; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0013080 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013080
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionU1 small nuclear ribonucleoprotein A isoform X2
Genome locationchr1:47244894..47250460
RNA-Seq ExpressionLag0013080
SyntenyLag0013080
Gene Ontology termsGO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604168.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia]1.4e-16393.08Show/hide
Query:  MDDMASYYPPPPQP-PPPQPSGLEAPHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPG
        MDD+ SYY PPPQP PP QPSGLEAPHYP+   YQVPPPPSSAP SQHYLAQ PPTFASY LPFLPHAASINEVRTLFIAGLP+DVKPREIYNLFREFPG
Subjt:  MDDMASYYPPPPQP-PPPQPSGLEAPHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPG

Query:  YESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDPGLGSTHMSGMGNSA
        YESSHLRSPTQTTQPFAFAVFSDQQSA+GAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVS+FSRSTPDPGLGSTHMSGMGNSA
Subjt:  YESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDPGLGSTHMSGMGNSA

Query:  YSTIGYPSAQSHGSFDNKIVNDAVAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTILYS
        Y+TIGYPSAQSHGSFD+K VND VAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGAL+HLQG+ILYS
Subjt:  YSTIGYPSAQSHGSFDNKIVNDAVAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTILYS

Query:  SPPGEGMRLEFAKSRMDS
        SPPGEGMRLE+AKSRMDS
Subjt:  SPPGEGMRLEFAKSRMDS

XP_022133116.1 protein WHI4 [Momordica charantia]7.2e-16594.29Show/hide
Query:  MDDMASYYPPPPQPPPPQPSGLEAPHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGY
        MDDMAS+YPPPPQ PPPQPSGLEAPHYP+   YQVPPPPSSAPPSQHYLAQ PPTFA+Y LPFLPHAAS NEVRTLFIAGLPEDVKPREIYNLFREFPGY
Subjt:  MDDMASYYPPPPQPPPPQPSGLEAPHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGY

Query:  ESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDPGLGSTHMSGMGNSAY
        ESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPD GLGSTHMSGMGNSAY
Subjt:  ESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDPGLGSTHMSGMGNSAY

Query:  STIGYPSAQSHGSFDNKIVNDAVAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTILYSS
        +TIGYPSAQSHGSFDNK VND VAANVTPQNPPCPTLFVANLGPSCTEQELIQ FSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGAL+HLQG+ILYSS
Subjt:  STIGYPSAQSHGSFDNKIVNDAVAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTILYSS

Query:  PPGEGMRLEFAKSRM
        PPGEGMRLE+AKSRM
Subjt:  PPGEGMRLEFAKSRM

XP_022949757.1 protein WHI4 isoform X2 [Cucurbita moschata]2.0e-16293.04Show/hide
Query:  MDDMASYYPPPPQP-PPPQPSGLEAPHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPG
        MDD+ SYY PPPQP PP QPSGLEAPHYP+   YQVPPPPSSAP SQHYLAQ PPTFASY LPFLPHAASINEVRTLFIAGLP+DVKPREIYNLFREFPG
Subjt:  MDDMASYYPPPPQP-PPPQPSGLEAPHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPG

Query:  YESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDPGLGSTHMSGMGNSA
        YESSHLRSPTQTTQPFAFAVFSDQQSA+GAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVS+FSRSTPDPGLGSTHMSGMGNSA
Subjt:  YESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDPGLGSTHMSGMGNSA

Query:  YSTIGYPSAQSHGSFDNKIVNDAVAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTILYS
        Y+TIGYPSAQSHGSFD+K VND VAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGAL+HLQG+ILYS
Subjt:  YSTIGYPSAQSHGSFDNKIVNDAVAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTILYS

Query:  SPPGEGMRLEFAKSRM
        SPPGEGMRLE+AKSRM
Subjt:  SPPGEGMRLEFAKSRM

XP_022977593.1 protein WHI4 isoform X1 [Cucurbita maxima]4.4e-16293.04Show/hide
Query:  MDDMASYYPPPPQP-PPPQPSGLEAPHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPG
        MDD+ SYY PPPQP PP QPSGLEAPHYP+   YQVPPPPSSAP SQHYLAQ PPTFASY LPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPG
Subjt:  MDDMASYYPPPPQP-PPPQPSGLEAPHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPG

