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Lag0012867 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012867
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionphotosystem I reaction center subunit N, chloroplastic
Genome locationchr1:45079800..45080749
RNA-Seq ExpressionLag0012867
SyntenyLag0012867
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0030093 - chloroplast photosystem I (cellular component)
InterPro domainsIPR008796 - Photosystem I reaction centre subunit N, chloroplastic
IPR044907 - Photosystem I reaction centre subunit N superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595132.1 Photosystem I reaction center subunit N, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.1e-8497.08Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSAELNSKLSAV SVASPGVSGYKLPAIRAQQARVPE+KNEGRRTALLFLGASLF AAAA+SNSSANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTV+FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

XP_022963255.1 photosystem I reaction center subunit N, chloroplastic-like isoform X1 [Cucurbita moschata]1.4e-8497.08Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSAELNSKLSAV SVASPGVSGYKLPAIRA+QARVPEAKNEGRRTALLFLGASLF AAAA+SNSSANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTV+FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

XP_023003251.1 photosystem I reaction center subunit N, chloroplastic isoform X1 [Cucurbita maxima]1.1e-8497.08Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSAELNSKLSAV SVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLF AAAA+SNS+ANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTV+FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

XP_023518442.1 photosystem I reaction center subunit N, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]4.8e-8597.66Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSAELNSKLSAV SVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLF AAAA+SNSSANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTV+FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

XP_038883748.1 photosystem I reaction center subunit N, chloroplastic isoform X1 [Benincasa hispida]6.9e-8495.32Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSA+LNSKL+AVPSVASPGV GYKLPAIRAQQARVPEAKNEGRRTALL+LGA+LF AAAAASNSSANAGVIE+YLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFG+CKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

TrEMBL top hitse value%identityAlignment
A0A1S3B240 photosystem I reaction center subunit N, chloroplastic7.4e-8494.74Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSA+LNSKL+AVPSVASPGV GYKLPAIRAQQARVPEAKNEGRRTALL+LGA+LF AAAAASNSSANAGVIE+YLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFG+CKFPENFTGCQDLAKQKKVPFI+DDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

A0A5D3DQX9 Photosystem I reaction center subunit N7.4e-8494.74Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSA+LNSKL+AVPSVASPGV GYKLPAIRAQQARVPEAKNEGRRTALL+LGA+LF AAAAASNSSANAGVIE+YLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFG+CKFPENFTGCQDLAKQKKVPFI+DDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

A0A6J1BT08 photosystem I reaction center subunit N, chloroplastic isoform X11.1e-8293.57Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSAELNSKLSA P VASPGV+GYKLPAIRAQQARVPEAKN+GRRTALL+LGA+LF AAAAASNS+ANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFG+CKFPENFTGCQDLAKQKKVPFISDDL LECEGKDK+KCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

A0A6J1HHG7 photosystem I reaction center subunit N, chloroplastic-like isoform X16.7e-8597.08Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSAELNSKLSAV SVASPGVSGYKLPAIRA+QARVPEAKNEGRRTALLFLGASLF AAAA+SNSSANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTV+FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

A0A6J1KNN3 photosystem I reaction center subunit N, chloroplastic isoform X15.1e-8597.08Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSAELNSKLSAV SVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLF AAAA+SNS+ANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTV+FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

SwissProt top hitse value%identityAlignment
O65107 Photosystem I reaction center subunit N, chloroplastic (Fragment)6.8e-4285.87Show/hide
Query:  SNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        +  SA A + +EYLEKSKANKELNDKKRLATSGANFARAYTVEFGSC+FP NFTGCQDLAKQKKVPFISDDLE+ECEGK+K+KCGSNVFWKW
Subjt:  SNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

P31093 Photosystem I reaction center subunit N, chloroplastic6.5e-4568.75Show/hide
Query:  SAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVEFGSCK
        +AVP  ASP           A   RV  A  + RR+ALL L A    AA AAS  SA A V +EYLEKSK NKELNDKKR ATSGANFARAYTV+FGSCK
Subjt:  SAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVEFGSCK

Query:  FPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        FP NFTGCQDLAKQKKVPFI+DDLE+ECEGK+K+KCGSNVFWKW
Subjt:  FPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

P49107 Photosystem I reaction center subunit N, chloroplastic1.1e-5768.21Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYK-LPAIRAQQARVPEAK-NEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKA
        MA MNSSVL C+YAI+G+GS ELN K+  V S    G      +P I+AQ+    +   + GRR+A++FL A+LF+ AA   ++SANAGVI+EYLE+SK 
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYK-LPAIRAQQARVPEAK-NEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKA

Query:  NKELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        NKELNDKKRLATSGANFARA+TV+FGSCKFPENFTGCQDLAKQKKVPFIS+D+ LECEGKDKYKCGSNVFWKW
Subjt:  NKELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

Q9SBN5 Photosystem I reaction center subunit N, chloroplastic6.4e-2451.52Show/hide
Query:  AIRAQQARVPEAK-----------NEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVEFGSCKFPENFT
        A+RAQ A+V  A+           +   R  LL LG  L    AAA   +ANAGV+E+ L KS ANK LN+KKRLATS AN AR+ TV  G+C+FPENF 
Subjt:  AIRAQQARVPEAK-----------NEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVEFGSCKFPENFT

Query:  GCQDLAKQKKVPFISDDLELECEGKDKYKCGS
        GC++LA  K V +I++DL++ECEGKD   CGS
Subjt:  GCQDLAKQKKVPFISDDLELECEGKDKYKCGS

Arabidopsis top hitse value%identityAlignment
AT5G64040.1 photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)8.2e-5968.21Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYK-LPAIRAQQARVPEAK-NEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKA
        MA MNSSVL C+YAI+G+GS ELN K+  V S    G      +P I+AQ+    +   + GRR+A++FL A+LF+ AA   ++SANAGVI+EYLE+SK 
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYK-LPAIRAQQARVPEAK-NEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKA

Query:  NKELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        NKELNDKKRLATSGANFARA+TV+FGSCKFPENFTGCQDLAKQKKVPFIS+D+ LECEGKDKYKCGSNVFWKW
Subjt:  NKELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

AT5G64040.2 photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)2.9e-4063.89Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYK-LPAIRAQQARVPEAK-NEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKA
        MA MNSSVL C+YAI+G+GS ELN K+  V S    G      +P I+AQ+    +   + GRR+A++FL A+LF+ AA   ++SANAGVI+EYLE+SK 
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYK-LPAIRAQQARVPEAK-NEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKA

Query:  NKELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQK
        NKELNDKKRLATSGANFARA+TV+FGSCKFPENFTGCQDLAKQK
Subjt:  NKELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCATGAATTCCAGCGTTTTGGCCTGCAACTACGCCATTTCAGGCGCTGGATCGGCCGAGCTTAACTCCAAACTCAGCGCTGTGCCTTCTGTCGCATCGCCTGG
GGTTTCTGGTTACAAGTTGCCTGCCATTAGGGCTCAACAGGCTAGGGTTCCTGAAGCCAAGAATGAAGGAAGGAGAACTGCGCTTCTTTTCCTTGGTGCTTCCCTCTTTA
CTGCGGCTGCGGCTGCCTCCAACTCTTCTGCTAATGCTGGAGTCATTGAAGAGTACCTTGAGAAGAGTAAAGCTAACAAGGAATTGAATGACAAGAAGAGATTGGCAACA
AGTGGAGCAAACTTTGCAAGGGCATACACTGTTGAGTTTGGATCATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCAAAGCAAAAGAAAGTTCCATTTAT
CTCAGATGATTTGGAATTGGAGTGTGAAGGGAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACCATGAATTCCAGCGTTTTGGCCTGCAACTACGCCATTTCAGGCGCTGGATCGGCCGAGCTTAACTCCAAACTCAGCGCTGTGCCTTCTGTCGCATCGCCTGG
GGTTTCTGGTTACAAGTTGCCTGCCATTAGGGCTCAACAGGCTAGGGTTCCTGAAGCCAAGAATGAAGGAAGGAGAACTGCGCTTCTTTTCCTTGGTGCTTCCCTCTTTA
CTGCGGCTGCGGCTGCCTCCAACTCTTCTGCTAATGCTGGAGTCATTGAAGAGTACCTTGAGAAGAGTAAAGCTAACAAGGAATTGAATGACAAGAAGAGATTGGCAACA
AGTGGAGCAAACTTTGCAAGGGCATACACTGTTGAGTTTGGATCATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCAAAGCAAAAGAAAGTTCCATTTAT
CTCAGATGATTTGGAATTGGAGTGTGAAGGGAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGGTGA
Protein sequenceShow/hide protein sequence
MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKANKELNDKKRLAT
SGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW