; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0012996 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012996
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationchr1:46473753..46475798
RNA-Seq ExpressionLag0012996
SyntenyLag0012996
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0044237 - cellular metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0050789 - regulation of biological process (biological process)
GO:0050896 - response to stimulus (biological process)
GO:0071704 - organic substance metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN68153.1 hypothetical protein VITISV_009302 [Vitis vinifera]4.3e-4130.53Show/hide
Query:  TIAENHMAFVSNRQILDVALIASELIDDWKTSNKKGVVIKLDLEKAFDKVDWDFWLRFFKLKTWRLAN------NLSWPS---FRWQFEITLILA-----
        TI     AFV  RQILDV LIA+E++D+ + S ++GVV K+D EKA+D V+ D        K+  +A+       L W S    R    + L L      
Subjt:  TIAENHMAFVSNRQILDVALIASELIDDWKTSNKKGVVIKLDLEKAFDKVDWDFWLRFFKLKTWRLAN------NLSWPS---FRWQFEITLILA-----

Query:  ---------PMIEQIQKKLHSWKYLYISKGGRYTLIQDSLSSMSIYYLSLYKLPSKVAKVLDKIIRDFFWEGSTGNGGLHNIKWETTQLPHILGRLGIGN
                 P+IE+I ++L+ W+  Y+S  GR TLIQ  L+ M  Y LSL+K+P+ +A  ++++ RDF W G   +   H I W+    P   G LG G 
Subjt:  ---------PMIEQIQKKLHSWKYLYISKGGRYTLIQDSLSSMSIYYLSLYKLPSKVAKVLDKIIRDFFWEGSTGNGGLHNIKWETTQLPHILGRLGIGN

Query:  FQLRNSAFLAKWIWSTIDIVGSRIQRRLGNGTHTSFWNDLWLAESK-----------------------------AWDLGLRRNLNEEEIQEWASLSHLL
          LRN A L KW+W  +         R GN     FW DLW                                  +W+    RNL++ EI++   L   L
Subjt:  FQLRNSAFLAKWIWSTIDIVGSRIQRRLGNGTHTSFWNDLWLAESK-----------------------------AWDLGLRRNLNEEEIQEWASLSHLL

Query:  SSV-IFRNTQDSWYWHLDPSHSFTVRSLMEDLVHSKGPTRNNLFSMIWKDCYPEKIKIFLWELSHGGINTADNFKENASFSSFSLVVCYVLCK
          + +     D+  W L PS  F+V+S    L    G  +      +WK   P K+K F+W ++H  +NT D  +    + + S  +C +  K
Subjt:  SSV-IFRNTQDSWYWHLDPSHSFTVRSLMEDLVHSKGPTRNNLFSMIWKDCYPEKIKIFLWELSHGGINTADNFKENASFSSFSLVVCYVLCK

RVW56165.1 Calcium-transporting ATPase 3, endoplasmic reticulum-type [Vitis vinifera]1.3e-4229.02Show/hide
Query:  TIAENHMAFVSNRQILDVALIASELIDDWKTSNKKGVVIKLDLEKAFDKVDWDFW---------------------LRFFKLKTWRLANNLSW-------
        TI+++  AFV  R ILD  LIA+E++D+ + S ++G+V K+D EKA+D VDW F                         F+ +   L     W       
Subjt:  TIAENHMAFVSNRQILDVALIASELIDDWKTSNKKGVVIKLDLEKAFDKVDWDFW---------------------LRFFKLKTWRLANNLSW-------

Query:  PSFRWQFEITLILAPM----------------------------------IEQIQKKLHSWKYLYISKGGRYTLIQDSLSSMSIYYLSLYKLPSKVAKVL
        P +  Q  ++  L P+                                  +E+I ++L  WK  Y+S GGR TLIQ  LS +  Y+LSL+K+P+ +A  +
Subjt:  PSFRWQFEITLILAPM----------------------------------IEQIQKKLHSWKYLYISKGGRYTLIQDSLSSMSIYYLSLYKLPSKVAKVL

