; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0013076 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013076
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr1:47201954..47203056
RNA-Seq ExpressionLag0013076
SyntenyLag0013076
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
VVA38592.1 PREDICTED: reverse mRNAase, partial [Prunus dulcis]2.3e-5934.83Show/hide
Query:  MCANFWWGSLGEKTKSHWMRWQKVCKTKEAGGLGFREVSAFNQAMLAKQSWRLIRNPNSLLFKVLKGKYSKDGNFLKAPVGKNPSMTWRSLCWGRDLFEK
        M A FWWG  GE  K HWMRW+++CK K  GG+GFR + AFN AMLAKQ WRL+ NP+SL  ++LK KY    NF +A +G  PS  W+S+   R + E 
Subjt:  MCANFWWGSLGEKTKSHWMRWQKVCKTKEAGGLGFREVSAFNQAMLAKQSWRLIRNPNSLLFKVLKGKYSKDGNFLKAPVGKNPSMTWRSLCWGRDLFEK

Query:  GYRWKVGNGRYIDIGEDPWIAREGNYKPCLVP---------------------------------EILKGKNTPLGIKESRDEIIWGRDKRGLFSVKSAY
        G R+++G+G+ + I  D W+ R   +     P                                 +++     PL I+   D I+W  DK GLF+VKSAY
Subjt:  GYRWKVGNGRYIDIGEDPWIAREGNYKPCLVP---------------------------------EILKGKNTPLGIKESRDEIIWGRDKRGLFSVKSAY

Query:  KLALEQRK-ECEASSSDHSNQSKLWKCLWSLNVIPRAKACAWKILNDIVPNKANIKKRGIDTNSSCSFCRKKEEFSSHFFCECKFSKRIWLNTIPKSLTL
        ++AL     + + SSS +S+ S LW+ +W+ NV  + K  AW++ +DI+P KAN+ K+G+D    C FC    E + H    C F+   W  ++   LT 
Subjt:  KLALEQRK-ECEASSSDHSNQSKLWKCLWSLNVIPRAKACAWKILNDIVPNKANIKKRGIDTNSSCSFCRKKEEFSSHFFCECKFSKRIWLNTIPKSLTL

Query:  FNLRRDGWTPMDYWQWIVENTDKEDQIKAVITMWCIWNARNTRIHQN-QKPDHHLI
           +    T  D+ + ++E T K  +   +  +W IW  RN  + Q  Q+  H ++
Subjt:  FNLRRDGWTPMDYWQWIVENTDKEDQIKAVITMWCIWNARNTRIHQN-QKPDHHLI

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]2.8e-5734.81Show/hide
Query:  ANFWWGSLGEKTKSHWMRWQKVCKTKEAGGLGFREVSAFNQAMLAKQSWRLIRNPNSLLFKVLKGKYSKDGNFLKAPVGKNPSMTWRSLCWGRDLFEKGY
        A FWWGS  E  K HW+ W  +   K  GG+GFR++  FN+A+LAKQ WR++ +PNS+L +VLKG+Y KD +F++A +  NPS  WRS+ WGRDL +KG 
Subjt:  ANFWWGSLGEKTKSHWMRWQKVCKTKEAGGLGFREVSAFNQAMLAKQSWRLIRNPNSLLFKVLKGKYSKDGNFLKAPVGKNPSMTWRSLCWGRDLFEKGY

Query:  RWKVGNGRYIDIGEDPWIA-------------------------REGNYKPCLV-----PEILKG-KNTPLGIKESRDEIIWGRDKRGLFSVKSAYKLAL
        RW++GNG  + I  D W+                           EG ++  +V     P+  KG  + P+G     D +IW  +K G++SV+S YK+AL
Subjt:  RWKVGNGRYIDIGEDPWIA-------------------------REGNYKPCLV-----PEILKG-KNTPLGIKESRDEIIWGRDKRGLFSVKSAYKLAL

Query:  EQRKECEASSSDHSNQSKL-WKCLWSLNVIPRAKACAWKILNDIVPNKANIKKRGIDTNSSCSFCRKKEEFSSHFFCECKFSKRIWLNTIPKSLTLFNLR
              +A SS  S + +  W   W +++  + K   W++  D +P   N+ KRG++  + C FC +  E S H F  CKF++ +W+N+    L+ F + 
Subjt:  EQRKECEASSSDHSNQSKL-WKCLWSLNVIPRAKACAWKILNDIVPNKANIKKRGIDTNSSCSFCRKKEEFSSHFFCECKFSKRIWLNTIPKSLTLFNLR

