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Lag0012995 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012995
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSHR-BD domain-containing protein
Genome locationchr1:46471559..46472867
RNA-Seq ExpressionLag0012995
SyntenyLag0012995
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR026847 - Vacuolar protein sorting-associated protein 13


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132799.1 uncharacterized protein LOC111005570 isoform X1 [Momordica charantia]4.4e-3886.6Show/hide
Query:  AQDSRTYPGPLIVVEISQHPEDGLLIVVSPVTRIHNESGLTMELRFRRNQPKEDECASVFLKPGDVIDDSMAMFDALNSSGGLRKALMSLCVDDTLL
        A+DSRTYPGPLIVVEIS+HPEDGL IVVSP+TRIHNESGLTMELRFRRNQPKEDECASV ++P DVIDDSM MFDALNSSGGLRKALMSL V + LL
Subjt:  AQDSRTYPGPLIVVEISQHPEDGLLIVVSPVTRIHNESGLTMELRFRRNQPKEDECASVFLKPGDVIDDSMAMFDALNSSGGLRKALMSLCVDDTLL
XP_022132800.1 uncharacterized protein LOC111005570 isoform X2 [Momordica charantia]4.4e-3886.6Show/hide
Query:  AQDSRTYPGPLIVVEISQHPEDGLLIVVSPVTRIHNESGLTMELRFRRNQPKEDECASVFLKPGDVIDDSMAMFDALNSSGGLRKALMSLCVDDTLL
        A+DSRTYPGPLIVVEIS+HPEDGL IVVSP+TRIHNESGLTMELRFRRNQPKEDECASV ++P DVIDDSM MFDALNSSGGLRKALMSL V + LL
Subjt:  AQDSRTYPGPLIVVEISQHPEDGLLIVVSPVTRIHNESGLTMELRFRRNQPKEDECASVFLKPGDVIDDSMAMFDALNSSGGLRKALMSLCVDDTLL
XP_022132801.1 uncharacterized protein LOC111005570 isoform X3 [Momordica charantia]4.4e-3886.6Show/hide
Query:  AQDSRTYPGPLIVVEISQHPEDGLLIVVSPVTRIHNESGLTMELRFRRNQPKEDECASVFLKPGDVIDDSMAMFDALNSSGGLRKALMSLCVDDTLL
        A+DSRTYPGPLIVVEIS+HPEDGL IVVSP+TRIHNESGLTMELRFRRNQPKEDECASV ++P DVIDDSM MFDALNSSGGLRKALMSL V + LL
Subjt:  AQDSRTYPGPLIVVEISQHPEDGLLIVVSPVTRIHNESGLTMELRFRRNQPKEDECASVFLKPGDVIDDSMAMFDALNSSGGLRKALMSLCVDDTLL
XP_022132802.1 uncharacterized protein LOC111005570 isoform X4 [Momordica charantia]4.4e-3886.6Show/hide
Query:  AQDSRTYPGPLIVVEISQHPEDGLLIVVSPVTRIHNESGLTMELRFRRNQPKEDECASVFLKPGDVIDDSMAMFDALNSSGGLRKALMSLCVDDTLL
        A+DSRTYPGPLIVVEIS+HPEDGL IVVSP+TRIHNESGLTMELRFRRNQPKEDECASV ++P DVIDDSM MFDALNSSGGLRKALMSL V + LL
Subjt:  AQDSRTYPGPLIVVEISQHPEDGLLIVVSPVTRIHNESGLTMELRFRRNQPKEDECASVFLKPGDVIDDSMAMFDALNSSGGLRKALMSLCVDDTLL
XP_022132804.1 uncharacterized protein LOC111005570 isoform X6 [Momordica charantia]4.4e-3886.6Show/hide
Query:  AQDSRTYPGPLIVVEISQHPEDGLLIVVSPVTRIHNESGLTMELRFRRNQPKEDECASVFLKPGDVIDDSMAMFDALNSSGGLRKALMSLCVDDTLL
        A+DSRTYPGPLIVVEIS+HPEDGL IVVSP+TRIHNESGLTMELRFRRNQPKEDECASV ++P DVIDDSM MFDALNSSGGLRKALMSL V + LL
Subjt:  AQDSRTYPGPLIVVEISQHPEDGLLIVVSPVTRIHNESGLTMELRFRRNQPKEDECASVFLKPGDVIDDSMAMFDALNSSGGLRKALMSLCVDDTLL
TrEMBL top hitse value%identityAlignment
A0A6J1BTB2 uncharacterized protein LOC111005570 isoform X32.1e-3886.6Show/hide
Query:  AQDSRTYPGPLIVVEISQHPEDGLLIVVSPVTRIHNESGLTMELRFRRNQPKEDECASVFLKPGDVIDDSMAMFDALNSSGGLRKALMSLCVDDTLL
        A+DSRTYPGPLIVVEIS+HPEDGL IVVSP+TRIHNESGLTMELRFRRNQPKEDECASV ++P DVIDDSM MFDALNSSGGLRKALMSL V + LL