Query:  DKIIRDFFWEGSTGNGGLHNIKWETTQLPHILGRLGIGNFQLRNSAFLAKWIWSTIDIVGSRIQRRL-------------GNGTHTSFWNDLWLAESKA-
        +K+ R+F W G+      H ++WE    P  LG LG G   LRN A L KW+W        R  R               G     SFW DLW       
Subjt:  DKIIRDFFWEGSTGNGGLHNIKWETTQLPHILGRLGIGNFQLRNSAFLAKWIWSTIDIVGSRIQRRL-------------GNGTHTSFWNDLWLAESKA-

Query:  ----------------------------WDLGLRRNLNEEEIQEWASLSHLLSSVIFR-NTQDSWYWHLDPSHSFTVRSLMEDLVHSKGPTRNNLF---S
                                    W+L  RRNL + EI     L   LS+V F  +  DS  W L  S  FTV+S    L     P   NLF    
Subjt:  ----------------------------WDLGLRRNLNEEEIQEWASLSHLLSSVIFR-NTQDSWYWHLDPSHSFTVRSLMEDLVHSKGPTRNNLF---S

Query:  MIWKDCYPEKIKIFLWELSHGGINTADNFKENASFSSFSLVVCYVLCK
         +W    P K+K   W ++HG +NT D  +    + S     C +LCK
Subjt:  MIWKDCYPEKIKIFLWELSHGGINTADNFKENASFSSFSLVVCYVLCK

RVW99862.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]1.7e-3729.41Show/hide
Query:  TIAENHMAFVSNRQILDVALIASELIDDWKTSNKKGVVIKLDLEKAFDKVDWDFWLRFFKLK----TWR--LANNLSWPSFR---------W--------
        TI+ +  AFV  R ILD  LIA+E++D+ + S ++G+V K+D EKA+D VDW F     + K     WR  +   LS  SF          W        
Subjt:  TIAENHMAFVSNRQILDVALIASELIDDWKTSNKKGVVIKLDLEKAFDKVDWDFWLRFFKLK----TWR--LANNLSWPSFR---------W--------

Query:  ------QFEITLIL-----------------APMIEQIQKKLHSWKYLYISKGGRYTLIQDSLSSMSIYYLSLYKLPSKVAKVLDKIIRDFFWEGSTGNG
               F  TL+                   P++E+I ++L  WK  Y+S GGR  LIQ  LS +  Y+LSL+K+P+ +A  ++K+ R+F W G+    
Subjt:  ------QFEITLIL-----------------APMIEQIQKKLHSWKYLYISKGGRYTLIQDSLSSMSIYYLSLYKLPSKVAKVLDKIIRDFFWEGSTGNG

Query:  GLHNIKWETTQLPHILGRLGIGNFQLR-NSAFLAKWI----WSTIDIVGSR----IQRRLGNGTHTSFWNDLWLAESK----------------------
          H ++WE    P  LG    G      ++  + +W     W  I  V       ++  +GNG    FW DLW                           
Subjt:  GLHNIKWETTQLPHILGRLGIGNFQLR-NSAFLAKWI----WSTIDIVGSR----IQRRLGNGTHTSFWNDLWLAESK----------------------

Query:  -------AWDLGLRRNLNEEEIQEWASLSHLLSSVIFR-NTQDSWYWHLDPSHSFTVRSLMEDLVHSKGPTRNNLFSMIWKDCYPEKIKIFLWELSHGGI
               AW+L  R NL + EI     L   LSSV F  +  DS  W L  S  F+V+S    L     P        +W    P K+K   W ++HG +
Subjt:  -------AWDLGLRRNLNEEEIQEWASLSHLLSSVIFR-NTQDSWYWHLDPSHSFTVRSLMEDLVHSKGPTRNNLFSMIWKDCYPEKIKIFLWELSHGGI

Query:  NTADNFKENASFSSFSLVVCYVLCK
        NT D  +    F S     C +LCK
Subjt:  NTADNFKENASFSSFSLVVCYVLCK

RVX17758.1 putative ribonuclease H protein [Vitis vinifera]1.2e-3531.16Show/hide
Query:  PMIEQIQKKLHSWKYLYISKGGRYTLIQDSLSSMSIYYLSLYKLPSKVAKVLDKIIRDFFWEGSTGNGGLHNIKWETTQLPHILGRLGIGNFQLRNSAFL
        P++E+I ++L  WK  Y+S GGR TLIQ  LS +  Y+LSL+K+P  +A  ++K+ RDF W G+      H I+WE    P  +G LG G   +RNSA L
Subjt:  PMIEQIQKKLHSWKYLYISKGGRYTLIQDSLSSMSIYYLSLYKLPSKVAKVLDKIIRDFFWEGSTGNGGLHNIKWETTQLPHILGRLGIGNFQLRNSAFL