Query:  RDGWTPMDYWQWIVENTDKEDQIKAVITMWCIWNARNTR
        R+            E+  K D  +  + +W +WN RN R
Subjt:  RDGWTPMDYWQWIVENTDKEDQIKAVITMWCIWNARNTR

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]2.8e-5734.99Show/hide
Query:  ANFWWGSLGEKTKSHWMRWQKVCKTKEAGGLGFREVSAFNQAMLAKQSWRLIRNPNSLLFKVLKGKYSKDGNFLKAPVGKNPSMTWRSLCWGRDLFEKGY
        A FWWGS G+K   HW +W+K+ + K  GGLGFRE S FNQA++AKQ+WRL++ PNSL+ +VL+ +Y ++ +FL A  G N S  WRS+ WGR + +KG 
Subjt:  ANFWWGSLGEKTKSHWMRWQKVCKTKEAGGLGFREVSAFNQAMLAKQSWRLIRNPNSLLFKVLKGKYSKDGNFLKAPVGKNPSMTWRSLCWGRDLFEKGY

Query:  RWKVGNGRYIDIGEDPWIAREGNYKP---------CLVPEILKGKN---------------------TPLGIKESRDEIIWGRDKRGLFSVKSAYKLALE
        RW++GNG+ I I  D W+ R   ++P          +V +++K  N                      PL  +++ DE++W  DKRG +SVKS Y+LAL 
Subjt:  RWKVGNGRYIDIGEDPWIAREGNYKP---------CLVPEILKGKN---------------------TPLGIKESRDEIIWGRDKRGLFSVKSAYKLALE

Query:  QRKECEASSSDHSNQSKLWKCLWSLNVIPRAKACAWKILNDIVPNKANIKKRGIDTNSSCSFCRKKEEFSSHFFCECKFSKRIWLNTIPKSLTLFNLRRD
         +     S ++ S+  K W  LW+L +  + K   W+  N+++P+  N+ KR +    +C  C+   E  SH   ECK +++IWL +   +  L    +D
Subjt:  QRKECEASSSDHSNQSKLWKCLWSLNVIPRAKACAWKILNDIVPNKANIKKRGIDTNSSCSFCRKKEEFSSHFFCECKFSKRIWLNTIPKSLTLFNLRRD

Query:  GWTPMDYWQWIVENTDKEDQIKAVITMWCIWNARNTRIHQNQK
         ++ +   Q + +   K D    V   W  W ARN  I   ++
Subjt:  GWTPMDYWQWIVENTDKEDQIKAVITMWCIWNARNTRIHQNQK

XP_030479238.1 uncharacterized protein LOC115696478 [Cannabis sativa]1.4e-5938.37Show/hide
Query:  MCANFWWGSLGEKTKSHWMRWQKVCKTKEAGGLGFREVSAFNQAMLAKQSWRLIRNPNSLLFKVLKGKYSKDGNFLKAPVGKNPSMTWRSLCWGRDLFEK
        + A FWWGS+G+ +K HW  W+ +C +K  GGLGFR + + NQAMLAKQ+WR++ NPNSLL  +LK KY K  NFL+A +G  PS TW SL WGRDL  +
Subjt:  MCANFWWGSLGEKTKSHWMRWQKVCKTKEAGGLGFREVSAFNQAMLAKQSWRLIRNPNSLLFKVLKGKYSKDGNFLKAPVGKNPSMTWRSLCWGRDLFEK

Query:  GYRWKVGNGRYIDIGEDPWIAREGNYKPCL----VP---------------------------EILKGKNTPLGIKESRDEIIWGRDKRGLFSVKSAYKL
        G  WKVGNG  I   +DPWI   G   PCL    +P                            +L     P+G  +  D +IW ++  G+FSVKSAY +
Subjt:  GYRWKVGNGRYIDIGEDPWIAREGNYKPCL----VP---------------------------EILKGKNTPLGIKESRDEIIWGRDKRGLFSVKSAYKL

Query:  ALEQRKECEASSSDHSNQSKLWKCLWSLNVIPRAKACAWKILNDIVPNKANIKKRGIDTNSSCSFCRKKEEFSSHFFCECKFSKRIWLNTIPKSLTLFNL
        A         SSSD S     WK LW+LNV P+ K  AW++ + I+P   N+  R      +CSFC    E  +H   +C  + +IW  +  +S  L N 
Subjt:  ALEQRKECEASSSDHSNQSKLWKCLWSLNVIPRAKACAWKILNDIVPNKANIKKRGIDTNSSCSFCRKKEEFSSHFFCECKFSKRIWLNTIPKSLTLFNL

