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Lag0012850 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012850
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRAB6-interacting golgin
Genome locationchr1:44957699..44958173
RNA-Seq ExpressionLag0012850
SyntenyLag0012850
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007033 - RAB6-interacting golgin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139478.1 uncharacterized protein LOC101203874 [Cucumis sativus]8.7e-1473.44Show/hide
Query:  MKNSGMISSHVN--AIGSPVREDQDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEEA
        +KNSGMISS+VN   IGSP++EDQ+EE+ RSA  LFRAKEE+IERKKM+M +KVEA LGRAEEA
Subjt:  MKNSGMISSHVN--AIGSPVREDQDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEEA

XP_008461743.1 PREDICTED: probable DNA double-strand break repair Rad50 ATPase [Cucumis melo]5.1e-1474.6Show/hide
Query:  MKNSGMISSHV-NAIGSPVREDQDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEEA
        +KNSGMISS+V N IGSP++EDQ+EE+ RSA  LFRAKEE+IERKKM+M +KVEA LGRAEEA
Subjt:  MKNSGMISSHV-NAIGSPVREDQDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEEA

XP_022142637.1 uncharacterized protein LOC111012700 [Momordica charantia]2.5e-1682.26Show/hide
Query:  MKNSGMISSHVNAIGSPVREDQDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEEA
        ++NSGMI SHVNAIGSP++EDQDEEL RSAF LFRAKEE+IERKKM+M DKVEA LGRAEEA
Subjt:  MKNSGMISSHVNAIGSPVREDQDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEEA

XP_022970344.1 uncharacterized protein LOC111469338 [Cucurbita maxima]7.7e-1078Show/hide
Query:  AIGSPVREDQDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEEA
        AIGSP REDQ+EEL RSA  LFRAKEE+IERKKM+M +KVE  LGRAEEA
Subjt:  AIGSPVREDQDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEEA

XP_038893849.1 uncharacterized protein LOC120082661 [Benincasa hispida]1.8e-1476.19Show/hide
Query:  MKNSG-MISSHVNAIGSPVREDQDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEEA
        +KNSG MISS+VNAIGSPV+EDQ+EE+ RSA  +FRAKEE+IERKKM+M +KVEA LGRAEEA
Subjt:  MKNSG-MISSHVNAIGSPVREDQDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEEA

TrEMBL top hitse value%identityAlignment
A0A0A0LY59 RAB6-interacting golgin4.2e-1473.44Show/hide
Query:  MKNSGMISSHVN--AIGSPVREDQDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEEA
        +KNSGMISS+VN   IGSP++EDQ+EE+ RSA  LFRAKEE+IERKKM+M +KVEA LGRAEEA
Subjt:  MKNSGMISSHVN--AIGSPVREDQDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEEA

A0A1S3CFV6 RAB6-interacting golgin2.5e-1474.6Show/hide
Query:  MKNSGMISSHV-NAIGSPVREDQDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEEA
        +KNSGMISS+V N IGSP++EDQ+EE+ RSA  LFRAKEE+IERKKM+M +KVEA LGRAEEA
Subjt:  MKNSGMISSHV-NAIGSPVREDQDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEEA

A0A5D3CH78 RAB6-interacting golgin2.5e-1474.6Show/hide
Query:  MKNSGMISSHV-NAIGSPVREDQDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEEA
        +KNSGMISS+V N IGSP++EDQ+EE+ RSA  LFRAKEE+IERKKM+M +KVEA LGRAEEA
Subjt:  MKNSGMISSHV-NAIGSPVREDQDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEEA

A0A6J1CNF1 RAB6-interacting golgin1.2e-1682.26Show/hide
Query:  MKNSGMISSHVNAIGSPVREDQDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEEA
        ++NSGMI SHVNAIGSP++EDQDEEL RSAF LFRAKEE+IERKKM+M DKVEA LGRAEEA
Subjt:  MKNSGMISSHVNAIGSPVREDQDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEEA

A0A6J1I589 RAB6-interacting golgin3.7e-1078Show/hide
Query:  AIGSPVREDQDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEEA
        AIGSP REDQ+EEL RSA  LFRAKEE+IERKKM+M +KVE  LGRAEEA
Subjt:  AIGSPVREDQDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27740.1 Family of unknown function (DUF662)2.4e-0951.61Show/hide
Query:  MKNSGMISSHVNAIGSPVREDQDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEEA
        +K+SG IS +    GSP+ ++++EEL +SAF LF+AKE++IER+KM++ D+V+  LG AEEA
Subjt:  MKNSGMISSHVNAIGSPVREDQDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEEA

AT3G09980.1 Family of unknown function (DUF662)1.6e-0532.67Show/hide
Query:  QDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEE------AIDEDSPSKFVRALMVVLRFHTSESNIQSPSVRSGKTLRERERAAQQRKEGFFE
        +DEE+ R+A + FRAKEE+IE+KKM++ ++V+A LGR EE       I E+           V        ++       G T++++ER  ++  E F E
Subjt:  QDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEE------AIDEDSPSKFVRALMVVLRFHTSESNIQSPSVRSGKTLRERERAAQQRKEGFFE

Query:  E
        +
Subjt:  E

AT3G52900.1 Family of unknown function (DUF662)3.2e-0648.39Show/hide
Query:  NSGMIS-SHVNAIGS-PVREDQDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEEA
        NSG  + S VN  G  P+ ++++EE+ + A T F+A+EE+IERKKM + +KV+  LG AEEA
Subjt:  NSGMIS-SHVNAIGS-PVREDQDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEEA

AT3G52920.1 Family of unknown function (DUF662)5.5e-0655Show/hide
Query:  QDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEE
        +DEE+ RSA + FRAKE++IE++KM++ ++V+A LGR EE
Subjt:  QDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEE

AT3G52920.2 Family of unknown function (DUF662)5.5e-0655Show/hide
Query:  QDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEE
        +DEE+ RSA + FRAKE++IE++KM++ ++V+A LGR EE
Subjt:  QDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAACTCGGGCATGATAAGCAGCCATGTGAATGCGATTGGGAGTCCAGTGAGGGAGGATCAAGACGAGGAGCTTCCGAGATCGGCATTCACATTGTTTCGAGCCAA
GGAAGAGAAGATCGAGAGGAAGAAGATGAAAATGGGAGACAAGGTGGAGGCCCACCTTGGACGAGCTGAAGAAGCGATTGACGAAGATTCGCCAAGTAAGTTTGTCCGAG
CATTGATGGTTGTTCTGAGGTTTCACACCAGTGAGAGTAACATCCAGTCGCCATCGGTGAGAAGTGGGAAAACGCTTCGAGAGAGAGAGAGAGCGGCGCAACAACGAAAA
GAGGGCTTCTTCGAAGAGAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAACTCGGGCATGATAAGCAGCCATGTGAATGCGATTGGGAGTCCAGTGAGGGAGGATCAAGACGAGGAGCTTCCGAGATCGGCATTCACATTGTTTCGAGCCAA
GGAAGAGAAGATCGAGAGGAAGAAGATGAAAATGGGAGACAAGGTGGAGGCCCACCTTGGACGAGCTGAAGAAGCGATTGACGAAGATTCGCCAAGTAAGTTTGTCCGAG
CATTGATGGTTGTTCTGAGGTTTCACACCAGTGAGAGTAACATCCAGTCGCCATCGGTGAGAAGTGGGAAAACGCTTCGAGAGAGAGAGAGAGCGGCGCAACAACGAAAA
GAGGGCTTCTTCGAAGAGAGATAA
Protein sequenceShow/hide protein sequence
MKNSGMISSHVNAIGSPVREDQDEELPRSAFTLFRAKEEKIERKKMKMGDKVEAHLGRAEEAIDEDSPSKFVRALMVVLRFHTSESNIQSPSVRSGKTLRERERAAQQRK
EGFFEER