Query:  AKWIWS--------TIDIVGSRIQRRLGNGTHTSFWNDLWLAESK-----------------------------AWDLGLRRNLNEEEIQEWASLSHLLS
         KW+W                 ++  +GNG    FW DLW                                  +W+   RRNL + EI     L   L+
Subjt:  AKWIWS--------TIDIVGSRIQRRLGNGTHTSFWNDLWLAESK-----------------------------AWDLGLRRNLNEEEIQEWASLSHLLS

Query:  SVIFR-NTQDSWYWHLDPSHSFTVRSLMEDLVHSKGPTRNNLFSMIWKDCYPEKIKIFLWELSHGGINTADNFKENASFSSFSLVVCYVLCK
        SV+   ++ DS  W L  S SF+V+S    L     P        +W    P K+K   W ++HG +NT D  +    + +     C +LCK
Subjt:  SVIFR-NTQDSWYWHLDPSHSFTVRSLMEDLVHSKGPTRNNLFSMIWKDCYPEKIKIFLWELSHGGINTADNFKENASFSSFSLVVCYVLCK

RVX22450.1 putative ribonuclease H protein [Vitis vinifera]1.2e-3526.29Show/hide
Query:  TIAENHMAFVSNRQILDVALIASELIDDWKTSNKKGVVIKLDLEKAFDKVDWDF----------------WLR---------------------------
        TI  +  AFV  RQILD  LIA+E++D+ + S ++GVV K+D +K +D VDW F                W+R                           
Subjt:  TIAENHMAFVSNRQILDVALIASELIDDWKTSNKKGVVIKLDLEKAFDKVDWDF----------------WLR---------------------------

Query:  --------------------------FFKLKTWRLANNL--------SWPSFRWQFEITLILA--------------PMIEQIQKKLHSWKYLYISKGGR
                                  FF   +  +  NL             +   E + I                P++E+I ++L  WK  Y+S GGR
Subjt:  --------------------------FFKLKTWRLANNL--------SWPSFRWQFEITLILA--------------PMIEQIQKKLHSWKYLYISKGGR

Query:  YTLIQDSLSSMSIYYLSLYKLPSKVAKVLDKIIRDFFWEGSTGNGGLHNIKWETTQLPHILGRLGIGNFQLRNSAFLAKWIW-----------STIDIVG
         TLIQ  L  +  Y+L+L+K+P  +A  ++K+ RDF W G+      H I+WE    P  +G LG G   +RNSA L KW+W             I  V 
Subjt:  YTLIQDSLSSMSIYYLSLYKLPSKVAKVLDKIIRDFFWEGSTGNGGLHNIKWETTQLPHILGRLGIGNFQLRNSAFLAKWIW-----------STIDIVG

Query:  SRIQRRLGNGTHTSFWNDLWLAESK-----------------------------AWDLGLRRNLNEEEIQEWASLSHLLSSVIFR-NTQDSWYWHLDPSH
          ++  + NG    FW DLW                                  +W+   RRNL + +I     L   L+SV+   ++ DS  W L  S 
Subjt:  SRIQRRLGNGTHTSFWNDLWLAESK-----------------------------AWDLGLRRNLNEEEIQEWASLSHLLSSVIFR-NTQDSWYWHLDPSH

Query:  SFTVRSLMEDLVHSKGPTRNNLFSMIWKDCYPEKIKIFLWELSHG
        SF+V+S    L     P        +W    P K+K   W ++HG
Subjt:  SFTVRSLMEDLVHSKGPTRNNLFSMIWKDCYPEKIKIFLWELSHG

TrEMBL top hitse value%identityAlignment
A0A438F829 Calcium-transporting ATPase 3, endoplasmic reticulum-type6.4e-4329.02Show/hide
Query:  TIAENHMAFVSNRQILDVALIASELIDDWKTSNKKGVVIKLDLEKAFDKVDWDFW---------------------LRFFKLKTWRLANNLSW-------
        TI+++  AFV  R ILD  LIA+E++D+ + S ++G+V K+D EKA+D VDW F                         F+ +   L     W       
Subjt:  TIAENHMAFVSNRQILDVALIASELIDDWKTSNKKGVVIKLDLEKAFDKVDWDFW---------------------LRFFKLKTWRLANNLSW-------

