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Lag0013116 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013116
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGibberellin regulated protein
Genome locationchr1:47584326..47584728
RNA-Seq ExpressionLag0013116
SyntenyLag0013116
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647513.1 hypothetical protein Csa_002853 [Cucumis sativus]1.2e-3390Show/hide
Query:  MESASVSLVVVSLILSSFLLQYAIADSSTTYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        M+S SV+LV++SLILSSF LQYA ADSSTTYAPRVKDRCLKYCGLCCQQC CVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MESASVSLVVVSLILSSFLLQYAIADSSTTYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

KAG6595002.1 Snakin-1, partial [Cucurbita argyrosperma subsp. sororia]8.9e-3490Show/hide
Query:  MESASVSLVVVSLILSSFLLQYAIADSSTTYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        M+S S+SLV+VSL+LSSFLLQ+AIADSS TYAPRVKDRCLKYCGLCCQQC CVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MESASVSLVVVSLILSSFLLQYAIADSSTTYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

TYK12845.1 peamaclein-like [Cucumis melo var. makuwa]1.3e-3287.5Show/hide
Query:  MESASVSLVVVSLILSSFLLQYAIADSSTTYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        M+S SV+LV++S ILSSF LQY  ADSSTTYAPRVKDRCLKYCGLCCQQC CVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MESASVSLVVVSLILSSFLLQYAIADSSTTYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

XP_031742787.1 peamaclein-like isoform X1 [Cucumis sativus]2.7e-3074.74Show/hide
Query:  MESASVSLVVVSLILSSFLLQYAIADSSTTYAPR---------------VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        M+S SV+LV++SLILSSF LQYA ADSSTTYAP+               VKDRCLKYCGLCCQQC CVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MESASVSLVVVSLILSSFLLQYAIADSSTTYAPR---------------VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

XP_038880848.1 peamaclein-like [Benincasa hispida]1.1e-3178.72Show/hide
Query:  MESASVSLVVVSLILSSFLLQYAIADSSTTYAPR--------------VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        M+SASV LV++SLILSSFLLQYAIADSSTTYAP               VKDRCLKYCG+CCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MESASVSLVVVSLILSSFLLQYAIADSSTTYAPR--------------VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

TrEMBL top hitse value%identityAlignment
A0A0A0KLG3 Uncharacterized protein1.3e-3074.74Show/hide
Query:  MESASVSLVVVSLILSSFLLQYAIADSSTTYAPR---------------VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        M+S SV+LV++SLILSSF LQYA ADSSTTYAP+               VKDRCLKYCGLCCQQC CVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MESASVSLVVVSLILSSFLLQYAIADSSTTYAPR---------------VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A1S3B1M5 peamaclein-like2.4e-2973.4Show/hide
Query:  MESASVSLVVVSLILSSFLLQYAIADSSTTYAPR--------------VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        M+S SV+LV++S ILSSF LQY  ADSSTTYAP               VKDRCLKYCGLCCQQC CVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MESASVSLVVVSLILSSFLLQYAIADSSTTYAPR--------------VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A5D3CMS1 Peamaclein-like6.2e-3387.5Show/hide
Query:  MESASVSLVVVSLILSSFLLQYAIADSSTTYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        M+S SV+LV++S ILSSF LQY  ADSSTTYAPRVKDRCLKYCGLCCQQC CVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MESASVSLVVVSLILSSFLLQYAIADSSTTYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A6J1HEX9 peamaclein-like6.4e-3074.47Show/hide
Query:  MESASVSLVVVSLILSSFLLQYAIADSSTTYAPR--------------VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        M+S S+SLV+VSL+LSSFLLQ+AIADS  TYAP               VKDRCLKYCGLCCQQC CVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MESASVSLVVVSLILSSFLLQYAIADSSTTYAPR--------------VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A6J1KSF0 peamaclein-like3.2e-2973.4Show/hide
Query:  MESASVSLVVVSLILSSFLLQYAIADSSTTYAPR--------------VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        M+S S+SLV+VSLILSSFLL +AIADSS TY P               VKDRC+KYCGLCCQQC CVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MESASVSLVVVSLILSSFLLQYAIADSSTTYAPR--------------VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

SwissProt top hitse value%identityAlignment
O80641 Gibberellin-regulated protein 83.5e-1750.57Show/hide
Query:  MESASVSLVVVSLILSSFLLQYAIADSSTTYAPRVK-------DRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        M+   V   ++SL+L+S     + ADSS      V+       + CLKYC +CCQ+CNCVPSGT+G+K ECPCYRD  NSKG SKCP
Subjt:  MESASVSLVVVSLILSSFLLQYAIADSSTTYAPRVK-------DRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

