLNWCPISGSEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIDIKPSVMEVFYDFYQKDIINCNVNETYITLIPKKNTALQIQDFRS
Query: ISLTTVLYRLIAKTLAERLKSTLQGTVSENQLAFVKGRQITDAILVANEVVDFWKCSHTRGFVIKLDIEKAFDKICWNFIDKILAFKGYPITWH------
ISLTT +Y+LIAK +AERLK TL TV+ENQ+AFVKGRQI DAILVANE +D+W+ +GFVIKLDIEKAFDK+ W FID +L KGYP W
Subjt: ISLTTVLYRLIAKTLAERLKSTLQGTVSENQLAFVKGRQITDAILVANEVVDFWKCSHTRGFVIKLDIEKAFDKICWNFIDKILAFKGYPITWH------
Query: -----------------------------------------------------------------------DILLFVQDNDAMLGNLFNIIKVFELSSGL
DILLFV+D++ + NL NII +F+L+SGL
Subjt: -----------------------------------------------------------------------DILLFVQDNDAMLGNLFNIIKVFELSSGL
Query: NINFSKSSITGINVEDVRVAQIAANWGCPMAQFPIPYLGSPLG-----------------IRLSDLFFGM----GKIKVV-ASLWLIGAWWLRLLRLGVW
+IN +KS+I+ INV+ R QIA+ WG PI YLG PLG +L+ + M GKI ++ +SL + + L + ++ V
Subjt: NINFSKSSITGINVEDVRVAQIAANWGCPMAQFPIPYLGSPLG-----------------IRLSDLFFGM----GKIKVV-ASLWLIGAWWLRLLRLGVW
Query: AYSRLE---------------------------------LQIAHFKSNGFG--DSFMRRLLCGSESSQQNIQPIDKELFQLRRDSLP-------PRAPWT
+E L I+ K F ++ R + E S + I+ + L + +P R+PW
Subjt: AYSRLE---------------------------------LQIAHFKSNGFG--DSFMRRLLCGSESSQQNIQPIDKELFQLRRDSLP-------PRAPWT
Query: SILKQASLFLANTVWNLKDGSKISFWHDSWTDHGPLYQAIPRLFALSSRKNMTVSDAWDHTTSSWKLYPRRPLFEREALVQAECASSFPTPALTGGADHM
SI K F + W +K+G SFWH W + PL PRL+ALS+ K ++ D W++T W L PRR L E E + AE +S G D
Subjt: SILKQASLFLANTVWNLKDGSKISFWHDSWTDHGPLYQAIPRLFALSSRKNMTVSDAWDHTTSSWKLYPRRPLFEREALVQAECASSFPTPALTGGADHM
Query: LWNPDSKGRFSVASARHFYCNLSSPDR---PQPHSIIFSNLWKALIPKK
+W +S G ++VAS + L P++ F NLWK IPKK
Subjt: LWNPDSKGRFSVASARHFYCNLSSPDR---PQPHSIIFSNLWKALIPKK
|
|
| A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein | 1.7e-89 | 34.37 | Show/hide |
Query: VSNLNWCPISGSEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIDIKPSVMEVFYDFYQKDIINCNVNETYITLIPKKNTALQIQDFRSI
+ NL+WCPIS + L +PF+E E++ LK+ NK+PGPDG+ ++F +KSW +K ++ ++F DF+ IIN VNET ITLI KK DFR I
Subjt: VSNLNWCPISGSEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIDIKPSVMEVFYDFYQKDIINCNVNETYITLIPKKNTALQIQDFRSI
Query: SLTTVLYRLIAKTLAERLKSTLQGTVSENQLAFVKGRQITDAILVANEVVDFWKCSHTRGFVIKLDIEKAFDKICWNFIDKILAFKGYPITWH-------
SLTT +Y+LIAKTLA+RLK TL T+SE+Q+AFVKGRQIT+AIL+ANE +DFW+ RGFVIKLDIEKAFDK+ W FID +L K Y W
Subjt: SLTTVLYRLIAKTLAERLKSTLQGTVSENQLAFVKGRQITDAILVANEVVDFWKCSHTRGFVIKLDIEKAFDKICWNFIDKILAFKGYPITWH-------
Query: ------------------------------------------------------------------------DILLFVQDNDAMLGNLFNIIKVFELSSG
DIL+FV+D D + NL I+ +FE +SG