Query:  PSFRWQFEITLILAPM----------------------------------IEQIQKKLHSWKYLYISKGGRYTLIQDSLSSMSIYYLSLYKLPSKVAKVL
        P +  Q  ++  L P+                                  +E+I ++L  WK  Y+S GGR TLIQ  LS +  Y+LSL+K+P+ +A  +
Subjt:  PSFRWQFEITLILAPM----------------------------------IEQIQKKLHSWKYLYISKGGRYTLIQDSLSSMSIYYLSLYKLPSKVAKVL

Query:  DKIIRDFFWEGSTGNGGLHNIKWETTQLPHILGRLGIGNFQLRNSAFLAKWIWSTIDIVGSRIQRRL-------------GNGTHTSFWNDLWLAESKA-
        +K+ R+F W G+      H ++WE    P  LG LG G   LRN A L KW+W        R  R               G     SFW DLW       
Subjt:  DKIIRDFFWEGSTGNGGLHNIKWETTQLPHILGRLGIGNFQLRNSAFLAKWIWSTIDIVGSRIQRRL-------------GNGTHTSFWNDLWLAESKA-

Query:  ----------------------------WDLGLRRNLNEEEIQEWASLSHLLSSVIFR-NTQDSWYWHLDPSHSFTVRSLMEDLVHSKGPTRNNLF---S
                                    W+L  RRNL + EI     L   LS+V F  +  DS  W L  S  FTV+S    L     P   NLF    
Subjt:  ----------------------------WDLGLRRNLNEEEIQEWASLSHLLSSVIFR-NTQDSWYWHLDPSHSFTVRSLMEDLVHSKGPTRNNLF---S

Query:  MIWKDCYPEKIKIFLWELSHGGINTADNFKENASFSSFSLVVCYVLCK
         +W    P K+K   W ++HG +NT D  +    + S     C +LCK
Subjt:  MIWKDCYPEKIKIFLWELSHGGINTADNFKENASFSSFSLVVCYVLCK

A0A438IT11 Transposon TX1 uncharacterized 149 kDa protein8.1e-3829.41Show/hide
Query:  TIAENHMAFVSNRQILDVALIASELIDDWKTSNKKGVVIKLDLEKAFDKVDWDFWLRFFKLK----TWR--LANNLSWPSFR---------W--------
        TI+ +  AFV  R ILD  LIA+E++D+ + S ++G+V K+D EKA+D VDW F     + K     WR  +   LS  SF          W        
Subjt:  TIAENHMAFVSNRQILDVALIASELIDDWKTSNKKGVVIKLDLEKAFDKVDWDFWLRFFKLK----TWR--LANNLSWPSFR---------W--------

Query:  ------QFEITLIL-----------------APMIEQIQKKLHSWKYLYISKGGRYTLIQDSLSSMSIYYLSLYKLPSKVAKVLDKIIRDFFWEGSTGNG
               F  TL+                   P++E+I ++L  WK  Y+S GGR  LIQ  LS +  Y+LSL+K+P+ +A  ++K+ R+F W G+    
Subjt:  ------QFEITLIL-----------------APMIEQIQKKLHSWKYLYISKGGRYTLIQDSLSSMSIYYLSLYKLPSKVAKVLDKIIRDFFWEGSTGNG

Query:  GLHNIKWETTQLPHILGRLGIGNFQLR-NSAFLAKWI----WSTIDIVGSR----IQRRLGNGTHTSFWNDLWLAESK----------------------
          H ++WE    P  LG    G      ++  + +W     W  I  V       ++  +GNG    FW DLW                           
Subjt:  GLHNIKWETTQLPHILGRLGIGNFQLR-NSAFLAKWI----WSTIDIVGSR----IQRRLGNGTHTSFWNDLWLAESK----------------------

