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Lag0012982 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012982
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionABC transporter I family member 17
Genome locationchr1:46332954..46337297
RNA-Seq ExpressionLag0012982
SyntenyLag0012982
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587709.1 ABC transporter I family member 17, partial [Cucurbita argyrosperma subsp. sororia]3.4e-1659.78Show/hide
Query:  IIPDSLVPTDHFDGIREFFKSSCHLLVVDEESENEGADDHVKIQIRNLTKFSDGKENSILRGV--------IVGIRGSSGGDKSTTNLIRNR
        +IPD+L P D  DGIR+  +   HLLVV+EE+EN G DDHVKI+IRNLTKFSDGKEN ILRG+        IVGI G SG  KST     NR
Subjt:  IIPDSLVPTDHFDGIREFFKSSCHLLVVDEESENEGADDHVKIQIRNLTKFSDGKENSILRGV--------IVGIRGSSGGDKSTTNLIRNR

KAG7021677.1 ABC transporter I family member 17, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-1659.78Show/hide
Query:  IIPDSLVPTDHFDGIREFFKSSCHLLVVDEESENEGADDHVKIQIRNLTKFSDGKENSILRGV--------IVGIRGSSGGDKSTTNLIRNR
        +IPD+L P D  DGIR+  +   HLLVV+EE+EN G DDHVKI+IRNLTKFSDGKEN ILRG+        IVGI G SG  KST     NR
Subjt:  IIPDSLVPTDHFDGIREFFKSSCHLLVVDEESENEGADDHVKIQIRNLTKFSDGKENSILRGV--------IVGIRGSSGGDKSTTNLIRNR

XP_022931455.1 ABC transporter I family member 17 [Cucurbita moschata]7.6e-1658.7Show/hide
Query:  IIPDSLVPTDHFDGIREFFKSSCHLLVVDEESENEGADDHVKIQIRNLTKFSDGKENSILRGV--------IVGIRGSSGGDKSTTNLIRNR
        +IPD+L P D  DGIR+  +   HLLVV+EE++N G DDHVKI+IRNLTKFSDGKEN ILRG+        IVGI G SG  KST     NR
Subjt:  IIPDSLVPTDHFDGIREFFKSSCHLLVVDEESENEGADDHVKIQIRNLTKFSDGKENSILRGV--------IVGIRGSSGGDKSTTNLIRNR

XP_023531144.1 ABC transporter I family member 17 isoform X1 [Cucurbita pepo subsp. pepo]1.3e-1558.7Show/hide
Query:  IIPDSLVPTDHFDGIREFFKSSCHLLVVDEESENEGADDHVKIQIRNLTKFSDGKENSILRGV--------IVGIRGSSGGDKSTTNLIRNR
        +IPD+L P D  DGIR+  +   HLLVV+EE+E+ G DDHVKI+IRNLTKFSDGKEN ILRG+        IVGI G SG  KST     NR
Subjt:  IIPDSLVPTDHFDGIREFFKSSCHLLVVDEESENEGADDHVKIQIRNLTKFSDGKENSILRGV--------IVGIRGSSGGDKSTTNLIRNR

XP_023531145.1 ABC transporter I family member 17 isoform X2 [Cucurbita pepo subsp. pepo]1.3e-1558.7Show/hide
Query:  IIPDSLVPTDHFDGIREFFKSSCHLLVVDEESENEGADDHVKIQIRNLTKFSDGKENSILRGV--------IVGIRGSSGGDKSTTNLIRNR
        +IPD+L P D  DGIR+  +   HLLVV+EE+E+ G DDHVKI+IRNLTKFSDGKEN ILRG+        IVGI G SG  KST     NR
Subjt:  IIPDSLVPTDHFDGIREFFKSSCHLLVVDEESENEGADDHVKIQIRNLTKFSDGKENSILRGV--------IVGIRGSSGGDKSTTNLIRNR

TrEMBL top hitse value%identityAlignment
A0A1S3BWK2 ABC transporter I family member 178.0e-1154.12Show/hide
Query:  IIPDSLVPTDHFDGIREFFKSSCHLLVVDEESENEGADDHVKIQIRNLT-KFSDGKENSILRGVIVGIRGSSGGDKSTTNLIRNR
        +IPD+L P +  DGI +  +   HLLVV+EE EN G DDHVKI+IRNLT +   G    I +G IVGI G SGG KSTT    NR
Subjt:  IIPDSLVPTDHFDGIREFFKSSCHLLVVDEESENEGADDHVKIQIRNLT-KFSDGKENSILRGVIVGIRGSSGGDKSTTNLIRNR

A0A5A7USP2 ABC transporter I family member 178.0e-1154.12Show/hide
Query:  IIPDSLVPTDHFDGIREFFKSSCHLLVVDEESENEGADDHVKIQIRNLT-KFSDGKENSILRGVIVGIRGSSGGDKSTTNLIRNR
        +IPD+L P +  DGI +  +   HLLVV+EE EN G DDHVKI+IRNLT +   G    I +G IVGI G SGG KSTT    NR
Subjt:  IIPDSLVPTDHFDGIREFFKSSCHLLVVDEESENEGADDHVKIQIRNLT-KFSDGKENSILRGVIVGIRGSSGGDKSTTNLIRNR