Query:  YESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDPGLGSTHMSGMGNSA
        YESSHLRSPTQTTQPFAFAVFSDQQSA+GAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKR RTEDERYGSDKKAKVS+FSR TPDPGLGSTHMSGMGNSA
Subjt:  YESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDPGLGSTHMSGMGNSA

Query:  YSTIGYPSAQSHGSFDNKIVNDAVAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTILYS
        Y+TIGYPSAQSHGSFDNK VND VAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGAL+HLQG+ILYS
Subjt:  YSTIGYPSAQSHGSFDNKIVNDAVAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTILYS

Query:  SPPGEGMRLEFAKSRM
        SPPGEGMRLE+AKSRM
Subjt:  SPPGEGMRLEFAKSRM

XP_023543723.1 protein WHI4 isoform X2 [Cucurbita pepo subsp. pepo]1.2e-16293.04Show/hide
Query:  MDDMASYYPPPPQP-PPPQPSGLEAPHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPG
        MDD+ SYY PPPQP PP QPSGLEAPHYP+   YQVPPPPSSAP SQHYLAQ PPTFASY LPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPG
Subjt:  MDDMASYYPPPPQP-PPPQPSGLEAPHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPG

Query:  YESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDPGLGSTHMSGMGNSA
        YESSHLRSPTQTTQPFAFAVFSDQQSA+GAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVS+FSRSTPDPGLGSTHMSGMGNSA
Subjt:  YESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDPGLGSTHMSGMGNSA

Query:  YSTIGYPSAQSHGSFDNKIVNDAVAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTILYS
        Y+TIGYPSAQSHGSFD+K VND VAANVTPQNPPCPTLFVANLGPSCTEQEL+QIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGAL+HLQG+ILYS
Subjt:  YSTIGYPSAQSHGSFDNKIVNDAVAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTILYS

Query:  SPPGEGMRLEFAKSRM
        SPPGEGMRLE+AKSRM
Subjt:  SPPGEGMRLEFAKSRM

TrEMBL top hitse value%identityAlignment
A0A6J1BU41 protein WHI43.5e-16594.29Show/hide
Query:  MDDMASYYPPPPQPPPPQPSGLEAPHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGY
        MDDMAS+YPPPPQ PPPQPSGLEAPHYP+   YQVPPPPSSAPPSQHYLAQ PPTFA+Y LPFLPHAAS NEVRTLFIAGLPEDVKPREIYNLFREFPGY
Subjt:  MDDMASYYPPPPQPPPPQPSGLEAPHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGY

Query:  ESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDPGLGSTHMSGMGNSAY
        ESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPD GLGSTHMSGMGNSAY
Subjt:  ESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDPGLGSTHMSGMGNSAY

Query:  STIGYPSAQSHGSFDNKIVNDAVAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTILYSS
        +TIGYPSAQSHGSFDNK VND VAANVTPQNPPCPTLFVANLGPSCTEQELIQ FSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGAL+HLQG+ILYSS
Subjt:  STIGYPSAQSHGSFDNKIVNDAVAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTILYSS

Query:  PPGEGMRLEFAKSRM
        PPGEGMRLE+AKSRM
Subjt:  PPGEGMRLEFAKSRM

A0A6J1GCW9 U1 small nuclear ribonucleoprotein A isoform X12.4e-16192.74Show/hide
Query:  MDDMASYYPPPPQP-PPPQPSGLEAPHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPG
        MDD+ SYY PPPQP PP QPSGLEAPHYP+   YQVPPPPSSAP SQHYLAQ PPTFASY LPFLPHAASINEVRTLFIAGLP+DVKPREIYNLFREFPG
Subjt:  MDDMASYYPPPPQP-PPPQPSGLEAPHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPG

Query:  YESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDP-GLGSTHMSGMGNS
        YESSHLRSPTQTTQPFAFAVFSDQQSA+GAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVS+FSRSTPDP GLGSTHMSGMGNS
Subjt:  YESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDP-GLGSTHMSGMGNS