Query:  RRDGWTPMDYWQWIVENTDKEDQIKAVITMWCIWNARNTRIHQN
          D     D+     E   K+  +  V T+W IW +RN ++  N
Subjt:  RRDGWTPMDYWQWIVENTDKEDQIKAVITMWCIWNARNTRIHQN

XP_030509046.1 uncharacterized protein LOC115723707 [Cannabis sativa]3.4e-5834.45Show/hide
Query:  MCANFWWGSLGEKTKSHWMRWQKVCKTKEAGGLGFREVSAFNQAMLAKQSWRLIRNPNSLLFKVLKGKYSKDGNFLKAPVGKNPSMTWRSLCWGRDLFEK
        M ANFWWG+  + +K HW RW+ +CK+K  GG+GFR    FNQAMLAKQ+WRL  NPNSLL ++LK +Y    +FL+A  G +PS+ W+ + WGR+L  K
Subjt:  MCANFWWGSLGEKTKSHWMRWQKVCKTKEAGGLGFREVSAFNQAMLAKQSWRLIRNPNSLLFKVLKGKYSKDGNFLKAPVGKNPSMTWRSLCWGRDLFEK

Query:  GYRWKVGNGRYIDIGEDPWIAREGNYKPCLVP-----------------------------EILKGKNTPLGIKESRDEIIWGRDKRGLFSVKSAYKLAL
        G R+K+GNG ++  G +PWI     +KP                                 +I +    PL   +S D +IW  +  G +SVKS + LA 
Subjt:  GYRWKVGNGRYIDIGEDPWIAREGNYKPCLVP-----------------------------EILKGKNTPLGIKESRDEIIWGRDKRGLFSVKSAYKLAL

Query:  EQRKECEASSSDHSNQSKLWKCLWSLNVIPRAKACAWKILNDIVPNKANIKKRGIDTNSSCSFCRKKEEFSSHFFCECKFSKRIWLNTIPKSLTLFNLRR
           ++ + SSSD  +    WK  W L++ P+ K   WK++ + +P    + KR +  ++ C+ C+   E   H    CKF+K IW NT      +     
Subjt:  EQRKECEASSSDHSNQSKLWKCLWSLNVIPRAKACAWKILNDIVPNKANIKKRGIDTNSSCSFCRKKEEFSSHFFCECKFSKRIWLNTIPKSLTLFNLRR

Query:  DGWTPMDYWQWIVENTDKEDQIKAVITMWCIWNARNTRIHQNQKPDHHLITSKILDF
         G    DY   +    DKE+    +  MW IWN RN  +H  ++ D   + S  L++
Subjt:  DGWTPMDYWQWIVENTDKEDQIKAVITMWCIWNARNTRIHQNQKPDHHLITSKILDF

TrEMBL top hitse value%identityAlignment
A0A5E4GGB8 PREDICTED: reverse mRNAase (Fragment)1.1e-5934.83Show/hide
Query:  MCANFWWGSLGEKTKSHWMRWQKVCKTKEAGGLGFREVSAFNQAMLAKQSWRLIRNPNSLLFKVLKGKYSKDGNFLKAPVGKNPSMTWRSLCWGRDLFEK
        M A FWWG  GE  K HWMRW+++CK K  GG+GFR + AFN AMLAKQ WRL+ NP+SL  ++LK KY    NF +A +G  PS  W+S+   R + E 
Subjt:  MCANFWWGSLGEKTKSHWMRWQKVCKTKEAGGLGFREVSAFNQAMLAKQSWRLIRNPNSLLFKVLKGKYSKDGNFLKAPVGKNPSMTWRSLCWGRDLFEK

Query:  GYRWKVGNGRYIDIGEDPWIAREGNYKPCLVP---------------------------------EILKGKNTPLGIKESRDEIIWGRDKRGLFSVKSAY
        G R+++G+G+ + I  D W+ R   +     P                                 +++     PL I+   D I+W  DK GLF+VKSAY
Subjt:  GYRWKVGNGRYIDIGEDPWIAREGNYKPCLVP---------------------------------EILKGKNTPLGIKESRDEIIWGRDKRGLFSVKSAY

Query:  KLALEQRK-ECEASSSDHSNQSKLWKCLWSLNVIPRAKACAWKILNDIVPNKANIKKRGIDTNSSCSFCRKKEEFSSHFFCECKFSKRIWLNTIPKSLTL
        ++AL     + + SSS +S+ S LW+ +W+ NV  + K  AW++ +DI+P KAN+ K+G+D    C FC    E + H    C F+   W  ++   LT 
Subjt:  KLALEQRK-ECEASSSDHSNQSKLWKCLWSLNVIPRAKACAWKILNDIVPNKANIKKRGIDTNSSCSFCRKKEEFSSHFFCECKFSKRIWLNTIPKSLTL

Query:  FNLRRDGWTPMDYWQWIVENTDKEDQIKAVITMWCIWNARNTRIHQN-QKPDHHLI
           +    T  D+ + ++E T K  +   +  +W IW  RN  + Q  Q+  H ++
Subjt:  FNLRRDGWTPMDYWQWIVENTDKEDQIKAVITMWCIWNARNTRIHQN-QKPDHHLI

A0A6J1DAR4 uncharacterized protein LOC1110189541.4e-5734.81Show/hide
Query:  ANFWWGSLGEKTKSHWMRWQKVCKTKEAGGLGFREVSAFNQAMLAKQSWRLIRNPNSLLFKVLKGKYSKDGNFLKAPVGKNPSMTWRSLCWGRDLFEKGY
        A FWWGS  E  K HW+ W  +   K  GG+GFR++  FN+A+LAKQ WR++ +PNS+L +VLKG+Y KD +F++A +  NPS  WRS+ WGRDL +KG 
Subjt:  ANFWWGSLGEKTKSHWMRWQKVCKTKEAGGLGFREVSAFNQAMLAKQSWRLIRNPNSLLFKVLKGKYSKDGNFLKAPVGKNPSMTWRSLCWGRDLFEKGY

Query:  RWKVGNGRYIDIGEDPWIA-------------------------REGNYKPCLV-----PEILKG-KNTPLGIKESRDEIIWGRDKRGLFSVKSAYKLAL
        RW++GNG  + I  D W+                           EG ++  +V     P+  KG  + P+G     D +IW  +K G++SV+S YK+AL
Subjt:  RWKVGNGRYIDIGEDPWIA-------------------------REGNYKPCLV-----PEILKG-KNTPLGIKESRDEIIWGRDKRGLFSVKSAYKLAL

Query:  EQRKECEASSSDHSNQSKL-WKCLWSLNVIPRAKACAWKILNDIVPNKANIKKRGIDTNSSCSFCRKKEEFSSHFFCECKFSKRIWLNTIPKSLTLFNLR
              +A SS  S + +  W   W +++  + K   W++  D +P   N+ KRG++  + C FC +  E S H F  CKF++ +W+N+    L+ F + 
Subjt:  EQRKECEASSSDHSNQSKL-WKCLWSLNVIPRAKACAWKILNDIVPNKANIKKRGIDTNSSCSFCRKKEEFSSHFFCECKFSKRIWLNTIPKSLTLFNLR

Query:  RDGWTPMDYWQWIVENTDKEDQIKAVITMWCIWNARNTR
        R+            E+  K D  +  + +W +WN RN R
Subjt:  RDGWTPMDYWQWIVENTDKEDQIKAVITMWCIWNARNTR

A0A803Q6Y1 Uncharacterized protein1.6e-5834.45Show/hide
Query:  MCANFWWGSLGEKTKSHWMRWQKVCKTKEAGGLGFREVSAFNQAMLAKQSWRLIRNPNSLLFKVLKGKYSKDGNFLKAPVGKNPSMTWRSLCWGRDLFEK
        M ANFWWG+  + +K HW RW+ +CK+K  GG+GFR    FNQAMLAKQ+WRL  NPNSLL ++LK +Y    +FL+A  G +PS+ W+ + WGR+L  K
Subjt:  MCANFWWGSLGEKTKSHWMRWQKVCKTKEAGGLGFREVSAFNQAMLAKQSWRLIRNPNSLLFKVLKGKYSKDGNFLKAPVGKNPSMTWRSLCWGRDLFEK

Query:  GYRWKVGNGRYIDIGEDPWIAREGNYKPCLVP-----------------------------EILKGKNTPLGIKESRDEIIWGRDKRGLFSVKSAYKLAL
        G R+K+GNG ++  G +PWI     +KP                                 +I +    PL   +S D +IW  +  G +SVKS + LA 
Subjt:  GYRWKVGNGRYIDIGEDPWIAREGNYKPCLVP-----------------------------EILKGKNTPLGIKESRDEIIWGRDKRGLFSVKSAYKLAL