Subjt: ------------------------------------------------------------------------DILLFVQDNDAMLGNLFNIIKVFELSSG
Query: LNINFSKSSITGINVEDVRVAQIAANWGCPMAQFPIPYLGSPLGIRLSDLFFG---MGKIKVVASLW------------LIGA-------WWLRLLRLGV
LNIN SKS+I INV R IA +WG P YLG PLG R S F + KI+ S W LI + + + + ++
Subjt: LNINFSKSSITGINVEDVRVAQIAANWGCPMAQFPIPYLGSPLGIRLSDLFFG---MGKIKVVASLW------------LIGA-------WWLRLLRLGV
Query: WAYSRLELQIAHF----KSNGFGDSFMR--RLLCGSESSQQNIQPIDKELFQL----------RRDSLPPR------------------------APWTS
++E +F SNG S +R +++ E I ++ F L +D L R +PW +
Subjt: WAYSRLELQIAHF----KSNGFGDSFMR--RLLCGSESSQQNIQPIDKELFQL----------RRDSLPPR------------------------APWTS
Query: ILKQASLFLANTVWNLKDGSKISFWHDSWTDHGPLYQAIPRLFALSSRKNMTVSDAWDHTTSSWKLYPRRPLFEREALVQAECASSFPTPALTGGADHML
+ + S F N W + DG ISFW D+W + PL A+PRLFALS+ K +V + W+ +++ W L+ RPL + E + +S PTP G L
Subjt: ILKQASLFLANTVWNLKDGSKISFWHDSWTDHGPLYQAIPRLFALSSRKNMTVSDAWDHTTSSWKLYPRRPLFEREALVQAECASSFPTPALTGGADHML
Query: WNPDSKGRFSVASARHFYCNLSSPDRPQP-HSIIFSNLWKALIPKK
WN +S F AS + +P P H ++ LWK PKK
Subjt: WNPDSKGRFSVASARHFYCNLSSPDRPQP-HSIIFSNLWKALIPKK
|
|
| A0A5A7TTK1 LINE-1 retrotransposable element ORF2 protein | 9.0e-91 | 33.33 | Show/hide |
Query: VSNLNWCPISGSEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIDIKPSVMEVFYDFYQKDIINCNVNETYITLIPKKNTALQIQDFRSI
+ NL W PI SE +L PF E E+ + ++ K+PGPDGF + FFK W +K +M++F DFY K +IN N+N TYI LIPKK +DFR I
Subjt: VSNLNWCPISGSEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIDIKPSVMEVFYDFYQKDIINCNVNETYITLIPKKNTALQIQDFRSI
Query: SLTTVLYRLIAKTLAERLKSTLQGTVSENQLAFVKGRQITDAILVANEVVDFWKCSHTRGFVIKLDIEKAFDKICWNFIDKILAFKGYPITWH-------
SLTT +Y++IAKTL+ RLK++L T+SENQLAFVK RQITDAIL+ANE VDFWK +GF++KLDIEKAFD + W+FID +L K +PI W
Subjt: SLTTVLYRLIAKTLAERLKSTLQGTVSENQLAFVKGRQITDAILVANEVVDFWKCSHTRGFVIKLDIEKAFDKICWNFIDKILAFKGYPITWH-------
Query: ------------------------------------------------------------------------DILLFVQDNDAMLGNLFNIIKVFELSSG
DILLF++DND L NL + +FE +SG
Subjt: ------------------------------------------------------------------------DILLFVQDNDAMLGNLFNIIKVFELSSG
Query: LNINFSKSSITGINVEDVRVAQIAANWGCPMAQFPIPYLGSPLGIR-LSDLFFGMGKIKVVASL--W----LIGAWWLRLLRLGVWAYSRLELQIAHFKS
L IN KS++ +NV ++R + A+ WG P+ YLG PLG S LF+ + K+ L W + L L++ + + +L + S
Subjt: LNINFSKSSITGINVEDVRVAQIAANWGCPMAQFPIPYLGSPLGIR-LSDLFFGMGKIKVVASL--W----LIGAWWLRLLRLGVWAYSRLELQIAHFKS
Query: NGFG--DSFMRRLLCGSESSQQNIQPID-----------------------------------------KELFQLRRDSLPP------------RAPWTS
+ F R L +S + I+ + L Q + + P +APW S
Subjt: NGFG--DSFMRRLLCGSESSQQNIQPID-----------------------------------------KELFQLRRDSLPP------------RAPWTS
Query: ILKQASLFLANTVWNLKDGSKISFWHDSWTDHGPLYQAIPRLFALSSRKNMTVSDAWDHTTSSWKLYPRRPLFEREALVQAECASSFPTPALTGGADHML
I+ F +N W+L +G +ISFW+ +W+ G L A PRLFALS K++TV DAW+ + W + RR L +RE A+ P P G+
Subjt: ILKQASLFLANTVWNLKDGSKISFWHDSWTDHGPLYQAIPRLFALSSRKNMTVSDAWDHTTSSWKLYPRRPLFEREALVQAECASSFPTPALTGGADHML
Query: WNPDSKGRFSVASARHFYCNLSSPDRPQPHSIIFSNLWKALIPKK
W PDSK FS+ASA+ P S + +WK+ IP K
Subjt: WNPDSKGRFSVASARHFYCNLSSPDRPQPHSIIFSNLWKALIPKK
|
|
| A0A5D3BPP1 LINE-1 retrotransposable element ORF2 protein | 2.1e-92 | 33.77 | Show/hide |
Query: MVSNLNWCPISGSEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIDIKPSVMEVFYDFYQKDIINCNVNETYITLIPKKNTALQIQDFRS
++ NLNW PI S +L F E E+ + L + NK+PGPDG+T+EF KK W +K V++VF DF++K IIN NVN TYI LI KK+ +D+RS
Subjt: MVSNLNWCPISGSEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIDIKPSVMEVFYDFYQKDIINCNVNETYITLIPKKNTALQIQDFRS
Query: ISLTTVLYRLIAKTLAERLKSTLQGTVSENQLAFVKGRQITDAILVANEVVDFWKCSHTRGFVIKLDIEKAFDKICWNFIDKILAFKGYPITWH------
ISL T LY++IAK +A RLKSTL ++S NQLAFVKGRQIT AIL+ANE VDFW S T+G+V+KLDIEKAFDK+ W+FID +L K YP+ W
Subjt: ISLTTVLYRLIAKTLAERLKSTLQGTVSENQLAFVKGRQITDAILVANEVVDFWKCSHTRGFVIKLDIEKAFDKICWNFIDKILAFKGYPITWH------
Query: -------------------------------------------------------------------------DILLFVQDNDAMLGNLFNIIKVFELSS
DIL+F++D++ + +L N I +FE +S
Subjt: -------------------------------------------------------------------------DILLFVQDNDAMLGNLFNIIKVFELSS
Query: GLNINFSKSSITGINVEDVRVAQIAANWGCPMAQFPIPYLGSPLGIRLSDLFFG---MGKIKVVASLW----LIGAWWLRLLRLGVWAYSRLELQIAHFK
GL IN SKSSI+ +N+ R A++A W P P YL PLG + + F M KI+ S W + L L++ + + +L I FK
Subjt: GLNINFSKSSITGINVEDVRVAQIAANWGCPMAQFPIPYLGSPLGIRLSDLFFG---MGKIKVVASLW----LIGAWWLRLLRLGVWAYSRLELQIAHFK
Query: S-NGFG---DSFMRRLL----------------------CGSESSQQNIQPIDKEL-------FQLRRDSL-----------------PP--------RA
+ +G G + R L C N++ I+ L FQ +DSL PP +A
Subjt: S-NGFG---DSFMRRLL----------------------CGSESSQQNIQPIDKEL-------FQLRRDSL-----------------PP--------RA
Query: PWTSILKQASLFLANTVWNLKDGSKISFWHDSWTDHGPLYQAIPRLFALSSRKNMTVSDAWDHTTSSWKLYPRRPLFEREALVQAECASSFPTPALTGGA
PW I+K+ F ++ W +KDG +SFWH +W G L PRL+ LS +N T+ + WD T+ W L+PRRPL +RE + L GG
Subjt: PWTSILKQASLFLANTVWNLKDGSKISFWHDSWTDHGPLYQAIPRLFALSSRKNMTVSDAWDHTTSSWKLYPRRPLFEREALVQAECASSFPTPALTGGA
Query: DHMLWNPDSKGRFSVASARHFYCNLSSPDRPQPH---SIIFSNLWKALIPKKDQILYLDSYLQKIK-----YNRQASTYFQ
++M+W P+ KG ++ ASA+ + +RP P+ + LWK+ +PKK + + + I R +TY Q
Subjt: DHMLWNPDSKGRFSVASARHFYCNLSSPDRPQPH---SIIFSNLWKALIPKKDQILYLDSYLQKIK-----YNRQASTYFQ
|
|
| A0A5D3DM72 LINE-1 retrotransposable element ORF2 protein | 1.5e-90 | 34.67 | Show/hide |
Query: MVSNLNWCPISGSEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIDIKPSVMEVFYDFYQKDIINCNVNETYITLIPKKNTALQIQDFRS
++ NLNW PIS ++A +L F+E E+ + L A +NKSPGPDGFT+EF+K +W +K ++ +F DF+ IIN VN T I LI KK + D+R
Subjt: MVSNLNWCPISGSEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIDIKPSVMEVFYDFYQKDIINCNVNETYITLIPKKNTALQIQDFRS
Query: ISLTTVLYRLIAKTLAERLKSTLQGTVSENQLAFVKGRQITDAILVANEVVDFWKCSHTRGFVIKLDIEKAFDKICWNFIDKILAFKGYPITWH------
ISLTT +Y+LIAK +AERLK TL TV+ENQ+AFVKGRQI DAILVANE +D+W+ +GFVIKLDIEKAFDK+ W FID +L KGYP W
Subjt: ISLTTVLYRLIAKTLAERLKSTLQGTVSENQLAFVKGRQITDAILVANEVVDFWKCSHTRGFVIKLDIEKAFDKICWNFIDKILAFKGYPITWH------
Query: -----------------------------------------------------------------------DILLFVQDNDAMLGNLFNIIKVFELSSGL
DILLFV+D++ + NL NII +F+L+SGL
Subjt: -----------------------------------------------------------------------DILLFVQDNDAMLGNLFNIIKVFELSSGL
Query: NINFSKSSITGINVEDVRVAQIAANWGCPMAQFPIPYLGSPLG-----------------IRLSDLFFGM----GKIKVV-ASLWLIGAWWLRLLRLGVW
+IN +KS+I+ INV+ R QIA+ WG PI YLG PLG +L+ + M GKI ++ +SL + + L + + V
Subjt: NINFSKSSITGINVEDVRVAQIAANWGCPMAQFPIPYLGSPLG-----------------IRLSDLFFGM----GKIKVV-ASLWLIGAWWLRLLRLGVW
Query: AYSRLE---------------------------------LQIAHFKSNGFG--DSFMRRLLCGSESSQQNIQPIDKELFQLRRDSLP-------PRAPWT
+E L I+ K F ++ R + E S + I+ + L + +P R+PW
Subjt: AYSRLE---------------------------------LQIAHFKSNGFG--DSFMRRLLCGSESSQQNIQPIDKELFQLRRDSLP-------PRAPWT
Query: SILKQASLFLANTVWNLKDGSKISFWHDSWTDHGPLYQAIPRLFALSSRKNMTVSDAWDHTTSSWKLYPRRPLFEREALVQAECASSFPTPALTGGADHM
SI K F + W +K+G SFWH W + PL PRL+ALS+ K ++ D W++T W L PRR L E E + AE +S G D
Subjt: SILKQASLFLANTVWNLKDGSKISFWHDSWTDHGPLYQAIPRLFALSSRKNMTVSDAWDHTTSSWKLYPRRPLFEREALVQAECASSFPTPALTGGADHM
Query: LWNPDSKGRFSVASARHFYCNLSSPDR---PQPHSIIFSNLWKALIPKK
+W +S G ++VAS + L P++ F NLWK IPKK
Subjt: LWNPDSKGRFSVASARHFYCNLSSPDR---PQPHSIIFSNLWKALIPKK
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| O00370 LINE-1 retrotransposable element ORF2 protein | 1.7e-14 | 30 | Show/hide |
Query: ISGSEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIDIKPSVMEVFYDFYQKDIINCNVNETYITLIPKK-NTALQIQDFRSISLTTVLY
++ E SL +P + E+ + ++ KSPGPDGFT EF+++ ++ P ++++F ++ I+ + E I LIPK + ++FR ISL +
Subjt: ISGSEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIDIKPSVMEVFYDFYQKDIINCNVNETYITLIPKK-NTALQIQDFRSISLTTVLY
Query: RLIAKTLAERLKSTLQGTVSENQLAFVKGRQ----ITDAILVANEVVDFWKCSHTRGFVIKLDIEKAFDKICWNFIDKIL
+++ K LA R++ ++ + +Q+ F+ G Q I +I V + +H +I +D EKAFDKI F+ K L