Subjt:  AQDSRTYPGPLIVVEISQHPEDGLLIVVSPVTRIHNESGLTMELRFRRNQPKEDECASVFLKPGDVIDDSMAMFDALNSSGGLRKALMSLCVDDTLL
A0A6J1BU46 uncharacterized protein LOC111005570 isoform X12.1e-3886.6Show/hide
Query:  AQDSRTYPGPLIVVEISQHPEDGLLIVVSPVTRIHNESGLTMELRFRRNQPKEDECASVFLKPGDVIDDSMAMFDALNSSGGLRKALMSLCVDDTLL
        A+DSRTYPGPLIVVEIS+HPEDGL IVVSP+TRIHNESGLTMELRFRRNQPKEDECASV ++P DVIDDSM MFDALNSSGGLRKALMSL V + LL
Subjt:  AQDSRTYPGPLIVVEISQHPEDGLLIVVSPVTRIHNESGLTMELRFRRNQPKEDECASVFLKPGDVIDDSMAMFDALNSSGGLRKALMSLCVDDTLL
A0A6J1BU52 uncharacterized protein LOC111005570 isoform X62.1e-3886.6Show/hide
Query:  AQDSRTYPGPLIVVEISQHPEDGLLIVVSPVTRIHNESGLTMELRFRRNQPKEDECASVFLKPGDVIDDSMAMFDALNSSGGLRKALMSLCVDDTLL
        A+DSRTYPGPLIVVEIS+HPEDGL IVVSP+TRIHNESGLTMELRFRRNQPKEDECASV ++P DVIDDSM MFDALNSSGGLRKALMSL V + LL
Subjt:  AQDSRTYPGPLIVVEISQHPEDGLLIVVSPVTRIHNESGLTMELRFRRNQPKEDECASVFLKPGDVIDDSMAMFDALNSSGGLRKALMSLCVDDTLL
A0A6J1BUV2 uncharacterized protein LOC111005570 isoform X42.1e-3886.6Show/hide
Query:  AQDSRTYPGPLIVVEISQHPEDGLLIVVSPVTRIHNESGLTMELRFRRNQPKEDECASVFLKPGDVIDDSMAMFDALNSSGGLRKALMSLCVDDTLL
        A+DSRTYPGPLIVVEIS+HPEDGL IVVSP+TRIHNESGLTMELRFRRNQPKEDECASV ++P DVIDDSM MFDALNSSGGLRKALMSL V + LL
Subjt:  AQDSRTYPGPLIVVEISQHPEDGLLIVVSPVTRIHNESGLTMELRFRRNQPKEDECASVFLKPGDVIDDSMAMFDALNSSGGLRKALMSLCVDDTLL
A0A6J1BXC4 uncharacterized protein LOC111005570 isoform X52.1e-3886.6Show/hide
Query:  AQDSRTYPGPLIVVEISQHPEDGLLIVVSPVTRIHNESGLTMELRFRRNQPKEDECASVFLKPGDVIDDSMAMFDALNSSGGLRKALMSLCVDDTLL
        A+DSRTYPGPLIVVEIS+HPEDGL IVVSP+TRIHNESGLTMELRFRRNQPKEDECASV ++P DVIDDSM MFDALNSSGGLRKALMSL V + LL
Subjt:  AQDSRTYPGPLIVVEISQHPEDGLLIVVSPVTRIHNESGLTMELRFRRNQPKEDECASVFLKPGDVIDDSMAMFDALNSSGGLRKALMSLCVDDTLL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G50380.1 Protein of unknown function (DUF1162)2.3e-2460Show/hide
Query:  DSRTYPGPLIVVEISQHPEDGLLIVVSPVTRIHNESGLTMELRFRRNQPKEDECASVFLKPGDVIDDSMAMFDALNSSGGLRKALMSLCV
        DSR++PGP +VV+I +  EDGL I VSP+TRIHNE+ L +E+RF+R++ K DE ASV LKPG  IDDS+A F+A++SSG ++KAL SL V
Subjt:  DSRTYPGPLIVVEISQHPEDGLLIVVSPVTRIHNESGLTMELRFRRNQPKEDECASVFLKPGDVIDDSMAMFDALNSSGGLRKALMSLCV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAAAGCACAAGATTCAAGAACTTATCCAGGACCGCTCATTGTGGTTGAAATTTCTCAGCATCCTGAGGATGGTTTGTTAATTGTGGTTTCCCCTGTAACGAGAAT
ACATAATGAAAGTGGACTAACCATGGAACTTCGATTTCGACGAAACCAGCCGAAAGAAGATGAATGTGCTTCTGTGTTTCTAAAACCTGGAGATGTGATTGATGATTCAA
TGGCAATGTTTGATGCTTTAAATTCTTCTGGTGGATTGAGAAAGGCATTAATGTCTCTATGTGTTGACGATACCTTGCTGGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAAAAGCACAAGATTCAAGAACTTATCCAGGACCGCTCATTGTGGTTGAAATTTCTCAGCATCCTGAGGATGGTTTGTTAATTGTGGTTTCCCCTGTAACGAGAAT
ACATAATGAAAGTGGACTAACCATGGAACTTCGATTTCGACGAAACCAGCCGAAAGAAGATGAATGTGCTTCTGTGTTTCTAAAACCTGGAGATGTGATTGATGATTCAA
TGGCAATGTTTGATGCTTTAAATTCTTCTGGTGGATTGAGAAAGGCATTAATGTCTCTATGTGTTGACGATACCTTGCTGGTGTAG
Protein sequenceShow/hide protein sequence
MRKAQDSRTYPGPLIVVEISQHPEDGLLIVVSPVTRIHNESGLTMELRFRRNQPKEDECASVFLKPGDVIDDSMAMFDALNSSGGLRKALMSLCVDDTLLV