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Lag0013063 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013063
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionF-box protein
Genome locationchr1:47086435..47090507
RNA-Seq ExpressionLag0013063
SyntenyLag0013063
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599205.1 F-box protein PP2-B15, partial [Cucurbita argyrosperma subsp. sororia]5.7e-1078.72Show/hide
Query:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDI
        ILSLTTP+D GKLSLVSS FRS AESD+VW  FLPK+YA I+AASDI
Subjt:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDI

KAG6599216.1 F-box protein PP2-B15, partial [Cucurbita argyrosperma subsp. sororia]5.7e-1078.72Show/hide
Query:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDI
        ILSLTTP+D GKLSLVSS FRS AESD+VW  FLPK+YA I+AASDI
Subjt:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDI

KAG7021074.1 F-box protein PP2-B15, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-1080.85Show/hide
Query:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDI
        ILSLTTP+D GKLSL+SSAFR  AESD+VWG FLP++YARIIAASDI
Subjt:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDI

XP_022937763.1 F-box protein PP2-B15-like [Cucurbita moschata]1.1e-1080.85Show/hide
Query:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDI
        ILSLTTP+D GKLSL+SSAFR  AESD+VWG FLP++YARIIAASDI
Subjt:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDI

XP_038890670.1 F-box protein PP2-B13-like [Benincasa hispida]5.7e-1060.87Show/hide
Query:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDIVHKQLAKLEKKNEEHTLLTRPL
        ILSLT+PSD GKLSLVSS FRS AESD+VWG FLPK+Y  I+AASDI  +  + L+ K E    L  P+
Subjt:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDIVHKQLAKLEKKNEEHTLLTRPL

TrEMBL top hitse value%identityAlignment
A0A5A7U3A9 F-box protein PP2-B13-like6.1e-1059.42Show/hide
Query:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDIVHKQLAKLEKKNEEHTLLTRPL
        ILSLTTPSD GKL+LVSS FRS AESD+VWG FLP++Y  I+AAS+I  +  A L  K E    L  P+
Subjt:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDIVHKQLAKLEKKNEEHTLLTRPL

A0A6J1DQK9 F-box protein VBF-like4.7e-1076.6Show/hide
Query:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDI
        ILSLTTPSD G+LS+VSSAFRS AESD+VWG FLP +YA I+AA+DI
Subjt:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDI

A0A6J1FGV3 F-box protein PP2-B15-like5.5e-1180.85Show/hide
Query:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDI
        ILSLTTP+D GKLSL+SSAFR  AESD+VWG FLP++YARIIAASDI
Subjt:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDI

A0A6J1G450 F-box protein PP2-B15-like2.8e-1078.72Show/hide
Query:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDI
        ILSLTTP+D GKLSLVSS FRS AESD+VW  FLPK+YA I+AASDI
Subjt:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDI

A0A6J1G464 F-box protein PP2-B15-like4.7e-1078.72Show/hide
Query:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDI
        ILSLTTPSD GKLSLVSS FRS AESD+VW  FLP++YA I+AASDI
Subjt:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDI

SwissProt top hitse value%identityAlignment
O80494 F-box protein PP2-B151.2e-0550Show/hide
Query:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDIVHK
        ILS TTP+DT   + VSS FR   +SD VW  FLP DY  +I+ S   H+
Subjt:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDIVHK

Q949S5 F-box protein PP2-B117.5e-0561.36Show/hide
Query:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAA
        ILSLTTP D  +LS VSS FRS A SD VW  FLP D+    AA
Subjt:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAA

Q9C7K0 F-box protein VBF6.3e-0446.94Show/hide
Query:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDIVH
        IL+ T+P+D    S VSS FR   +SD VW  FLP DY  +I+ S   H
Subjt:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDIVH

Arabidopsis top hitse value%identityAlignment
AT1G09155.1 phloem protein 2-B158.2e-0750Show/hide
Query:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDIVHK
        ILS TTP+DT   + VSS FR   +SD VW  FLP DY  +I+ S   H+
Subjt:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDIVHK

AT1G56240.1 phloem protein 2-B131.7e-0444Show/hide
Query:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDIVHK
        IL+ T+P+D    S VSS FR   +SD VW  FLP  Y  +I+ S   H+
Subjt:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDIVHK

AT1G56250.1 phloem protein 2-B144.5e-0546.94Show/hide
Query:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDIVH
        IL+ T+P+D    S VSS FR   +SD VW  FLP DY  +I+ S   H
Subjt:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDIVH

AT1G80110.1 phloem protein 2-B115.3e-0661.36Show/hide
Query:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAA
        ILSLTTP D  +LS VSS FRS A SD VW  FLP D+    AA
Subjt:  ILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAA

AT2G02320.1 phloem protein 2-B71.0e-0430.38Show/hide
Query:  MILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDIVHKQLAKLEKKNEEHTLLTRPLNAHKSDRWM
        +I+S T+P D    +LVS  F S  +SD+VW  F+P +Y  +++ S     +        +E  L    +N  K D W+
Subjt:  MILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDIVHKQLAKLEKKNEEHTLLTRPLNAHKSDRWM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCTGTCGCTCACAACTCCCTCCGACACCGGAAAATTATCCCTCGTCTCGTCGGCCTTTCGGTCAAAGGCGGAATCCGACCTCGTTTGGGGCAGTTTTTTGCCCAA
AGACTACGCCCGGATTATCGCCGCCTCTGATATCGTCCACAAACAGCTTGCGAAGTTGGAAAAGAAAAATGAAGAGCATACCCTTTTAACAAGACCTTTGAATGCCCACA
AGAGTGATCGATGGATGCCTCCTGACGGTGACTCTTTCAAGCTAAATTTGGATGCCTCGCTATCTCTTGGCATTGCGGGATTTGTTGCATGCGATTGTCAGAAATTCTAT
CGATGTGAAACCTTGTTAGAAGCTCAACATGTCCAAAAGCTTACTGAACCCATGGAGCCCATTGAGGCCAATGCTTTACTAAGAGATATTAAGACAGCTCTTGAGTCGGG
GCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTCTGTCGCTCACAACTCCCTCCGACACCGGAAAATTATCCCTCGTCTCGTCGGCCTTTCGGTCAAAGGCGGAATCCGACCTCGTTTGGGGCAGTTTTTTGCCCAA
AGACTACGCCCGGATTATCGCCGCCTCTGATATCGTCCACAAACAGCTTGCGAAGTTGGAAAAGAAAAATGAAGAGCATACCCTTTTAACAAGACCTTTGAATGCCCACA
AGAGTGATCGATGGATGCCTCCTGACGGTGACTCTTTCAAGCTAAATTTGGATGCCTCGCTATCTCTTGGCATTGCGGGATTTGTTGCATGCGATTGTCAGAAATTCTAT
CGATGTGAAACCTTGTTAGAAGCTCAACATGTCCAAAAGCTTACTGAACCCATGGAGCCCATTGAGGCCAATGCTTTACTAAGAGATATTAAGACAGCTCTTGAGTCGGG
GCTTTGA
Protein sequenceShow/hide protein sequence
MILSLTTPSDTGKLSLVSSAFRSKAESDLVWGSFLPKDYARIIAASDIVHKQLAKLEKKNEEHTLLTRPLNAHKSDRWMPPDGDSFKLNLDASLSLGIAGFVACDCQKFY
RCETLLEAQHVQKLTEPMEPIEANALLRDIKTALESGL