; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0012909 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012909
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionWD repeat domain-containing protein 83
Genome locationchr1:45598851..45600933
RNA-Seq ExpressionLag0012909
SyntenyLag0012909
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0071013 - catalytic step 2 spliceosome (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025565.1 WD repeat domain-containing protein 83 [Cucumis melo var. makuwa]6.1e-16397.89Show/hide
Query:  MSVSELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
        MSVSELPTKE+NVLKGHEGGVLAARFN+DGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT DNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
Subjt:  MSVSELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG

Query:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
Subjt:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSFTFSVLCD
        ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGF+YFWDLVDASVVSKFRAHSSVVSLYS TFSVLC+
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSFTFSVLCD

KAG6604265.1 WD repeat domain-containing protein 83, partial [Cucurbita argyrosperma subsp. sororia]2.3e-15798.54Show/hide
Query:  MSVSELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
        MSVSELPTKEANVLKGHEGGVLAARFN+DGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT DNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
Subjt:  MSVSELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG

Query:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
Subjt:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVS
        ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDG+IYFWDLVDASVVSKFRAHSSVV+
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVS

XP_008440996.1 PREDICTED: WD repeat domain-containing protein 83 [Cucumis melo]1.3e-15797.12Show/hide
Query:  MSVSELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
        MSVSELPTKE+NVLKGHEGGVLAARFN+DGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT DNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
Subjt:  MSVSELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG

Query:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
Subjt:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSF
        ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGF+YFWDLVDASVVSKFRAHSSVV+  S+
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSF

XP_022949610.1 WD repeat domain-containing protein 83 [Cucurbita moschata]1.3e-15797.12Show/hide
Query:  MSVSELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
        MSVSELPTKEANVLKGHEGGVLAARFN+DGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT DNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
Subjt:  MSVSELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG

Query:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANC+L
Subjt:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSF
        ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDG+IYFWDLVDASVVSKFRAHSSVV+  S+
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSF

XP_038880882.1 WD repeat domain-containing protein 83 [Benincasa hispida]3.8e-15797.12Show/hide
Query:  MSVSELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
        MSVSELPTKE+NVLKGHEGGVLAARFN+DGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT DNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
Subjt:  MSVSELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG

Query:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLG PVNCISMSNDANCIL
Subjt:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSF
        ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVV+  S+
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSF

TrEMBL top hitse value%identityAlignment
A0A0A0KFA7 WD_REPEATS_REGION domain-containing protein5.4e-15796.76Show/hide
Query:  MSVSELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
        MSVSELPTKE+NVLKGHEGGVLAARFN+DGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT DNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
Subjt:  MSVSELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG

Query:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQ VNCISMSNDANCIL
Subjt:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSF
        ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGF+YFWDLVDASVVSKFRAHSSVV+  S+
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSF

A0A1S3B1Y9 WD repeat domain-containing protein 836.4e-15897.12Show/hide
Query:  MSVSELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
        MSVSELPTKE+NVLKGHEGGVLAARFN+DGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT DNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
Subjt:  MSVSELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG

Query:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
Subjt:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSF
        ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGF+YFWDLVDASVVSKFRAHSSVV+  S+
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSF

A0A5D3CQ40 WD repeat domain-containing protein 833.0e-16397.89Show/hide
Query:  MSVSELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
        MSVSELPTKE+NVLKGHEGGVLAARFN+DGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT DNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
Subjt:  MSVSELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG

Query:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
Subjt:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSFTFSVLCD
        ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGF+YFWDLVDASVVSKFRAHSSVVSLYS TFSVLC+
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSFTFSVLCD

A0A6J1GD83 WD repeat domain-containing protein 836.4e-15897.12Show/hide
Query:  MSVSELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
        MSVSELPTKEANVLKGHEGGVLAARFN+DGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT DNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
Subjt:  MSVSELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG

Query:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANC+L
Subjt:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSF
        ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDG+IYFWDLVDASVVSKFRAHSSVV+  S+
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSF

A0A6J1IRS5 WD repeat domain-containing protein 837.1e-15796.76Show/hide
Query:  MSVSELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
        MSVSELPTKEANVLKGHEGGVLAARFN+DGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT DNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
Subjt:  MSVSELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG

Query:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFNE ASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANC+L
Subjt:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSF
        ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDG+IYFWDLVDASVVSKFRAHSSVV+  S+
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSF

SwissProt top hitse value%identityAlignment
Q3KQ62 WD repeat domain-containing protein 834.5e-8451.79Show/hide
Query:  ELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGE
        ELP K  + L+ ++G V A RFN DGNYC++CG D++++LWNPH+G  +KTY  HG EV D   + DNS+LCSC  D+ V  WDV+ G+V+RKFRGH G+
Subjt:  ELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGE

Query:  VNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCILASCL
        VN V+FNE A+V++S   D S+R WDCRS   + IQI+D   D + SV ++  EI+ GSVDG +R +D+R G   +D LG P+ C+S S D+ C+LAS L
Subjt:  VNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCILASCL

Query:  DSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSFTFSVLC
        DSTLRLLD+ +GELL EY GH   SYKLD CL+  D HV   SEDG + FWDLV+ S+V K     +VV   SF  +  C
Subjt:  DSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSFTFSVLC

Q5BLX8 WD repeat domain-containing protein 832.9e-8352.19Show/hide
Query:  ELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGE
        ELP K+   L   +G V A RFN DGNYCL+CG D+T++LWNP RG  ++TY  HG EV D   + DNS LCS GGD+ V  WDV+TG+V+RKFRGH G+
Subjt:  ELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGE

Query:  VNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCILASCL
        VN V+FNE A+V++S   D S+R WDCRS   EP+Q +D   D + SV ++  EI+ GSVDG VR +D+R+G+  SD +G P+ C   S D  C L S L
Subjt:  VNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCILASCL

Query:  DSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSF
        DSTLRLLD+ +GELL EY GH  + YKLDCCL+  D HV   SEDG ++FWDLV+ S+       S+VV   ++
Subjt:  DSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSF

Q5XGI5 WD repeat domain-containing protein 831.5e-8451.79Show/hide
Query:  ELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGE
        ELP K  + L+ ++G V A RFN DGNYC++CG D+T++LWNPH+G  +KTY  HG EV D   + DNS++CSC  D+ V  WDV+ G+V+RKFRGH G+
Subjt:  ELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGE

Query:  VNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCILASCL
        VN V+FNE A+V++S   D S+R WDCRS   E IQI+D   D + S+ ++  EI+ GSVDG +R +D+R G   +D LG P+ C+S S D+ C+LAS L
Subjt:  VNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCILASCL

Query:  DSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSFTFSVLC
        DSTLRLLD+ +GELL EY GH   SYKLD CL+  D HV   SEDG + FWDLV+ S+V K     + V   SF  S  C
Subjt:  DSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSFTFSVLC

Q9BRX9 WD repeat domain-containing protein 832.9e-8352.19Show/hide
Query:  ELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGE
        ELP K    L   +G V A RFN DGNYCL+CG D+T++LWNP RG  ++TY  HG EV D   + DNS LCS GGD+ V  WDV++G+V+RKFRGH G+
Subjt:  ELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGE

Query:  VNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCILASCL
        VN V+FNE A+V++S   D S+R WDCRS   EP+Q +D   D V SV ++  EI+ GSVDG VR +D+R+G+  SD +G P+ C   S D  C L S L
Subjt:  VNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCILASCL

Query:  DSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSF
        DSTLRLLD+ +GELL EYKGH  + YKLDCCL+  D HV   SEDG ++FWDLV+ ++       S VV   ++
Subjt:  DSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSF

Q9DAJ4 WD repeat domain-containing protein 831.1e-8251.82Show/hide
Query:  ELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGE
        ELP K    L   +G V A RFN DGNYCL+CG D+T++LWNP RG  ++TY  HG EV D   + DNS LCS GGD+ V  WDV+TG+V+RKFRGH G+
Subjt:  ELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGE

Query:  VNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCILASCL
        VN V+FNE A+V++S   D S+R WDCRS   EP+Q +D   D + SV ++  EI+ GSVDG VR +D+R+G+  SD +G P+ C   S D  C L S L
Subjt:  VNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCILASCL

Query:  DSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSF
        DSTLRLLD+ +GELL EY GH  + YKLDCCL+  D HV   SEDG ++FWDLV+ ++       S+VV   ++
Subjt:  DSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSF

Arabidopsis top hitse value%identityAlignment
AT2G43770.1 Transducin/WD40 repeat-like superfamily protein5.4e-2427.54Show/hide
Query:  VLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGI-HIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGEVNA-VKF
        +L GH   V   +FN  G    S   DR I LW  H    +    K H   + D+H TSD S++ S   D+ V  WDV TG+ I+K   H   VN+    
Subjt:  VLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGI-HIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGEVNA-VKF

Query:  NEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSE----IIGGSVDGTVRTFDMRIGREISDNLG--QPVNCISMSNDANCILASCL
             +++S   D + + WD R         I TF D      ++ S+    I  G VD  V+ +D+R G       G    +  +S+S D + +L + +
Subjt:  NEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSE----IIGGSVDGTVRTFDMRIGREISDNLG--QPVNCISMSNDANCILASCL