Query:  -------AWDLGLRRNLNEEEIQEWASLSHLLSSVIFR-NTQDSWYWHLDPSHSFTVRSLMEDLVHSKGPTRNNLFSMIWKDCYPEKIKIFLWELSHGGI
               AW+L  R NL + EI     L   LSSV F  +  DS  W L  S  F+V+S    L     P        +W    P K+K   W ++HG +
Subjt:  -------AWDLGLRRNLNEEEIQEWASLSHLLSSVIFR-NTQDSWYWHLDPSHSFTVRSLMEDLVHSKGPTRNNLFSMIWKDCYPEKIKIFLWELSHGGI

Query:  NTADNFKENASFSSFSLVVCYVLCK
        NT D  +    F S     C +LCK
Subjt:  NTADNFKENASFSSFSLVVCYVLCK

A0A438K969 Putative ribonuclease H protein5.8e-3631.16Show/hide
Query:  PMIEQIQKKLHSWKYLYISKGGRYTLIQDSLSSMSIYYLSLYKLPSKVAKVLDKIIRDFFWEGSTGNGGLHNIKWETTQLPHILGRLGIGNFQLRNSAFL
        P++E+I ++L  WK  Y+S GGR TLIQ  LS +  Y+LSL+K+P  +A  ++K+ RDF W G+      H I+WE    P  +G LG G   +RNSA L
Subjt:  PMIEQIQKKLHSWKYLYISKGGRYTLIQDSLSSMSIYYLSLYKLPSKVAKVLDKIIRDFFWEGSTGNGGLHNIKWETTQLPHILGRLGIGNFQLRNSAFL

Query:  AKWIWS--------TIDIVGSRIQRRLGNGTHTSFWNDLWLAESK-----------------------------AWDLGLRRNLNEEEIQEWASLSHLLS
         KW+W                 ++  +GNG    FW DLW                                  +W+   RRNL + EI     L   L+
Subjt:  AKWIWS--------TIDIVGSRIQRRLGNGTHTSFWNDLWLAESK-----------------------------AWDLGLRRNLNEEEIQEWASLSHLLS

Query:  SVIFR-NTQDSWYWHLDPSHSFTVRSLMEDLVHSKGPTRNNLFSMIWKDCYPEKIKIFLWELSHGGINTADNFKENASFSSFSLVVCYVLCK
        SV+   ++ DS  W L  S SF+V+S    L     P        +W    P K+K   W ++HG +NT D  +    + +     C +LCK
Subjt:  SVIFR-NTQDSWYWHLDPSHSFTVRSLMEDLVHSKGPTRNNLFSMIWKDCYPEKIKIFLWELSHGGINTADNFKENASFSSFSLVVCYVLCK

A0A438KMM1 Putative ribonuclease H protein5.8e-3626.29Show/hide
Query:  TIAENHMAFVSNRQILDVALIASELIDDWKTSNKKGVVIKLDLEKAFDKVDWDF----------------WLR---------------------------
        TI  +  AFV  RQILD  LIA+E++D+ + S ++GVV K+D +K +D VDW F                W+R                           
Subjt:  TIAENHMAFVSNRQILDVALIASELIDDWKTSNKKGVVIKLDLEKAFDKVDWDF----------------WLR---------------------------

Query:  --------------------------FFKLKTWRLANNL--------SWPSFRWQFEITLILA--------------PMIEQIQKKLHSWKYLYISKGGR
                                  FF   +  +  NL             +   E + I                P++E+I ++L  WK  Y+S GGR
Subjt:  --------------------------FFKLKTWRLANNL--------SWPSFRWQFEITLILA--------------PMIEQIQKKLHSWKYLYISKGGR

Query:  YTLIQDSLSSMSIYYLSLYKLPSKVAKVLDKIIRDFFWEGSTGNGGLHNIKWETTQLPHILGRLGIGNFQLRNSAFLAKWIW-----------STIDIVG
         TLIQ  L  +  Y+L+L+K+P  +A  ++K+ RDF W G+      H I+WE    P  +G LG G   +RNSA L KW+W             I  V 
Subjt:  YTLIQDSLSSMSIYYLSLYKLPSKVAKVLDKIIRDFFWEGSTGNGGLHNIKWETTQLPHILGRLGIGNFQLRNSAFLAKWIW-----------STIDIVG