Query:  EQRKECEASSSDHSNQSKLWKCLWSLNVIPRAKACAWKILNDIVPNKANIKKRGIDTNSSCSFCRKKEEFSSHFFCECKFSKRIWLNTIPKSLTLFNLRR
           ++ + SSSD  +    WK  W L++ P+ K   WK++ + +P    + KR +  ++ C+ C+   E   H    CKF+K IW NT      +     
Subjt:  EQRKECEASSSDHSNQSKLWKCLWSLNVIPRAKACAWKILNDIVPNKANIKKRGIDTNSSCSFCRKKEEFSSHFFCECKFSKRIWLNTIPKSLTLFNLRR

Query:  DGWTPMDYWQWIVENTDKEDQIKAVITMWCIWNARNTRIHQNQKPDHHLITSKILDF
         G    DY   +    DKE+    +  MW IWN RN  +H  ++ D   + S  L++
Subjt:  DGWTPMDYWQWIVENTDKEDQIKAVITMWCIWNARNTRIHQNQKPDHHLITSKILDF

A0A803QI38 Uncharacterized protein3.6e-5837.68Show/hide
Query:  MCANFWWGSLGEKTKSHWMRWQKVCKTKEAGGLGFREVSAFNQAMLAKQSWRLIRNPNSLLFKVLKGKYSKDGNFLKAPVGKNPSMTWRSLCWGRDLFEK
        + A FWWGS+G+ +K HW  W+ +C +K  GGLGF+ + + NQAMLAKQ+WR++ NP SLL  +LK KY K  NFL+A +G  PS TW SL WGRDL  +
Subjt:  MCANFWWGSLGEKTKSHWMRWQKVCKTKEAGGLGFREVSAFNQAMLAKQSWRLIRNPNSLLFKVLKGKYSKDGNFLKAPVGKNPSMTWRSLCWGRDLFEK

Query:  GYRWKVGNGRYIDIGEDPWI-------AREGNYKP-------------------------CLVPEILKGKNTPLGIKESRDEIIWGRDKRGLFSVKSAYK
        G  WKVGNG  I   +DPWI        R  +  P                           V  ILK    P+G  +  D +IW +D  G+FSVKSAY 
Subjt:  GYRWKVGNGRYIDIGEDPWI-------AREGNYKP-------------------------CLVPEILKGKNTPLGIKESRDEIIWGRDKRGLFSVKSAYK

Query:  LALEQRKECEASSSDHSNQSKLWKCLWSLNVIPRAKACAWKILNDIVPNKANIKKRGIDTNSSCSFCRKKEEFSSHFFCECKFSKRIWLNTIPKSLTLFN
        +A         SSSD S     WK LW+LNV P+ K  AW++ + I+P   N+  R   +  +CSFC    E  +H   +C  + +IW  +  +S  L N
Subjt:  LALEQRKECEASSSDHSNQSKLWKCLWSLNVIPRAKACAWKILNDIVPNKANIKKRGIDTNSSCSFCRKKEEFSSHFFCECKFSKRIWLNTIPKSLTLFN

Query:  LRRDGWTPMDYWQWIVENTDKEDQIKAVITMWCIWNARNTRIHQN
           D     ++     E   K+  +  V T+W IW +RN ++  N
Subjt:  LRRDGWTPMDYWQWIVENTDKEDQIKAVITMWCIWNARNTRIHQN

A0A803QQH9 Uncharacterized protein1.4e-5737.12Show/hide
Query:  MCANFWWGSLGEKTKSHWMRWQKVCKTKEAGGLGFREVSAFNQAMLAKQSWRLIRNPNSLLFKVLKGKYSKDGNFLKAPVGKNPSMTWRSLCWGRDLFEK
        M ANFWWG+    TK HW RW  +CK+K  GG+GFR    FNQA+LAKQ+WR+   P+SLL ++LK +Y    +FL A +G +PS TW+S+CWGR+L  K
Subjt:  MCANFWWGSLGEKTKSHWMRWQKVCKTKEAGGLGFREVSAFNQAMLAKQSWRLIRNPNSLLFKVLKGKYSKDGNFLKAPVGKNPSMTWRSLCWGRDLFEK

Query:  GYRWKVGNGRYIDIGEDPWIAREGNYKP--------CLVPEILKGKNT---------------------PLGIKESRDEIIWGRDKRGLFSVKSAYKLA-
        G R+KVGNG +I  G DPWI    NYKP         LV  ++  +                       PL    S D +IW     G ++VKS + LA 
Subjt:  GYRWKVGNGRYIDIGEDPWIAREGNYKP--------CLVPEILKGKNT---------------------PLGIKESRDEIIWGRDKRGLFSVKSAYKLA-

Query:  -LEQRKECEASSSDHSNQSKLWKCLWSLNVIPRAKACAWKILNDIVPNKANIKKRGIDTNSSCSFCRKKEEFSSHFFCECKFSKRIWLNTIPKSLTLFNL
         LE++  C AS S+ +     WK  WSLN+ P+ +  AWK+ ++I+P    + KR I  +++CS C    E   H   +C+ ++ IW ++  K L  FN+
Subjt:  -LEQRKECEASSSDHSNQSKLWKCLWSLNVIPRAKACAWKILNDIVPNKANIKKRGIDTNSSCSFCRKKEEFSSHFFCECKFSKRIWLNTIPKSLTLFNL

Query:  RRDGWTPMDYWQWIVENTDKEDQIKAVITMWCIWNARNTRIHQNQKPD--HHLITSKILDF
         +      DY Q++    +KED    V          +TRI   QK    H   TS   DF
Subjt:  RRDGWTPMDYWQWIVENTDKEDQIKAVITMWCIWNARNTRIHQNQKPD--HHLITSKILDF

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657501.2e-2927.19Show/hide
Query:  FWWGSLGEKTKSHWMRWQKVCKTKEAGGLGFREVSAFNQAMLAKQSWRLIRNPNSLLFKVLKGKYS----KDGNFLKAPVGKNPSMTWRSLCWG-RDLFE
        F WGS  EK K H ++W KVC  K+ GGLG R   + N+A+++K  WRL++  NSL   VL+ KY     +D  +L  P G + S TWRS+  G RD+  
Subjt:  FWWGSLGEKTKSHWMRWQKVCKTKEAGGLGFREVSAFNQAMLAKQSWRLIRNPNSLLFKVLKGKYS----KDGNFLKAPVGKNPSMTWRSLCWG-RDLFE

Query:  KGYRWKVGNGRYIDIGEDPWIA------REGNYKPCLVPEIL-------------------KGKNTPLGIKE--------SRDEIIWGRDKRGLFSVKSA
         G  W  G+G+ I    D W++       +   +P     ++                      NT L ++         +RD + W   + G FSV+SA
Subjt:  KGYRWKVGNGRYIDIGEDPWIA------REGNYKPCLVPEIL-------------------KGKNTPLGIKE--------SRDEIIWGRDKRGLFSVKSA

Query:  YKLALEQRKECEASSSDHSNQSKLWKCLWSLNVIPRAKACAWKILNDIVPNKANIKKRGIDTNSSCSFCRKKEEFSSHFFCECKFSKRIWLNTIPKSLTL
        Y++                N +  + CLW + V  R K   W + N  V  +    +R +  ++ C  C+   E   H   +C     IW+  +P+    
Subjt:  YKLALEQRKECEASSSDHSNQSKLWKCLWSLNVIPRAKACAWKILNDIVPNKANIKKRGIDTNSSCSFCRKKEEFSSHFFCECKFSKRIWLNTIPKSLTL

Query:  FNLRRDGWTPMDYWQWIVEN
           R+ G+     ++W+ +N
Subjt:  FNLRRDGWTPMDYWQWIVEN

P93295 Uncharacterized mitochondrial protein AtMg003101.0e-2543.2Show/hide
Query:  FWWGSLGEKTKSHWMRWQKVCKTKE-AGGLGFREVSAFNQAMLAKQSWRLIRNPNSLLFKVLKGKYSKDGNFLKAPVGKNPSMTWRSLCWGRDLFEKGYR
        FWW S   K K  W+ WQK+CK+KE  GGLGFR++  FNQA+LAKQS+R+I  P++LL ++L+ +Y    + ++  VG  PS  WRS+  GR+L  +G  
Subjt:  FWWGSLGEKTKSHWMRWQKVCKTKE-AGGLGFREVSAFNQAMLAKQSWRLIRNPNSLLFKVLKGKYSKDGNFLKAPVGKNPSMTWRSLCWGRDLFEKGYR

Query:  WKVGNGRYIDIGEDPWIAREGNYKP
          +G+G +  +  D WI  E    P
Subjt:  WKVGNGRYIDIGEDPWIAREGNYKP

Arabidopsis top hitse value%identityAlignment
AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.3e-0434.43Show/hide
Query:  LWSLNVIPRAKACAWKILNDIVPNKANIKKRGIDTNSSCSFCRKKEEFSSHFFCECKFSKR
        +WSL + P+ K   WK LN+ +P  A +  R I     C+ CR  E   +H    C F++R
Subjt:  LWSLNVIPRAKACAWKILNDIVPNKANIKKRGIDTNSSCSFCRKKEEFSSHFFCECKFSKR

AT4G29090.1 Ribonuclease H-like superfamily protein3.7e-3125.21Show/hide
Query:  ANFWWGSLGEKTKSHWMRWQKVCKTKEAGGLGFREVSAFNQAMLAKQSWRLIRNPNSLLFKVLKGKYSKDGNFLKAPVGKNPSMTWRSLCWGRDLFEKGY
        A+FWW +  E    HW  W  +   K  GG+GF+++ AFN A+L KQ WR++  P SL+ KV K +Y    + L AP+G  PS  W+S+   +++  +G 
Subjt:  ANFWWGSLGEKTKSHWMRWQKVCKTKEAGGLGFREVSAFNQAMLAKQSWRLIRNPNSLLFKVLKGKYSKDGNFLKAPVGKNPSMTWRSLCWGRDLFEKGY

Query:  RWKVGNGRYIDIGEDPWI--------AREGNYKP-----------------------------CLVPEI---LKGKNTPLGIKESRDEIIWGRDKRGLFS
        R  VGNG  I I    W+         R     P                              L PE+   L G+  P G +   D   W     G ++
Subjt:  RWKVGNGRYIDIGEDPWI--------AREGNYKP-----------------------------CLVPEI---LKGKNTPLGIKESRDEIIWGRDKRGLFS

Query:  VKSAYKLALE-QRKECEASSSDHSNQSKLWKCLWSLNVIPRAKACAWKILNDIVPNKANIKKRGIDTNSSCSFCRKKEEFSSHFFCECKFSKRIW-LNTI
        VKS Y +  +   K          + + +++ +W     P+ +   WK L++ +P    +  R +   S+C  C   +E  +H   +C F++  W +++I
Subjt:  VKSAYKLALE-QRKECEASSSDHSNQSKLWKCLWSLNVIPRAKACAWKILNDIVPNKANIKKRGIDTNSSCSFCRKKEEFSSHFFCECKFSKRIW-LNTI

Query:  PKSLTLFNLRRDGWTPMDYWQWIVENTDKEDQIKAVITMWCIWNARNTR
        P  + L     D      YW + + N + + +  + +  W +W     R
Subjt:  PKSLTLFNLRRDGWTPMDYWQWIVENTDKEDQIKAVITMWCIWNARNTR

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein7.3e-2743.2Show/hide
Query:  FWWGSLGEKTKSHWMRWQKVCKTKE-AGGLGFREVSAFNQAMLAKQSWRLIRNPNSLLFKVLKGKYSKDGNFLKAPVGKNPSMTWRSLCWGRDLFEKGYR
        FWW S   K K  W+ WQK+CK+KE  GGLGFR++  FNQA+LAKQS+R+I  P++LL ++L+ +Y    + ++  VG  PS  WRS+  GR+L  +G  
Subjt:  FWWGSLGEKTKSHWMRWQKVCKTKE-AGGLGFREVSAFNQAMLAKQSWRLIRNPNSLLFKVLKGKYSKDGNFLKAPVGKNPSMTWRSLCWGRDLFEKGYR