Query:  DSTLRLLD----RSSGELLQEYKGHTCKSYK--LDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVS
        D+ L + D          ++ ++GH     K  L C  +     VT GS D  ++ WD      + K   H+  V+
Subjt:  DSTLRLLD----RSSGELLQEYKGHTCKSYK--LDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVS

AT3G49660.1 Transducin/WD40 repeat-like superfamily protein5.4e-3227.53Show/hide
Query:  SVSELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLW-----NPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIR
        + S  P   +  L  H   V + +F++DG    S   D+TIR +     N      ++ +  H   + DV  +SD   + S   D+ +  WDV TG +I+
Subjt:  SVSELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLW-----NPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIR

Query:  KFRGHDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTK--SEIIGGSVDGTVRTFDMRIG---REISDNLGQPVNCIS
           GH      V FN  ++++VS  +D+++R WD  +     ++++   SD V +V   +  S I+  S DG  R +D   G   + + D+   PV+ + 
Subjt:  KFRGHDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTK--SEIIGGSVDGTVRTFDMRIG---REISDNLGQPVNCIS

Query:  MSNDANCILASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDA-HVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSFTFSVLCDPSSLL
         S +   IL   LD+TLRL + SS + L+ Y GH    Y +    + T+   +  GSED  ++ W+L    ++ K   H+  V       +V C P+  L
Subjt:  MSNDANCILASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDA-HVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSFTFSVLCDPSSLL

Query:  YVALSGIFGVYDKMLR
          +     G  DK +R
Subjt:  YVALSGIFGVYDKMLR

AT4G02730.1 Transducin/WD40 repeat-like superfamily protein1.8e-3228.22Show/hide
Query:  PTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDV-STGRVIRKFRGHDGEV
        P +    L+GH   +   +F+ DGN   S   D+T+ LW+      I  Y+ H   + D+  +SD+   CS   D  +  WD  S    ++  RGH   V
Subjt:  PTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDV-STGRVIRKFRGHDGEV

Query:  NAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTK--SEIIGGSVDGTVRTFDMRIG---REISDNLGQPVNCISMSNDANCIL
          V FN  ++++VS  +D+++R W+ ++     +++I   S  + SV   +  S I+  S DG+ + +D + G   + + D+    V+    S +   IL
Subjt:  NAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTK--SEIIGGSVDGTVRTFDMRIG---REISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDA-HVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSFTFSVLCDP
         + LDSTL+L + ++G+ L+ Y GHT K + +    + T+  ++  GSED  +Y WDL   +++ +   H+  V       SV C P
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDA-HVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSFTFSVLCDP

AT5G50230.1 Transducin/WD40 repeat-like superfamily protein1.0e-3028.17Show/hide
Query:  SELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDG
        S +P+  AN +  HEGG  +  F  +     + G+DR +++W+ + G  IK+       + D+ VT DN  + +      +F WDVS+GRV     GH  
Subjt:  SELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDG

Query:  EVNAVKFNEYAS-VVVSAGYDQSLRAWDC-RSHSTEPIQIIDTFSDSVMSVCLTKS--EIIGGSVDGTVRTFDMRIGREISDNLG--QPVNCISMSNDAN
        +V AV  ++++S  VVSA YD++++ WD  + + T  +     F+ +  ++CL+     +  G +DG +R +D++ G+ +S+  G    V  +S+S + N
Subjt:  EVNAVKFNEYAS-VVVSAGYDQSLRAWDC-RSHSTEPIQIIDTFSDSVMSVCLTKS--EIIGGSVDGTVRTFDMRIGREISDNLG--QPVNCISMSNDAN

Query:  CILASCLDSTLRLLDRSSGELLQEYK--GHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSFT
         IL S  D+   + D  + E+    +  G+   S     C++  D +V  GS DG ++ W L   ++VS  +  +S +   S++
Subjt:  CILASCLDSTLRLLDRSSGELLQEYK--GHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSFT

AT5G64730.1 Transducin/WD40 repeat-like superfamily protein1.7e-13982.37Show/hide
Query:  MSVSELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
        MS +ELPTKEA++LKGHEG VLAARFN DGNY L+CGKDRTIRLWNPHRGI IKTYKSHGREVRDVHVTSDN+K CSCGGDRQV+YWDVSTGRVIRKFRG
Subjt:  MSVSELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG

Query:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFN+ +SVVVSAG+D+SLR WDCRSHS EP+QIIDTF D+VMSV LTK+EIIGGSVDGTVRTFDMRIGRE+SDNLGQPVNCIS+SND NC+L
Subjt:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSF
        A CLDSTLRLLDR++GELLQ YKGH  KS+K DCCLTN+DAHV GGSEDG ++FWDLVDA V+SKFRAH  VV+  S+
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTATCAGAATTGCCCACCAAGGAAGCTAATGTCCTCAAGGGGCATGAAGGTGGAGTTCTAGCTGCGAGGTTCAATGCCGATGGCAATTATTGCCTCAGCTGTGG
CAAGGACCGCACAATTCGCCTCTGGAATCCTCACCGTGGTATTCACATCAAGACCTACAAATCCCACGGCCGTGAAGTCCGTGATGTCCATGTCACCTCAGACAACTCCA
AGTTATGTTCATGCGGTGGTGATCGGCAAGTCTTCTATTGGGATGTATCTACAGGACGCGTCATTCGAAAATTTCGAGGCCATGATGGTGAGGTGAATGCTGTGAAATTT
AACGAGTATGCTTCTGTCGTAGTCTCAGCAGGCTATGATCAATCATTGCGTGCTTGGGACTGCAGATCTCATAGCACTGAGCCAATTCAGATCATTGATACATTTTCAGA
CAGTGTAATGTCTGTTTGCTTAACAAAAAGTGAAATTATTGGAGGAAGTGTTGATGGCACTGTTCGAACATTTGATATGCGAATTGGCAGAGAAATATCAGATAACTTGG
GGCAGCCTGTAAATTGTATTTCCATGTCCAATGACGCCAATTGCATATTAGCTAGTTGCTTAGATTCCACTCTCCGTCTATTGGACAGGTCTTCTGGCGAGCTATTACAA
GAATATAAGGGCCATACTTGTAAGTCTTACAAGCTGGATTGCTGCCTTACCAATACTGATGCACATGTAACTGGCGGATCTGAGGATGGATTCATTTATTTCTGGGATTT
AGTAGATGCATCTGTTGTCTCCAAGTTTCGAGCTCATTCCTCTGTTGTAAGTCTTTATTCCTTCACCTTCTCAGTTTTATGTGATCCAAGTTCATTATTGTATGTTGCTC
TCTCAGGTATTTTTGGTGTTTATGATAAAATGCTTAGATTCAAAAGACGCATATTCCTTGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGTATCAGAATTGCCCACCAAGGAAGCTAATGTCCTCAAGGGGCATGAAGGTGGAGTTCTAGCTGCGAGGTTCAATGCCGATGGCAATTATTGCCTCAGCTGTGG
CAAGGACCGCACAATTCGCCTCTGGAATCCTCACCGTGGTATTCACATCAAGACCTACAAATCCCACGGCCGTGAAGTCCGTGATGTCCATGTCACCTCAGACAACTCCA
AGTTATGTTCATGCGGTGGTGATCGGCAAGTCTTCTATTGGGATGTATCTACAGGACGCGTCATTCGAAAATTTCGAGGCCATGATGGTGAGGTGAATGCTGTGAAATTT
AACGAGTATGCTTCTGTCGTAGTCTCAGCAGGCTATGATCAATCATTGCGTGCTTGGGACTGCAGATCTCATAGCACTGAGCCAATTCAGATCATTGATACATTTTCAGA
CAGTGTAATGTCTGTTTGCTTAACAAAAAGTGAAATTATTGGAGGAAGTGTTGATGGCACTGTTCGAACATTTGATATGCGAATTGGCAGAGAAATATCAGATAACTTGG
GGCAGCCTGTAAATTGTATTTCCATGTCCAATGACGCCAATTGCATATTAGCTAGTTGCTTAGATTCCACTCTCCGTCTATTGGACAGGTCTTCTGGCGAGCTATTACAA
GAATATAAGGGCCATACTTGTAAGTCTTACAAGCTGGATTGCTGCCTTACCAATACTGATGCACATGTAACTGGCGGATCTGAGGATGGATTCATTTATTTCTGGGATTT
AGTAGATGCATCTGTTGTCTCCAAGTTTCGAGCTCATTCCTCTGTTGTAAGTCTTTATTCCTTCACCTTCTCAGTTTTATGTGATCCAAGTTCATTATTGTATGTTGCTC
TCTCAGGTATTTTTGGTGTTTATGATAAAATGCTTAGATTCAAAAGACGCATATTCCTTGCATAA
Protein sequenceShow/hide protein sequence
MSVSELPTKEANVLKGHEGGVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGEVNAVKF
NEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCILASCLDSTLRLLDRSSGELLQ
EYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASVVSKFRAHSSVVSLYSFTFSVLCDPSSLLYVALSGIFGVYDKMLRFKRRIFLA