Query:  AYSTIGYPSAQSHGSFDNKIVNDAVAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTILY
        AY+TIGYPSAQSHGSFD+K VND VAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGAL+HLQG+ILY
Subjt:  AYSTIGYPSAQSHGSFDNKIVNDAVAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTILY

Query:  SSPPGEGMRLEFAKSRM
        SSPPGEGMRLE+AKSRM
Subjt:  SSPPGEGMRLEFAKSRM

A0A6J1GD02 protein WHI4 isoform X29.6e-16393.04Show/hide
Query:  MDDMASYYPPPPQP-PPPQPSGLEAPHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPG
        MDD+ SYY PPPQP PP QPSGLEAPHYP+   YQVPPPPSSAP SQHYLAQ PPTFASY LPFLPHAASINEVRTLFIAGLP+DVKPREIYNLFREFPG
Subjt:  MDDMASYYPPPPQP-PPPQPSGLEAPHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPG

Query:  YESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDPGLGSTHMSGMGNSA
        YESSHLRSPTQTTQPFAFAVFSDQQSA+GAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVS+FSRSTPDPGLGSTHMSGMGNSA
Subjt:  YESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDPGLGSTHMSGMGNSA

Query:  YSTIGYPSAQSHGSFDNKIVNDAVAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTILYS
        Y+TIGYPSAQSHGSFD+K VND VAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGAL+HLQG+ILYS
Subjt:  YSTIGYPSAQSHGSFDNKIVNDAVAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTILYS

Query:  SPPGEGMRLEFAKSRM
        SPPGEGMRLE+AKSRM
Subjt:  SPPGEGMRLEFAKSRM

A0A6J1IMS7 U1 small nuclear ribonucleoprotein A isoform X25.2e-16192.74Show/hide
Query:  MDDMASYYPPPPQP-PPPQPSGLEAPHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPG
        MDD+ SYY PPPQP PP QPSGLEAPHYP+   YQVPPPPSSAP SQHYLAQ PPTFASY LPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPG
Subjt:  MDDMASYYPPPPQP-PPPQPSGLEAPHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPG

Query:  YESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDP-GLGSTHMSGMGNS
        YESSHLRSPTQTTQPFAFAVFSDQQSA+GAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKR RTEDERYGSDKKAKVS+FSR TPDP GLGSTHMSGMGNS
Subjt:  YESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDP-GLGSTHMSGMGNS

Query:  AYSTIGYPSAQSHGSFDNKIVNDAVAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTILY
        AY+TIGYPSAQSHGSFDNK VND VAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGAL+HLQG+ILY
Subjt:  AYSTIGYPSAQSHGSFDNKIVNDAVAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTILY

Query:  SSPPGEGMRLEFAKSRM
        SSPPGEGMRLE+AKSRM
Subjt:  SSPPGEGMRLEFAKSRM

A0A6J1IQG5 protein WHI4 isoform X12.1e-16293.04Show/hide
Query:  MDDMASYYPPPPQP-PPPQPSGLEAPHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPG
        MDD+ SYY PPPQP PP QPSGLEAPHYP+   YQVPPPPSSAP SQHYLAQ PPTFASY LPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPG
Subjt:  MDDMASYYPPPPQP-PPPQPSGLEAPHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPG

Query:  YESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDPGLGSTHMSGMGNSA
        YESSHLRSPTQTTQPFAFAVFSDQQSA+GAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKR RTEDERYGSDKKAKVS+FSR TPDPGLGSTHMSGMGNSA
Subjt:  YESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDPGLGSTHMSGMGNSA

Query:  YSTIGYPSAQSHGSFDNKIVNDAVAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTILYS
        Y+TIGYPSAQSHGSFDNK VND VAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGAL+HLQG+ILYS
Subjt:  YSTIGYPSAQSHGSFDNKIVNDAVAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTILYS

Query:  SPPGEGMRLEFAKSRM
        SPPGEGMRLE+AKSRM
Subjt:  SPPGEGMRLEFAKSRM

SwissProt top hitse value%identityAlignment
Q6DH13 RNA-binding protein, mRNA-processing factor 2a9.3e-1443.33Show/hide
Query:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTR
        EVRTLF++GLP D+KPRE+Y LFR F GYE S ++  ++  QP  F  F  +  A  A +A+NG+ FD E    L ++ AK+N++  +++
Subjt:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTR

Q6ZRY4 RNA-binding protein with multiple splicing 27.1e-1443.33Show/hide
Query:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTR
        EVRTLF++GLP D+KPRE+Y LFR F GYE S ++   +  QP  F +F  +  A  A +A+NG+ FD E    L ++ AK+N++  +++
Subjt:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTR

Q8VC52 RNA-binding protein with multiple splicing 25.4e-1443.33Show/hide
Query:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTR
        EVRTLF++GLP D+KPRE+Y LFR F GYE S ++  ++  QP  F +F  +  A  A +A+NG+ FD E    L ++ AK+N++  +++
Subjt:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTR

Q9W6I1 RNA-binding protein with multiple splicing 21.2e-1343.33Show/hide
Query:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTR
        EVRTLF++GLP D+KPRE+Y LFR F GYE S ++  ++  QP  F  F  +  A  A +A+NG+ FD E    L ++ AK+N++  +++
Subjt:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTR

Q9YGP5 RNA-binding protein with multiple splicing 21.6e-1343.33Show/hide
Query:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTR
        EVRTLF++GLP D+KPRE+Y LFR F GYE S ++  ++  QP  F  F ++  A  A +A+NG+ FD E    L ++ AK+N++  + +
Subjt:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTR

Arabidopsis top hitse value%identityAlignment
AT2G42240.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.5e-7955.89Show/hide
Query:  LEAPHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASI---NEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFA
        LEA +  +     VPPPP    P         P  +++++ +LP   SI   +EVRTLF+AGLPEDVKPREIYNLFREFPGYE+SHLRS +   +PFAFA
Subjt:  LEAPHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASI---NEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFA

Query:  VFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDPGLGSTHMSGMGNSAYSTIGYPSAQSHGSFDNKI
        VFSD QSA+  MHA+NGMVFDLEK S L++DLAKSN +SKR+RT+D   G +   K+  ++ +T + G GS    GM +SAY+TIGY  AQS G   N  
Subjt:  VFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDPGLGSTHMSGMGNSAYSTIGYPSAQSHGSFDNKI

Query:  VNDAVAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTILYSSPPGEGMRLEFAKSRM
             +   +    PCPTLF+AN+GP+CTE ELIQ+FSRC GFLKLK+Q TYG PVAFVDFQD +CS+ AL  LQGT+LYSS  GE +RL++A+SRM
Subjt:  VNDAVAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTILYSSPPGEGMRLEFAKSRM

AT2G42240.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.3e-7655.48Show/hide
Query:  LEAPHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASI---NEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFA
        LEA +  +     VPPPP    P         P  +++++ +LP   SI   +EVRTLF+AGLPEDVKPREIYNLFREFPGYE+SHLRS +   +PFAFA
Subjt:  LEAPHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASI---NEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFA

Query:  VFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDPGLGSTHMSGMGNSAYSTIGYPSAQSHGSFDNKI
        VFSD QSA+  MHA+NGMVFDLEK S L++DLAKSN +SKR+RT+D   G +   K+  ++ +T + G GS    GM +SAY+TIGY  AQS G   N  
Subjt:  VFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDPGLGSTHMSGMGNSAYSTIGYPSAQSHGSFDNKI

Query:  VNDAVAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTILYSSPPGEGMRLEF
             +   +    PCPTLF+AN+GP+CTE ELIQ+FSRC GFLKLK+Q TYG PVAFVDFQD +CS+ AL  LQGT+LYSS  GE +RL++
Subjt:  VNDAVAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTILYSSPPGEGMRLEF

AT2G42240.3 RNA-binding (RRM/RBD/RNP motifs) family protein5.1e-7655.67Show/hide
Query:  LEAPHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASI---NEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFA
        LEA +  +     VPPPP    P         P  +++++ +LP   SI   +EVRTLF+AGLPEDVKPREIYNLFREFPGYE+SHLRS +   +PFAFA
Subjt:  LEAPHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASI---NEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFA

Query:  VFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDPGLGSTHMSGMGNSAYSTIGYPSAQSHGSFDNKI
        VFSD QSA+  MHA+NGMVFDLEK S L++DLAKSN +SKR+RT+D   G +   K+  ++ +T + G GS    GM +SAY+TIGY  AQS G   N  
Subjt:  VFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDPGLGSTHMSGMGNSAYSTIGYPSAQSHGSFDNKI

Query:  VNDAVAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTILYSSPPGEGMRLE
             +   +    PCPTLF+AN+GP+CTE ELIQ+FSRC GFLKLK+Q TYG PVAFVDFQD +CS+ AL  LQGT+LYSS  GE +RL+
Subjt:  VNDAVAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTILYSSPPGEGMRLE

AT3G13700.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.9e-3033.97Show/hide
Query:  PHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR------------------
        P+ PFY  YQ+   P   PP    LA +P                   + TLF++GLP DVK REI+NLFR   G+ES  L+                  
Subjt:  PHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR------------------

Query:  SPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDPG-LGSTHMSGMGNSAYSTIGY
         P       AFA F+  + A+ AM+ +NG+ FD +  S L+++LA+SNSR K           D + K    S+S  D    G +    +     S    
Subjt:  SPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDPG-LGSTHMSGMGNSAYSTIGY

Query:  PSAQSHGSFDNKIVNDAVAANVTPQNP--------PCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTIL
         +  +    D++  + A +AN   +           C TLF+ANLGP+CTE EL Q+ SR PGF  LK+++  G PVAF DF++   +T A++HLQG +L
Subjt:  PSAQSHGSFDNKIVNDAVAANVTPQNP--------PCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTIL

Query:  YSSPPGEGMRLE
         SS  G GM +E
Subjt:  YSSPPGEGMRLE

AT3G13700.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.0e-3636.33Show/hide
Query:  PHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQ
        P+ PFY  YQ+   P   PP    LA +P                   + TLF++GLP DVK REI+NLFR   G+ES  L+   +  Q  AFA F+  +
Subjt:  PHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQ

Query:  SAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDPG-LGSTHMSGMGNSAYSTIGYPSAQSHGSFDNKIVNDAV
         A+ AM+ +NG+ FD +  S L+++LA+SNSR K           D + K    S+S  D    G +    +     S     +  +    D++  + A 
Subjt:  SAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDPG-LGSTHMSGMGNSAYSTIGYPSAQSHGSFDNKIVNDAV

Query:  AANVTPQNP--------PCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTILYSSPPGEGMRLEFAKSRM
        +AN   +           C TLF+ANLGP+CTE EL Q+ SR PGF  LK+++  G PVAF DF++   +T A++HLQG +L SS  G GM +E+A+S+M
Subjt:  AANVTPQNP--------PCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTILYSSPPGEGMRLEFAKSRM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGACATGGCTAGCTACTATCCTCCTCCACCGCAACCGCCACCGCCGCAGCCTTCTGGTCTTGAAGCTCCTCATTATCCCTTTTACCAGGACTACCAGGTGCCTCC
TCCTCCTTCTTCAGCACCGCCGTCTCAGCATTACCTCGCTCAACAGCCTCCCACCTTCGCTTCCTATGCCTTACCTTTTTTACCTCACGCAGCGTCCATCAACGAGGTCC
GAACCCTATTCATAGCTGGCCTTCCCGAAGATGTCAAGCCCCGAGAAATTTACAATCTCTTCCGGGAGTTTCCAGGATACGAGTCCTCTCATCTTCGGAGCCCCACGCAG
ACGACGCAGCCATTTGCATTTGCTGTATTCTCGGACCAGCAGTCTGCCATTGGTGCAATGCATGCAGTAAATGGCATGGTGTTTGATCTTGAGAAGCAGTCAGTTCTATA
TGTTGATTTAGCTAAATCCAATTCAAGATCTAAAAGGACAAGGACAGAGGATGAAAGATATGGATCAGATAAGAAAGCTAAAGTATCTATGTTTTCAAGGAGCACTCCTG
ATCCTGGTCTTGGCAGCACTCACATGTCTGGAATGGGTAATTCTGCTTACAGCACGATTGGTTATCCATCTGCACAAAGCCATGGAAGCTTTGATAACAAAATTGTAAAT
GATGCAGTGGCTGCAAATGTGACTCCTCAAAATCCTCCATGTCCAACACTATTTGTGGCAAATCTAGGGCCAAGTTGCACAGAGCAAGAGCTTATTCAAATTTTTTCAAG
ATGCCCGGGGTTTTTAAAGCTGAAGATGCAGAGCACGTATGGGGCCCCGGTAGCTTTTGTTGATTTTCAGGATACTGCCTGTTCAACTGGTGCACTGAGCCATCTGCAAG
GCACAATTTTGTATTCATCACCTCCTGGAGAGGGCATGCGATTGGAGTTCGCAAAATCACGAATGGATTCCACTGATTTGGATTCTCTGGTGGTCAACTTCTTCACCCAT
AATTTCTGGAGCTTCATTGGATTCTCAGCCAGAGTGCTGGCTTTAGCCATTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACGACATGGCTAGCTACTATCCTCCTCCACCGCAACCGCCACCGCCGCAGCCTTCTGGTCTTGAAGCTCCTCATTATCCCTTTTACCAGGACTACCAGGTGCCTCC
TCCTCCTTCTTCAGCACCGCCGTCTCAGCATTACCTCGCTCAACAGCCTCCCACCTTCGCTTCCTATGCCTTACCTTTTTTACCTCACGCAGCGTCCATCAACGAGGTCC
GAACCCTATTCATAGCTGGCCTTCCCGAAGATGTCAAGCCCCGAGAAATTTACAATCTCTTCCGGGAGTTTCCAGGATACGAGTCCTCTCATCTTCGGAGCCCCACGCAG
ACGACGCAGCCATTTGCATTTGCTGTATTCTCGGACCAGCAGTCTGCCATTGGTGCAATGCATGCAGTAAATGGCATGGTGTTTGATCTTGAGAAGCAGTCAGTTCTATA
TGTTGATTTAGCTAAATCCAATTCAAGATCTAAAAGGACAAGGACAGAGGATGAAAGATATGGATCAGATAAGAAAGCTAAAGTATCTATGTTTTCAAGGAGCACTCCTG
ATCCTGGTCTTGGCAGCACTCACATGTCTGGAATGGGTAATTCTGCTTACAGCACGATTGGTTATCCATCTGCACAAAGCCATGGAAGCTTTGATAACAAAATTGTAAAT
GATGCAGTGGCTGCAAATGTGACTCCTCAAAATCCTCCATGTCCAACACTATTTGTGGCAAATCTAGGGCCAAGTTGCACAGAGCAAGAGCTTATTCAAATTTTTTCAAG
ATGCCCGGGGTTTTTAAAGCTGAAGATGCAGAGCACGTATGGGGCCCCGGTAGCTTTTGTTGATTTTCAGGATACTGCCTGTTCAACTGGTGCACTGAGCCATCTGCAAG
GCACAATTTTGTATTCATCACCTCCTGGAGAGGGCATGCGATTGGAGTTCGCAAAATCACGAATGGATTCCACTGATTTGGATTCTCTGGTGGTCAACTTCTTCACCCAT
AATTTCTGGAGCTTCATTGGATTCTCAGCCAGAGTGCTGGCTTTAGCCATTCTTTAA
Protein sequenceShow/hide protein sequence
MDDMASYYPPPPQPPPPQPSGLEAPHYPFYQDYQVPPPPSSAPPSQHYLAQQPPTFASYALPFLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQ
TTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDPGLGSTHMSGMGNSAYSTIGYPSAQSHGSFDNKIVN
DAVAANVTPQNPPCPTLFVANLGPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALSHLQGTILYSSPPGEGMRLEFAKSRMDSTDLDSLVVNFFTH
NFWSFIGFSARVLALAIL