O82328 Gibberellin-regulated protein 71.2e-1778.26Show/hide
Query:  VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        +KDRCLKYCG+CC+ C CVPSGTYGNK EC CYRDKL+SKG  KCP
Subjt:  VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

P86888 Peamaclein3.5e-1775.56Show/hide
Query:  KDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        ++RCLKYCG+CC++C+CVPSGTYGNK ECPCYRD  NSKG  KCP
Subjt:  KDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

Q8LFM2 Gibberellin-regulated protein 103.2e-1853.33Show/hide
Query:  MESASVSLVVVSLILSSFLLQYAIADSS---------TTYAPRVKDRCLKYCGLCCQQCN-CVPSGTYGNKSECPCYRDKLNSKGKSKCP
        M+  +V ++++SL+++S L   + ADSS          + A R +DRCLKYC +CC++CN CVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  MESASVSLVVVSLILSSFLLQYAIADSS---------TTYAPRVKDRCLKYCGLCCQQCN-CVPSGTYGNKSECPCYRDKLNSKGKSKCP

Q948Z4 Snakin-14.4e-2055.42Show/hide
Query:  VSLVVVSLILSSFLLQYAIADSS--------TTYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        ++L++V+L+++  L+Q  +A SS              + DRCLKYCG+CC++C CVPSGTYGNK ECPCYRDK NSKGKSKCP
Subjt:  VSLVVVSLILSSFLLQYAIADSS--------TTYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

Arabidopsis top hitse value%identityAlignment
AT1G10588.1 Gibberellin-regulated family protein1.5e-1852.38Show/hide
Query:  VSLVVVSLILSSFLLQYAIADSST---------TYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        V   ++SL+L+S     + ADSS          + A R  + CL+ C +CCQ+CNCVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  VSLVVVSLILSSFLLQYAIADSST---------TYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

AT1G10588.2 Gibberellin-regulated family protein1.5e-1853.01Show/hide
Query:  VSLVVVSLILSSFLLQYAIADSS--------TTYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        V   ++SL+L+S     + ADSS         + A R  + CL+ C +CCQ+CNCVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  VSLVVVSLILSSFLLQYAIADSS--------TTYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

AT2G14900.1 Gibberellin-regulated family protein8.6e-1978.26Show/hide
Query:  VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        +KDRCLKYCG+CC+ C CVPSGTYGNK EC CYRDKL+SKG  KCP
Subjt:  VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

AT2G39540.1 Gibberellin-regulated family protein2.5e-1850.57Show/hide
Query:  MESASVSLVVVSLILSSFLLQYAIADSSTTYAPRVK-------DRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        M+   V   ++SL+L+S     + ADSS      V+       + CLKYC +CCQ+CNCVPSGT+G+K ECPCYRD  NSKG SKCP
Subjt:  MESASVSLVVVSLILSSFLLQYAIADSSTTYAPRVK-------DRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

AT5G59845.1 Gibberellin-regulated family protein2.3e-1953.33Show/hide
Query:  MESASVSLVVVSLILSSFLLQYAIADSS---------TTYAPRVKDRCLKYCGLCCQQCN-CVPSGTYGNKSECPCYRDKLNSKGKSKCP
        M+  +V ++++SL+++S L   + ADSS          + A R +DRCLKYC +CC++CN CVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  MESASVSLVVVSLILSSFLLQYAIADSS---------TTYAPRVKDRCLKYCGLCCQQCN-CVPSGTYGNKSECPCYRDKLNSKGKSKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCTGCTTCAGTCAGTTTGGTTGTTGTTTCATTGATTCTGAGCTCCTTCCTCCTCCAATATGCCATTGCTGATTCCTCTACAACCTATGCTCCAAGGGTGAAGGA
CAGGTGCTTGAAGTATTGTGGACTCTGCTGCCAACAGTGCAATTGTGTGCCCTCTGGAACCTATGGAAATAAGTCGGAATGCCCTTGTTATAGAGACAAGTTGAACTCCA
AGGGAAAATCTAAATGCCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATCTGCTTCAGTCAGTTTGGTTGTTGTTTCATTGATTCTGAGCTCCTTCCTCCTCCAATATGCCATTGCTGATTCCTCTACAACCTATGCTCCAAGGGTGAAGGA
CAGGTGCTTGAAGTATTGTGGACTCTGCTGCCAACAGTGCAATTGTGTGCCCTCTGGAACCTATGGAAATAAGTCGGAATGCCCTTGTTATAGAGACAAGTTGAACTCCA
AGGGAAAATCTAAATGCCCTTGA
Protein sequenceShow/hide protein sequence
MESASVSLVVVSLILSSFLLQYAIADSSTTYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP