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Lag0012893 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012893
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionB-box zinc finger family protein
Genome locationchr1:45428780..45429323
RNA-Seq ExpressionLag0012893
SyntenyLag0012893
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000315 - B-box-type zinc finger


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022926713.1 B-box zinc finger protein 20-like isoform X1 [Cucurbita moschata]8.5e-2348.94Show/hide
Query:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSP---------------------------------------------
        KIRCDVCDQAEASVFCSADEAALCHG DLHVH ANK AGKHSRFSLLQP+K DSP                                             
Subjt:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSP---------------------------------------------

Query:  ----------------CNGYDGAMDVKIGSSHACSKRPKMA
                         NGY+ AMDVK  SSHACSK PKMA
Subjt:  ----------------CNGYDGAMDVKIGSSHACSKRPKMA

XP_022926721.1 B-box zinc finger protein 20-like isoform X2 [Cucurbita moschata]8.5e-2348.94Show/hide
Query:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSP---------------------------------------------
        KIRCDVCDQAEASVFCSADEAALCHG DLHVH ANK AGKHSRFSLLQP+K DSP                                             
Subjt:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSP---------------------------------------------

Query:  ----------------CNGYDGAMDVKIGSSHACSKRPKMA
                         NGY+ AMDVK  SSHACSK PKMA
Subjt:  ----------------CNGYDGAMDVKIGSSHACSKRPKMA

XP_022971167.1 LOW QUALITY PROTEIN: B-box zinc finger protein 20-like [Cucurbita maxima]5.5e-2248.23Show/hide
Query:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSP---------------------------------------------
        KIRCDVCDQAEASVFCSADEAALCHG DLHVH ANK AGKHSRFSLLQP+K D P                                             
Subjt:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSP---------------------------------------------

Query:  ----------------CNGYDGAMDVKIGSSHACSKRPKMA
                         NGY+ AMDVK  SSHACSK PKMA
Subjt:  ----------------CNGYDGAMDVKIGSSHACSKRPKMA

XP_023531436.1 B-box zinc finger protein 20-like isoform X1 [Cucurbita pepo subsp. pepo]8.5e-2348.94Show/hide
Query:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSP---------------------------------------------
        KIRCDVCDQAEASVFCSADEAALCHG DLHVH ANK AGKHSRFSLLQP+K DSP                                             
Subjt:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSP---------------------------------------------

Query:  ----------------CNGYDGAMDVKIGSSHACSKRPKMA
                         NGY+ AMDVK  SSHACSK PKMA
Subjt:  ----------------CNGYDGAMDVKIGSSHACSKRPKMA

XP_023531437.1 B-box zinc finger protein 20-like isoform X2 [Cucurbita pepo subsp. pepo]8.5e-2348.94Show/hide
Query:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSP---------------------------------------------
        KIRCDVCDQAEASVFCSADEAALCHG DLHVH ANK AGKHSRFSLLQP+K DSP                                             
Subjt:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSP---------------------------------------------

Query:  ----------------CNGYDGAMDVKIGSSHACSKRPKMA
                         NGY+ AMDVK  SSHACSK PKMA
Subjt:  ----------------CNGYDGAMDVKIGSSHACSKRPKMA

TrEMBL top hitse value%identityAlignment
A0A0A0K4F8 Uncharacterized protein1.5e-2046.85Show/hide
Query:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSP---------------------------------------------
        KIRCDVCDQ EASVFC ADEAALCH  DLHVH ANK AGKHSRFSLLQP+K DSP                                             
Subjt:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSP---------------------------------------------

Query:  -------CNGY-----------DGAMDVKIGSSHACSKRPKMA
               C  Y           D AMDVK GSS+ACSKRPKMA
Subjt:  -------CNGY-----------DGAMDVKIGSSHACSKRPKMA

A0A6J1C1I6 B-box zinc finger protein 20 isoform X22.5e-2045.39Show/hide
Query:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSP---------------------------------------------
        KIRCDVCD+AEA+VFCSADEAALCHG DL VH ANK AGKHSRFSLLQP+ T+SP                                             
Subjt:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSP---------------------------------------------

Query:  ----------------CNGYDGAMDVKIGSSHACSKRPKMA
                         +G D  MDVK GSSHACSKRPK A
Subjt:  ----------------CNGYDGAMDVKIGSSHACSKRPKMA

A0A6J1EFP7 B-box zinc finger protein 20-like isoform X24.1e-2348.94Show/hide
Query:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSP---------------------------------------------
        KIRCDVCDQAEASVFCSADEAALCHG DLHVH ANK AGKHSRFSLLQP+K DSP                                             
Subjt:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSP---------------------------------------------

Query:  ----------------CNGYDGAMDVKIGSSHACSKRPKMA
                         NGY+ AMDVK  SSHACSK PKMA
Subjt:  ----------------CNGYDGAMDVKIGSSHACSKRPKMA

A0A6J1EIZ3 B-box zinc finger protein 20-like isoform X14.1e-2348.94Show/hide
Query:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSP---------------------------------------------
        KIRCDVCDQAEASVFCSADEAALCHG DLHVH ANK AGKHSRFSLLQP+K DSP                                             
Subjt:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSP---------------------------------------------

Query:  ----------------CNGYDGAMDVKIGSSHACSKRPKMA
                         NGY+ AMDVK  SSHACSK PKMA
Subjt:  ----------------CNGYDGAMDVKIGSSHACSKRPKMA

A0A6J1I179 LOW QUALITY PROTEIN: B-box zinc finger protein 20-like2.7e-2248.23Show/hide
Query:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSP---------------------------------------------
        KIRCDVCDQAEASVFCSADEAALCHG DLHVH ANK AGKHSRFSLLQP+K D P                                             
Subjt:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSP---------------------------------------------