Query:  SRIQRRLGNGTHTSFWNDLWLAESK-----------------------------AWDLGLRRNLNEEEIQEWASLSHLLSSVIFR-NTQDSWYWHLDPSH
          ++  + NG    FW DLW                                  +W+   RRNL + +I     L   L+SV+   ++ DS  W L  S 
Subjt:  SRIQRRLGNGTHTSFWNDLWLAESK-----------------------------AWDLGLRRNLNEEEIQEWASLSHLLSSVIFR-NTQDSWYWHLDPSH

Query:  SFTVRSLMEDLVHSKGPTRNNLFSMIWKDCYPEKIKIFLWELSHG
        SF+V+S    L     P        +W    P K+K   W ++HG
Subjt:  SFTVRSLMEDLVHSKGPTRNNLFSMIWKDCYPEKIKIFLWELSHG

A5BNY2 Uncharacterized protein2.1e-4130.53Show/hide
Query:  TIAENHMAFVSNRQILDVALIASELIDDWKTSNKKGVVIKLDLEKAFDKVDWDFWLRFFKLKTWRLAN------NLSWPS---FRWQFEITLILA-----
        TI     AFV  RQILDV LIA+E++D+ + S ++GVV K+D EKA+D V+ D        K+  +A+       L W S    R    + L L      
Subjt:  TIAENHMAFVSNRQILDVALIASELIDDWKTSNKKGVVIKLDLEKAFDKVDWDFWLRFFKLKTWRLAN------NLSWPS---FRWQFEITLILA-----

Query:  ---------PMIEQIQKKLHSWKYLYISKGGRYTLIQDSLSSMSIYYLSLYKLPSKVAKVLDKIIRDFFWEGSTGNGGLHNIKWETTQLPHILGRLGIGN
                 P+IE+I ++L+ W+  Y+S  GR TLIQ  L+ M  Y LSL+K+P+ +A  ++++ RDF W G   +   H I W+    P   G LG G 
Subjt:  ---------PMIEQIQKKLHSWKYLYISKGGRYTLIQDSLSSMSIYYLSLYKLPSKVAKVLDKIIRDFFWEGSTGNGGLHNIKWETTQLPHILGRLGIGN

Query:  FQLRNSAFLAKWIWSTIDIVGSRIQRRLGNGTHTSFWNDLWLAESK-----------------------------AWDLGLRRNLNEEEIQEWASLSHLL
          LRN A L KW+W  +         R GN     FW DLW                                  +W+    RNL++ EI++   L   L
Subjt:  FQLRNSAFLAKWIWSTIDIVGSRIQRRLGNGTHTSFWNDLWLAESK-----------------------------AWDLGLRRNLNEEEIQEWASLSHLL

Query:  SSV-IFRNTQDSWYWHLDPSHSFTVRSLMEDLVHSKGPTRNNLFSMIWKDCYPEKIKIFLWELSHGGINTADNFKENASFSSFSLVVCYVLCK
          + +     D+  W L PS  F+V+S    L    G  +      +WK   P K+K F+W ++H  +NT D  +    + + S  +C +  K
Subjt:  SSV-IFRNTQDSWYWHLDPSHSFTVRSLMEDLVHSKGPTRNNLFSMIWKDCYPEKIKIFLWELSHGGINTADNFKENASFSSFSLVVCYVLCK

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657504.6e-1421.24Show/hide
Query:  MIEQIQKKLHSWKYLYISKGGRYTLIQDSLSSMSIYYLSLYKLPSKVAKVLDKIIRDFFWEGSTGNGGLHNIKWETTQLPHILGRLGIGNFQLRNSAFLA
        ++E++  ++  W+   +S  GR TL +  LSSM ++ +S   LP  +   LD++ R F W  +      H +KW     P   G LG+   +  N A ++
Subjt:  MIEQIQKKLHSWKYLYISKGGRYTLIQDSLSSMSIYYLSLYKLPSKVAKVLDKIIRDFFWEGSTGNGGLHNIKWETTQLPHILGRLGIGNFQLRNSAFLA

Query:  K------------------------------WI---------WSTI-----DIVGSRIQRRLGNGTHTSFWNDLWLA-----------------------
        K                              W+         W +I     D+V   +    G+G    FW D W++                       
Subjt:  K------------------------------WI---------WSTI-----DIVGSRIQRRLGNGTHTSFWNDLWLA-----------------------