Subjt: RLIAKTLAERLKSTLQGTVSENQLAFVKGRQ----ITDAILVANEVVDFWKCSHTRGFVIKLDIEKAFDKICWNFIDKIL
|
|
| P08548 LINE-1 reverse transcriptase homolog | 1.9e-13 | 28.33 | Show/hide |
Query: ISGSEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIDIKPSVMEVFYDFYQKDIINCNVNETYITLIPKK-NTALQIQDFRSISLTTVLY
+S E L +P S E+ ++ + KSPGPDGFT EF++ ++ P ++ +F + ++ I+ E ITLIPK + +++R ISL +
Subjt: ISGSEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIDIKPSVMEVFYDFYQKDIINCNVNETYITLIPKK-NTALQIQDFRSISLTTVLY
Query: RLIAKTLAERLKSTLQGTVSENQLAFVKGRQ----ITDAILVANEVVDFWKCSHTRGFVIKLDIEKAFDKICWNFIDKIL
+++ K L R++ ++ + +Q+ F+ G Q I +I V + H ++ +D EKAFD I F+ + L
Subjt: RLIAKTLAERLKSTLQGTVSENQLAFVKGRQ----ITDAILVANEVVDFWKCSHTRGFVIKLDIEKAFDKICWNFIDKIL
|
|
| P11369 LINE-1 retrotransposable element ORF2 protein | 1.2e-15 | 30.39 | Show/hide |
Query: ISGSEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIDIKPSVMEVFYDFYQKDIINCNVNETYITLIPK-KNTALQIQDFRSISLTTVLY
++ + L P S E+ + ++ KSPGPDGF+ EF++ D+ P + ++F+ + + + E ITLIPK + +I++FR ISL +
Subjt: ISGSEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIDIKPSVMEVFYDFYQKDIINCNVNETYITLIPK-KNTALQIQDFRSISLTTVLY
Query: RLIAKTLAERLKSTLQGTVSENQLAFVKGRQITDAILVANEVVDFW-KCSHTRGFVIKLDIEKAFDKICWNFIDKILAFKG
+++ K LA R++ ++ + +Q+ F+ G Q I + V+ + K +I LD EKAFDKI F+ K+L G
Subjt: RLIAKTLAERLKSTLQGTVSENQLAFVKGRQITDAILVANEVVDFW-KCSHTRGFVIKLDIEKAFDKICWNFIDKILAFKG
|
|
| P14381 Transposon TX1 uncharacterized 149 kDa protein | 1.5e-18 | 31.93 | Show/hide |
Query: ISGSEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIDIKPSVMEVFYDFYQKDIINCNVNETYITLIPKKNTALQIQDFRSISLTTVLYR
+S L P + E+ Q L+ M HNKSPG DG T+EFF+ W + P V + ++K + + ++L+PKK I+++R +SL + Y+
Subjt: ISGSEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIDIKPSVMEVFYDFYQKDIINCNVNETYITLIPKKNTALQIQDFRSISLTTVLYR
Query: LIAKTLAERLKSTLQGTVSENQLAFVKGRQITDAILVANEVVDFWKCSHTRGFVIKLDIEKAFDKI
++AK ++ RLKS L + +Q V GR I D + + +++ F + + + LD EKAFD++
Subjt: LIAKTLAERLKSTLQGTVSENQLAFVKGRQITDAILVANEVVDFWKCSHTRGFVIKLDIEKAFDKI
|
|
| P16423 Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM | 2.8e-04 | 27.81 | Show/hide |
Query: QNLKA--MGHNKSPGPDGFTVEFFKKSWIDIKPSVMEVFYDFYQKDIINC-----NVNETYITLIPKKNTALQIQDFRSISLTTVLYRLIAKTLAERLKS
Q+L+A + + SPGPDG T + ++ I +M + I+ C ++ IPK TA + QDFR IS+ +VL R + LA RL S
Subjt: QNLKA--MGHNKSPGPDGFTVEFFKKSWIDIKPSVMEVFYDFYQKDIINC-----NVNETYITLIPKKNTALQIQDFRSISLTTVLYRLIAKTLAERLKS
Query: TLQGTVSENQLAFVKGRQITDAILVANEVVDFWKCSHTRGFVIKLDIEKAFDKICWNFIDKILAFKGYP
++ Q F+ D + + V+ ++ LD+ KAFD + I L G P
Subjt: TLQGTVSENQLAFVKGRQITDAILVANEVVDFWKCSHTRGFVIKLDIEKAFDKICWNFIDKILAFKGYP
|
|