Query:  ----------------CNGYDGAMDVKIGSSHACSKRPKMA
                         NGY+ AMDVK  SSHACSK PKMA
Subjt:  ----------------CNGYDGAMDVKIGSSHACSKRPKMA

SwissProt top hitse value%identityAlignment
Q0IGM7 B-box zinc finger protein 208.8e-1569.09Show/hide
Query:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSP
        KI C VCD+ EASVFC ADEAALC+G D HVH+ANK AGKH RFSL  P   D+P
Subjt:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSP

Q96288 B-box zinc finger protein 241.6e-0858.7Show/hide
Query:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSL
        KI+CDVC++A A+V C ADEAALC   D+ +H ANK A KH R  L
Subjt:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSL

Q9LQZ7 B-box zinc finger protein 214.4e-1459.09Show/hide
Query:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSPCNGYDGAMDVK
        KIRCDVCD+ EASVFC+ADEA+LC G D  VH+ANK A KH RFSLL P  +++     D   D K
Subjt:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSPCNGYDGAMDVK

Q9SID1 B-box zinc finger protein 251.6e-0850.88Show/hide
Query:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSPCN
        KI+CDVC++A A++ C ADEAALC   D+ VH ANK A KH R  L        PC+
Subjt:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSPCN

Q9SYM2 B-box zinc finger protein 229.4e-0950.88Show/hide
Query:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSPCN
        KI+C+VC+ AEA+V C ADEAALC   D  +H ANK AGKH R  L     +   C+
Subjt:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSPCN

Arabidopsis top hitse value%identityAlignment
AT1G06040.2 B-box zinc finger family protein1.1e-0958.7Show/hide
Query:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSL
        KI+CDVC++A A+V C ADEAALC   D+ +H ANK A KH R  L
Subjt:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSL

AT1G75540.1 salt tolerance homolog23.1e-1559.09Show/hide
Query:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSPCNGYDGAMDVK
        KIRCDVCD+ EASVFC+ADEA+LC G D  VH+ANK A KH RFSLL P  +++     D   D K
Subjt:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSPCNGYDGAMDVK

AT1G78600.1 light-regulated zinc finger protein 16.7e-1050.88Show/hide
Query:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSPCN
        KI+C+VC+ AEA+V C ADEAALC   D  +H ANK AGKH R  L     +   C+
Subjt:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSPCN

AT1G78600.2 light-regulated zinc finger protein 16.7e-1050.88Show/hide
Query:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSPCN
        KI+C+VC+ AEA+V C ADEAALC   D  +H ANK AGKH R  L     +   C+
Subjt:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSPCN

AT4G39070.1 B-box zinc finger family protein6.3e-1669.09Show/hide
Query:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSP
        KI C VCD+ EASVFC ADEAALC+G D HVH+ANK AGKH RFSL  P   D+P
Subjt:  KIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLLQPMKTDSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGATTTTTCTAGAGCTTTTCTTAAAATTAATGGCGAAGAGCCTAAAATACTTTGTCTCCATCTTCGCTTTAAATCCACCTCTCTTTCATCCTCCCTCGGGAATTT
TCAGAAAGTGAAAAGGTGTGAAATCCAGCCACGGGATTTGATTCGGTGTTTGATTTCTTCCGTGGAAGGAAGGATCACGAAGATTCGTTGCGATGTTTGCGATCAAGCTG
AAGCCTCTGTTTTTTGCTCTGCCGATGAAGCCGCTCTTTGCCATGGCTACGATCTCCATGTTCACTACGCTAACAAGTTCGCCGGAAAGCACTCGAGGTTCTCCCTACTT
CAGCCGATGAAAACGGATTCTCCCTGCAATGGCTACGATGGCGCCATGGATGTTAAAATTGGAAGCTCCCACGCTTGCAGCAAGAGGCCTAAAATGGCCGGTATGACCAT
GCCCTTTCCTTCTCTCTTTCTCTCTCTAGATTCGTTTTCTTGTTCGCGTGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGATTTTTCTAGAGCTTTTCTTAAAATTAATGGCGAAGAGCCTAAAATACTTTGTCTCCATCTTCGCTTTAAATCCACCTCTCTTTCATCCTCCCTCGGGAATTT
TCAGAAAGTGAAAAGGTGTGAAATCCAGCCACGGGATTTGATTCGGTGTTTGATTTCTTCCGTGGAAGGAAGGATCACGAAGATTCGTTGCGATGTTTGCGATCAAGCTG
AAGCCTCTGTTTTTTGCTCTGCCGATGAAGCCGCTCTTTGCCATGGCTACGATCTCCATGTTCACTACGCTAACAAGTTCGCCGGAAAGCACTCGAGGTTCTCCCTACTT
CAGCCGATGAAAACGGATTCTCCCTGCAATGGCTACGATGGCGCCATGGATGTTAAAATTGGAAGCTCCCACGCTTGCAGCAAGAGGCCTAAAATGGCCGGTATGACCAT
GCCCTTTCCTTCTCTCTTTCTCTCTCTAGATTCGTTTTCTTGTTCGCGTGCATGA
Protein sequenceShow/hide protein sequence
MADFSRAFLKINGEEPKILCLHLRFKSTSLSSSLGNFQKVKRCEIQPRDLIRCLISSVEGRITKIRCDVCDQAEASVFCSADEAALCHGYDLHVHYANKFAGKHSRFSLL
QPMKTDSPCNGYDGAMDVKIGSSHACSKRPKMAGMTMPFPSLFLSLDSFSCSRA