Query:  ---ESKAWDLGL--RRNLNEEEIQEWASLSHLLSSVIFRNTQDSWYWHLDPSHSFTVRSLMEDLVHSKGPTRN--NLFSMIWKDCYPEKIKIFLWELSHG
             + WD         N   ++  A +  L++       +D   W       F+VRS  E L   + P  N  + F+ +WK   PE++K FLW + + 
Subjt:  ---ESKAWDLGL--RRNLNEEEIQEWASLSHLLSSVIFRNTQDSWYWHLDPSHSFTVRSLMEDLVHSKGPTRN--NLFSMIWKDCYPEKIKIFLWELSHG

Query:  GINTAD
         + T +
Subjt:  GINTAD

Arabidopsis top hitse value%identityAlignment
AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein7.3e-1528.28Show/hide
Query:  PMIEQIQKKLHSWKYLYISKGGRYTLIQDSLSSMSIYYLSLYKLPSKVAKVLDKIIRDFFWEGSTGNGGLHNIKWETTQLPHILGRLGI--------GNF
        P++E+I+ ++  W   ++S  GR  LI   + S++ +++S ++LPS   K +D I   F W G   N     + W     P   G LGI        G+F
Subjt:  PMIEQIQKKLHSWKYLYISKGGRYTLIQDSLSSMSIYYLSLYKLPSKVAKVLDKIIRDFFWEGSTGNGGLHNIKWETTQLPHILGRLGI--------GNF

Query:  -QLRNSAFLAKWIWSTI----DIVGSRIQRRLGNGTHTSFWNDLW
          +  +  L  W+W  I     +    ++  + NG++TSFW D W
Subjt:  -QLRNSAFLAKWIWSTI----DIVGSRIQRRLGNGTHTSFWNDLW