A0A6J1C3V7 ABC transporter I family member 178.5e-1355.32Show/hide
Query:  IIPDSLVPTDHFDG--IREFFKSSCHLLVVDEESENEGADDHVKIQIRNLTKFSDGKENSILRGV--------IVGIRGSSGGDKSTTNLIRNR
        +IPDS+ P  H +G  +RE      HLLVV EESE+ G D H+KI+IRNLTK SDG EN ILRG+        IVGI G SGG KSTT    NR
Subjt:  IIPDSLVPTDHFDG--IREFFKSSCHLLVVDEESENEGADDHVKIQIRNLTKFSDGKENSILRGV--------IVGIRGSSGGDKSTTNLIRNR

A0A6J1EZG7 ABC transporter I family member 173.7e-1658.7Show/hide
Query:  IIPDSLVPTDHFDGIREFFKSSCHLLVVDEESENEGADDHVKIQIRNLTKFSDGKENSILRGV--------IVGIRGSSGGDKSTTNLIRNR
        +IPD+L P D  DGIR+  +   HLLVV+EE++N G DDHVKI+IRNLTKFSDGKEN ILRG+        IVGI G SG  KST     NR
Subjt:  IIPDSLVPTDHFDGIREFFKSSCHLLVVDEESENEGADDHVKIQIRNLTKFSDGKENSILRGV--------IVGIRGSSGGDKSTTNLIRNR

A0A6J1IG80 ABC transporter I family member 174.1e-1557.61Show/hide
Query:  IIPDSLVPTDHFDGIREFFKSSCHLLVVDEESENEGADDHVKIQIRNLTKFSDGKENSILRGV--------IVGIRGSSGGDKSTTNLIRNR
        +I D+L P D  DGIR+  +   HLLVV+EE++N G DDHVKI+IRNLTKFSDGKEN ILRG+        IVGI G SG  KST     NR
Subjt:  IIPDSLVPTDHFDGIREFFKSSCHLLVVDEESENEGADDHVKIQIRNLTKFSDGKENSILRGV--------IVGIRGSSGGDKSTTNLIRNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGAAAAGGGAGCTCCGGTGTCAAGCATCAAGGGAACCAACGAACAAAGCCTTGCATGCCCCAAATTGAGAAGAGAAGCCCCTTCGCTTTCACTCGGTGCTAAAAT
GTCTCTTCATTCAGTTCCATCTTCATCTGATTCGATGCCATTATTTATGTTTACCACCGCCAAGCTCTTCCAATTTTGTCTCTCTCAAATCCCCTTCGTTCCGAACAGAA
TTATTCCAGATTCTCTTGTTCCGACCGACCACTTTGACGGTATCCGTGAGTTCTTCAAATCTTCTTGTCATCTGCTGGTGGTGGACGAGGAAAGTGAAAACGAAGGAGCG
GACGATCATGTGAAGATTCAGATACGTAATTTGACGAAGTTTTCAGATGGAAAGGAGAATTCGATTCTGAGAGGAGTTATCGTTGGAATTAGAGGGTCGAGCGGCGGCGA
CAAATCCACAACGAATTTGATCAGAAATCGAGCGAATTTGAAATGGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGAAAAGGGAGCTCCGGTGTCAAGCATCAAGGGAACCAACGAACAAAGCCTTGCATGCCCCAAATTGAGAAGAGAAGCCCCTTCGCTTTCACTCGGTGCTAAAAT
GTCTCTTCATTCAGTTCCATCTTCATCTGATTCGATGCCATTATTTATGTTTACCACCGCCAAGCTCTTCCAATTTTGTCTCTCTCAAATCCCCTTCGTTCCGAACAGAA
TTATTCCAGATTCTCTTGTTCCGACCGACCACTTTGACGGTATCCGTGAGTTCTTCAAATCTTCTTGTCATCTGCTGGTGGTGGACGAGGAAAGTGAAAACGAAGGAGCG
GACGATCATGTGAAGATTCAGATACGTAATTTGACGAAGTTTTCAGATGGAAAGGAGAATTCGATTCTGAGAGGAGTTATCGTTGGAATTAGAGGGTCGAGCGGCGGCGA
CAAATCCACAACGAATTTGATCAGAAATCGAGCGAATTTGAAATGGAGATGA
Protein sequenceShow/hide protein sequence
MIEKGAPVSSIKGTNEQSLACPKLRREAPSLSLGAKMSLHSVPSSSDSMPLFMFTTAKLFQFCLSQIPFVPNRIIPDSLVPTDHFDGIREFFKSSCHLLVVDEESENEGA
DDHVKIQIRNLTKFSDGKENSILRGVIVGIRGSSGGDKSTTNLIRNRANLKWR