Query:  WKVGNGRYIDIGEDPWIAREGNYKP
          +G+G +  +  D WI  E    P
Subjt:  WKVGNGRYIDIGEDPWIAREGNYKP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGCAAACTTTTGGTGGGGATCGCTAGGGGAGAAGACAAAAAGTCACTGGATGAGATGGCAGAAGGTTTGTAAGACCAAGGAAGCTGGAGGCTTGGGATTTAGGGA
AGTTTCAGCCTTTAACCAAGCGATGTTGGCTAAACAAAGCTGGCGTCTCATAAGAAACCCCAATAGCCTTCTTTTTAAGGTGTTAAAAGGCAAATATTCTAAGGATGGAA
ATTTCCTCAAGGCTCCTGTGGGCAAAAACCCATCTATGACCTGGAGAAGCTTATGCTGGGGCAGAGATCTCTTTGAAAAAGGCTATAGATGGAAAGTGGGCAATGGACGA
TACATTGACATAGGAGAAGACCCGTGGATAGCCAGGGAAGGAAACTACAAGCCGTGTCTAGTTCCTGAGATTCTAAAAGGAAAAAACACCCCTTTGGGAATCAAGGAATC
CAGGGATGAAATCATATGGGGCAGGGACAAAAGAGGTCTGTTTTCTGTAAAGAGTGCTTATAAGCTGGCTCTAGAGCAGAGAAAAGAGTGTGAGGCGTCTTCTTCAGATC
ATAGCAACCAATCCAAGCTATGGAAATGTCTATGGAGTCTTAACGTAATCCCGAGGGCCAAAGCTTGTGCGTGGAAAATCCTAAACGACATTGTTCCTAACAAAGCAAAC
ATAAAAAAAAGGGGGATTGACACAAACTCTTCTTGTTCTTTTTGTAGGAAAAAGGAGGAATTTTCTAGCCACTTCTTCTGCGAATGTAAATTCTCCAAGAGGATATGGCT
TAATACTATCCCCAAATCACTAACGTTGTTTAATTTGCGCAGGGATGGCTGGACTCCTATGGATTATTGGCAGTGGATTGTAGAAAATACAGACAAAGAAGACCAAATCA
AAGCAGTGATAACAATGTGGTGTATTTGGAATGCTAGAAATACCAGAATCCACCAAAATCAGAAACCAGATCATCACCTTATAACAAGCAAGATCCTTGATTTCTCAATT
TTCTCCCACACCTGCCCTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGCAAACTTTTGGTGGGGATCGCTAGGGGAGAAGACAAAAAGTCACTGGATGAGATGGCAGAAGGTTTGTAAGACCAAGGAAGCTGGAGGCTTGGGATTTAGGGA
AGTTTCAGCCTTTAACCAAGCGATGTTGGCTAAACAAAGCTGGCGTCTCATAAGAAACCCCAATAGCCTTCTTTTTAAGGTGTTAAAAGGCAAATATTCTAAGGATGGAA
ATTTCCTCAAGGCTCCTGTGGGCAAAAACCCATCTATGACCTGGAGAAGCTTATGCTGGGGCAGAGATCTCTTTGAAAAAGGCTATAGATGGAAAGTGGGCAATGGACGA
TACATTGACATAGGAGAAGACCCGTGGATAGCCAGGGAAGGAAACTACAAGCCGTGTCTAGTTCCTGAGATTCTAAAAGGAAAAAACACCCCTTTGGGAATCAAGGAATC
CAGGGATGAAATCATATGGGGCAGGGACAAAAGAGGTCTGTTTTCTGTAAAGAGTGCTTATAAGCTGGCTCTAGAGCAGAGAAAAGAGTGTGAGGCGTCTTCTTCAGATC
ATAGCAACCAATCCAAGCTATGGAAATGTCTATGGAGTCTTAACGTAATCCCGAGGGCCAAAGCTTGTGCGTGGAAAATCCTAAACGACATTGTTCCTAACAAAGCAAAC
ATAAAAAAAAGGGGGATTGACACAAACTCTTCTTGTTCTTTTTGTAGGAAAAAGGAGGAATTTTCTAGCCACTTCTTCTGCGAATGTAAATTCTCCAAGAGGATATGGCT
TAATACTATCCCCAAATCACTAACGTTGTTTAATTTGCGCAGGGATGGCTGGACTCCTATGGATTATTGGCAGTGGATTGTAGAAAATACAGACAAAGAAGACCAAATCA
AAGCAGTGATAACAATGTGGTGTATTTGGAATGCTAGAAATACCAGAATCCACCAAAATCAGAAACCAGATCATCACCTTATAACAAGCAAGATCCTTGATTTCTCAATT
TTCTCCCACACCTGCCCTTTTTGA
Protein sequenceShow/hide protein sequence
MCANFWWGSLGEKTKSHWMRWQKVCKTKEAGGLGFREVSAFNQAMLAKQSWRLIRNPNSLLFKVLKGKYSKDGNFLKAPVGKNPSMTWRSLCWGRDLFEKGYRWKVGNGR
YIDIGEDPWIAREGNYKPCLVPEILKGKNTPLGIKESRDEIIWGRDKRGLFSVKSAYKLALEQRKECEASSSDHSNQSKLWKCLWSLNVIPRAKACAWKILNDIVPNKAN
IKKRGIDTNSSCSFCRKKEEFSSHFFCECKFSKRIWLNTIPKSLTLFNLRRDGWTPMDYWQWIVENTDKEDQIKAVITMWCIWNARNTRIHQNQKPDHHLITSKILDFSI
FSHTCPF