AT4G29090.1 Ribonuclease H-like superfamily protein9.9e-0424.66Show/hide
Query:  SMSIYYLSLYKLPSKVAKVLDKIIRDFFWEGSTGNGGLHNIKWETTQLPHILGRLGIGNFQLRNSAFLAKWIW
        ++  Y ++ + LP  V K +  ++ DF+W       G+H   W+        G +G  + +  N A L K +W
Subjt:  SMSIYYLSLYKLPSKVAKVLDKIIRDFFWEGSTGNGGLHNIKWETTQLPHILGRLGIGNFQLRNSAFLAKWIW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACTTTCTCCCAACCAACATTGATTGGAGTCGAATTAGTGAAGCTCAACGACCACATTACAAGTTCCTTTCAAGGATGATGAGATTATTGCTTGTGTCTTATCGAAT
GATTAAAGCAAGTTATCTCATTACAATTGCTGAAAATCATATGGCTTTTGTGTCTAATCGTCAAATCCTGGATGTTGCATTGATTGCAAGCGAGCTGATTGATGATTGGA
AAACCTCCAATAAGAAAGGTGTGGTTATAAAGCTGGATTTAGAAAAAGCTTTTGATAAAGTTGATTGGGATTTTTGGTTGCGGTTCTTCAAATTAAAGACTTGGAGATTG
GCCAACAACTTATCTTGGCCTTCCTTTAGGTGGCAATTCGAAATTACCCTCATTTTGGCACCCATGATTGAACAAATTCAGAAAAAGCTTCATAGTTGGAAGTATTTGTA
CATTTCAAAAGGTGGTAGATATACTCTAATTCAAGATTCTTTATCCAGCATGTCCATTTATTATCTCTCTTTGTATAAATTACCTTCAAAGGTGGCTAAAGTTTTGGATA
AAATTATTCGTGATTTCTTTTGGGAAGGATCAACCGGAAATGGAGGATTACATAATATCAAATGGGAGACAACTCAACTTCCTCATATTTTGGGACGACTAGGAATTGGG
AATTTTCAGCTTCGAAATTCTGCATTTCTGGCTAAATGGATTTGGAGCACCATTGATATTGTTGGTAGTCGTATTCAGAGGAGGCTTGGAAATGGGACTCACACTTCTTT
TTGGAATGATTTGTGGCTTGCTGAATCTAAAGCTTGGGATTTAGGGCTTCGTCGAAATCTCAATGAGGAGGAAATTCAAGAATGGGCTAGTCTCTCACATCTCCTGTCAT
CAGTCATTTTCAGGAATACACAAGATTCGTGGTATTGGCATCTTGATCCCTCTCATTCATTTACAGTTCGGTCTTTGATGGAAGATTTAGTTCATTCAAAGGGTCCGACC
AGGAACAATCTCTTTTCAATGATATGGAAGGATTGTTACCCAGAAAAGATTAAAATTTTCTTATGGGAGCTTAGTCATGGTGGAATTAATACAGCAGACAACTTCAAAGA
AAATGCCTCATTTTCTTCTTTCTCCCTCGTGGTGTGTTATGTGTTGTGCAAGTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCACTTTCTCCCAACCAACATTGATTGGAGTCGAATTAGTGAAGCTCAACGACCACATTACAAGTTCCTTTCAAGGATGATGAGATTATTGCTTGTGTCTTATCGAAT
GATTAAAGCAAGTTATCTCATTACAATTGCTGAAAATCATATGGCTTTTGTGTCTAATCGTCAAATCCTGGATGTTGCATTGATTGCAAGCGAGCTGATTGATGATTGGA
AAACCTCCAATAAGAAAGGTGTGGTTATAAAGCTGGATTTAGAAAAAGCTTTTGATAAAGTTGATTGGGATTTTTGGTTGCGGTTCTTCAAATTAAAGACTTGGAGATTG
GCCAACAACTTATCTTGGCCTTCCTTTAGGTGGCAATTCGAAATTACCCTCATTTTGGCACCCATGATTGAACAAATTCAGAAAAAGCTTCATAGTTGGAAGTATTTGTA
CATTTCAAAAGGTGGTAGATATACTCTAATTCAAGATTCTTTATCCAGCATGTCCATTTATTATCTCTCTTTGTATAAATTACCTTCAAAGGTGGCTAAAGTTTTGGATA
AAATTATTCGTGATTTCTTTTGGGAAGGATCAACCGGAAATGGAGGATTACATAATATCAAATGGGAGACAACTCAACTTCCTCATATTTTGGGACGACTAGGAATTGGG
AATTTTCAGCTTCGAAATTCTGCATTTCTGGCTAAATGGATTTGGAGCACCATTGATATTGTTGGTAGTCGTATTCAGAGGAGGCTTGGAAATGGGACTCACACTTCTTT
TTGGAATGATTTGTGGCTTGCTGAATCTAAAGCTTGGGATTTAGGGCTTCGTCGAAATCTCAATGAGGAGGAAATTCAAGAATGGGCTAGTCTCTCACATCTCCTGTCAT
CAGTCATTTTCAGGAATACACAAGATTCGTGGTATTGGCATCTTGATCCCTCTCATTCATTTACAGTTCGGTCTTTGATGGAAGATTTAGTTCATTCAAAGGGTCCGACC
AGGAACAATCTCTTTTCAATGATATGGAAGGATTGTTACCCAGAAAAGATTAAAATTTTCTTATGGGAGCTTAGTCATGGTGGAATTAATACAGCAGACAACTTCAAAGA
AAATGCCTCATTTTCTTCTTTCTCCCTCGTGGTGTGTTATGTGTTGTGCAAGTGCTGA
Protein sequenceShow/hide protein sequence
MHFLPTNIDWSRISEAQRPHYKFLSRMMRLLLVSYRMIKASYLITIAENHMAFVSNRQILDVALIASELIDDWKTSNKKGVVIKLDLEKAFDKVDWDFWLRFFKLKTWRL
ANNLSWPSFRWQFEITLILAPMIEQIQKKLHSWKYLYISKGGRYTLIQDSLSSMSIYYLSLYKLPSKVAKVLDKIIRDFFWEGSTGNGGLHNIKWETTQLPHILGRLGIG
NFQLRNSAFLAKWIWSTIDIVGSRIQRRLGNGTHTSFWNDLWLAESKAWDLGLRRNLNEEEIQEWASLSHLLSSVIFRNTQDSWYWHLDPSHSFTVRSLMEDLVHSKGPT
RNNLFSMIWKDCYPEKIKIFLWELSHGGINTADNFKENASFSSFSLVVCYVLCKC