CuGenDBv2

Gene ID	Lag0013121
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	LINE-1 retrotransposable element ORF2 protein
Genome location	chr1:47640168..47642556
RNA-Seq Expression	Lag0013121
Synteny	Lag0013121
Gene Ontology terms	NA
InterPro domains	IPR026960 - Reverse transcriptase zinc-binding domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

BBN69274.1 TatD related DNase [Prunus dulcis]

8.0e-59

36.89

Show/hide

Query:  MPTYYLSLFKLPGKVAKTLDKLFRDFFWEGSRSDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWYRLIVAKYYNSELPSLWP
        +P+YY+SLFK+P  V   +++L R+F WEG       H + W  V      GG+GIG+ + RN AL AKW+WRF  E NSLW+R+I +K Y  +      
Subjt:  MPTYYLSLFKLPGKVAKTLDKLFRDFFWEGSRSDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWYRLIVAKYYNSELPSLWP

Query:  SIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQ----TTWDPSLRRNLNDVETEEWMA
          I K S ++PWR I+          +  +GNG    FW D WL  GIL   FPRLY L+ R    +   W A+       WD   RRNL++ E  E + 
Subjt:  SIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQ----TTWDPSLRRNLNDVETEEWMA

Query:  LSLILSSISL-QNCTDSWIWPLESSNIFSVKSLMEDLVDYPNMANDLYKVIWTDFYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAASSE
        L  IL ++ L  +  D   W +E    FS KS    L+   ++    Y+ IW    P KI+ F+W  ++G INT D +QRR P   LSPSWC+ C  ++E
Subjt:  LSLILSSISL-QNCTDSWIWPLESSNIFSVKSLMEDLVDYPNMANDLYKVIWTDFYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAASSE

Query:  HSRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDVLTLIFVDHPFRGEKK---ILWLALNRVFFW
        +  HLF+HC+++ + W  +LDA G   V P   K    L+ ++    G+ K   IL   L    FW
Subjt:  HSRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDVLTLIFVDHPFRGEKK---ILWLALNRVFFW

KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]

1.0e-61

33.98

Show/hide

Query:  MPTYYLSLFKLPGKVAKTLDKLFRDFFWEGSRSDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWYRLIVAKYYNSELPSLWP
        +P Y +S+FK+P  +A+ ++  +R+F W G+ +   +  I W  +  P   GG+GI +  + N ALL KW+W+FL E++ LW RLI++KY   ++ S +P
Subjt:  MPTYYLSLFKLPGKVAKTLDKLFRDFFWEGSRSDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWYRLIVAKYYNSELPSLWP

Query:  SIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTTWDPSLRRNLNDVETEEWMALSLI
        S  + SS+ SPW+ +T  I      +  ++ +G D SFW D+W     L+   PRL+ L+   +  V E W  S   W   + R L D E   W  +   
Subjt:  SIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTTWDPSLRRNLNDVETEEWMALSLI

Query:  LSSISLQNCTDSWIWPLESSNIFSVKSLMEDLVDYP----NMANDLYKVIWTDFYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAASSEH
        L +          +W L S+NIF   S+   + + P    N   +LYK +W   +PKK K F+W L HG INTADRLQ+R+P++ LSP+WC MC  S E 
Subjt:  LSSISLQNCTDSWIWPLESSNIFSVKSLMEDLVDYP----NMANDLYKVIWTDFYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAASSEH

Query:  SRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDVLTLIFVDHPFRGEKKILWLALNRVFFW
          HLF+HC ++ + WS+      W++  P  ++ ++  I      R +K ++    N    W
Subjt:  SRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDVLTLIFVDHPFRGEKKILWLALNRVFFW

KAA0041397.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]

1.3e-61

36.42

Show/hide

Query:  MPTYYLSLFKLPGKVAKTLDKLFRDFFWEGSRSDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWYRLIVAKYYNSELPSLWP
        +P Y LS+FK+P  +A+ ++  +R+F W G+ +   +  I W  V  P   GG+GI +  + N ALL KW+W+FL E+  LW RLI++K Y+ E    +P
Subjt:  MPTYYLSLFKLPGKVAKTLDKLFRDFFWEGSRSDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWYRLIVAKYYNSELPSLWP

Query:  SIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTTWDPSLRRNLNDVETEEWMALSLI
        S  + SS+ SPW+ +T+ I      +  ++ +G D SFW D+W     L+   PRL+ L+   +  V + W  S   W+  + R L D E   W  +   
Subjt:  SIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTTWDPSLRRNLNDVETEEWMALSLI

Query:  LSSISLQNCTDSWIWPLESSNIFSVKSLMEDLVDY----PNMANDLYKVIWTDFYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAASSEH
        L +          +W L S+NIF   S+ +DL +      N    LYK +W   +PKK K F+W L HG INTADRLQ+R+P++ LSP+WC MC  S E 
Subjt:  LSSISLQNCTDSWIWPLESSNIFSVKSLMEDLVDY----PNMANDLYKVIWTDFYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAASSEH

Query:  SRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDV
          HLF+HC ++ + WS+      W++  PN +K +
Subjt:  SRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDV

KAA0044556.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]

2.9e-61

36.42

Show/hide

Query:  MPTYYLSLFKLPGKVAKTLDKLFRDFFWEGSRSDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWYRLIVAKYYNSELPSLWP
        +P Y LS+FK+P  +A+ ++  +R+F W G+ +   +  I W  V  P   GG+GI    + N ALL KW+W+FL E+  LW RLI++K Y+ E    +P
Subjt:  MPTYYLSLFKLPGKVAKTLDKLFRDFFWEGSRSDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWYRLIVAKYYNSELPSLWP

Query:  SIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTTWDPSLRRNLNDVETEEWMALSLI
        S  + SS+ SPW+ +T+ I      +  ++ +G D SFW D+W     L+   PRL+ L+   +  V + W  S   W+  + R L D E   W  +   
Subjt:  SIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTTWDPSLRRNLNDVETEEWMALSLI

Query:  LSSISLQNCTDSWIWPLESSNIFSVKSLMEDLVDY----PNMANDLYKVIWTDFYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAASSEH
        L +          +W L S+NIF   S+ +DL +      N    LYK +W   +PKK K F+W L HG INTADRLQ+R+P++ LSP+WC MC  S E 
Subjt:  LSSISLQNCTDSWIWPLESSNIFSVKSLMEDLVDY----PNMANDLYKVIWTDFYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAASSEH

Query:  SRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDV
          HLF+HC ++ + WS+      W++  PN +K +
Subjt:  SRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDV

TQD93576.1 hypothetical protein C1H46_020784 [Malus baccata]

3.3e-57

35.71

Show/hide

Query:  MPTYYLSLFKLPGKVAKTLDKLFRDFFWEGSRSDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWYRLIVAKY--YNSELPSL
        +P YY+SLFK+P  V   L+KL + F WEG       H + W  V      GG+G+GN +NRN ALLAKW+WRF  E +SLW+++I +KY   N+   + 
Subjt:  MPTYYLSLFKLPGKVAKTLDKLFRDFFWEGSRSDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWYRLIVAKY--YNSELPSL

Query:  WPSIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGE--TWIASQTTWDPSLRRNLNDVETEEWMA
         P    + S +SPW+ I+S   L     K  +GNG    FW D WL  G L   FPRL+ L+      +     +  +  +W+   RRNLN+ E EE   
Subjt:  WPSIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGE--TWIASQTTWDPSLRRNLNDVETEEWMA

Query:  LSLILSSISL-QNCTDSWIWPLESSNIFSVKSLMEDLVDYPNMAN-DLYKVIWTDFYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAASS
        L   +  + L Q+ TD+  W LE+S +F+ KS    L +   M     Y  IW    P K+KI +W ++ G +NT D++QRR     LSP WC +C A  
Subjt:  LSLILSSISL-QNCTDSWIWPLESSNIFSVKSLMEDLVDYPNMAN-DLYKVIWTDFYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAASS

Query:  EHSRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDVLTLIFVDHPFRGEKKILWLALNRVFFW
        E   H+F+HC++  + W ++      S V P    ++L+  F       + K+LW  L    FW
Subjt:  EHSRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDVLTLIFVDHPFRGEKKILWLALNRVFFW

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein

4.9e-62

33.98

Show/hide

Query:  MPTYYLSLFKLPGKVAKTLDKLFRDFFWEGSRSDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWYRLIVAKYYNSELPSLWP
        +P Y +S+FK+P  +A+ ++  +R+F W G+ +   +  I W  +  P   GG+GI +  + N ALL KW+W+FL E++ LW RLI++KY   ++ S +P
Subjt:  MPTYYLSLFKLPGKVAKTLDKLFRDFFWEGSRSDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWYRLIVAKYYNSELPSLWP

Query:  SIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTTWDPSLRRNLNDVETEEWMALSLI
        S  + SS+ SPW+ +T  I      +  ++ +G D SFW D+W     L+   PRL+ L+   +  V E W  S   W   + R L D E   W  +   
Subjt:  SIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTTWDPSLRRNLNDVETEEWMALSLI

Query:  LSSISLQNCTDSWIWPLESSNIFSVKSLMEDLVDYP----NMANDLYKVIWTDFYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAASSEH
        L +          +W L S+NIF   S+   + + P    N   +LYK +W   +PKK K F+W L HG INTADRLQ+R+P++ LSP+WC MC  S E 
Subjt:  LSSISLQNCTDSWIWPLESSNIFSVKSLMEDLVDYP----NMANDLYKVIWTDFYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAASSEH

Query:  SRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDVLTLIFVDHPFRGEKKILWLALNRVFFW
          HLF+HC ++ + WS+      W++  P  ++ ++  I      R +K ++    N    W
Subjt:  SRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDVLTLIFVDHPFRGEKKILWLALNRVFFW

A0A5A7TIB8 LINE-1 retrotransposable element ORF2 protein

6.4e-62

36.42

Show/hide

Query:  MPTYYLSLFKLPGKVAKTLDKLFRDFFWEGSRSDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWYRLIVAKYYNSELPSLWP
        +P Y LS+FK+P  +A+ ++  +R+F W G+ +   +  I W  V  P   GG+GI +  + N ALL KW+W+FL E+  LW RLI++K Y+ E    +P
Subjt:  MPTYYLSLFKLPGKVAKTLDKLFRDFFWEGSRSDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWYRLIVAKYYNSELPSLWP

Query:  SIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTTWDPSLRRNLNDVETEEWMALSLI
        S  + SS+ SPW+ +T+ I      +  ++ +G D SFW D+W     L+   PRL+ L+   +  V + W  S   W+  + R L D E   W  +   
Subjt:  SIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTTWDPSLRRNLNDVETEEWMALSLI

Query:  LSSISLQNCTDSWIWPLESSNIFSVKSLMEDLVDY----PNMANDLYKVIWTDFYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAASSEH
        L +          +W L S+NIF   S+ +DL +      N    LYK +W   +PKK K F+W L HG INTADRLQ+R+P++ LSP+WC MC  S E 
Subjt:  LSSISLQNCTDSWIWPLESSNIFSVKSLMEDLVDY----PNMANDLYKVIWTDFYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAASSEH

Query:  SRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDV
          HLF+HC ++ + WS+      W++  PN +K +
Subjt:  SRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDV

A0A5A7TR15 LINE-1 retrotransposable element ORF2 protein

1.4e-61

36.42

Show/hide

Query:  MPTYYLSLFKLPGKVAKTLDKLFRDFFWEGSRSDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWYRLIVAKYYNSELPSLWP
        +P Y LS+FK+P  +A+ ++  +R+F W G+ +   +  I W  V  P   GG+GI    + N ALL KW+W+FL E+  LW RLI++K Y+ E    +P
Subjt:  MPTYYLSLFKLPGKVAKTLDKLFRDFFWEGSRSDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWYRLIVAKYYNSELPSLWP

Query:  SIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTTWDPSLRRNLNDVETEEWMALSLI
        S  + SS+ SPW+ +T+ I      +  ++ +G D SFW D+W     L+   PRL+ L+   +  V + W  S   W+  + R L D E   W  +   
Subjt:  SIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTTWDPSLRRNLNDVETEEWMALSLI

Query:  LSSISLQNCTDSWIWPLESSNIFSVKSLMEDLVDY----PNMANDLYKVIWTDFYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAASSEH
        L +          +W L S+NIF   S+ +DL +      N    LYK +W   +PKK K F+W L HG INTADRLQ+R+P++ LSP+WC MC  S E 
Subjt:  LSSISLQNCTDSWIWPLESSNIFSVKSLMEDLVDY----PNMANDLYKVIWTDFYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAASSEH

Query:  SRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDV
          HLF+HC ++ + WS+      W++  PN +K +
Subjt:  SRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDV

A0A5H2XQW2 TatD related DNase

3.9e-59

36.89

Show/hide

Query:  MPTYYLSLFKLPGKVAKTLDKLFRDFFWEGSRSDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWYRLIVAKYYNSELPSLWP
        +P+YY+SLFK+P  V   +++L R+F WEG       H + W  V      GG+GIG+ + RN AL AKW+WRF  E NSLW+R+I +K Y  +      
Subjt:  MPTYYLSLFKLPGKVAKTLDKLFRDFFWEGSRSDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWYRLIVAKYYNSELPSLWP

Query:  SIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQ----TTWDPSLRRNLNDVETEEWMA
          I K S ++PWR I+          +  +GNG    FW D WL  GIL   FPRLY L+ R    +   W A+       WD   RRNL++ E  E + 
Subjt:  SIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQ----TTWDPSLRRNLNDVETEEWMA

Query:  LSLILSSISL-QNCTDSWIWPLESSNIFSVKSLMEDLVDYPNMANDLYKVIWTDFYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAASSE
        L  IL ++ L  +  D   W +E    FS KS    L+   ++    Y+ IW    P KI+ F+W  ++G INT D +QRR P   LSPSWC+ C  ++E
Subjt:  LSLILSSISL-QNCTDSWIWPLESSNIFSVKSLMEDLVDYPNMANDLYKVIWTDFYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAASSE

Query:  HSRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDVLTLIFVDHPFRGEKK---ILWLALNRVFFW
        +  HLF+HC+++ + W  +LDA G   V P   K    L+ ++    G+ K   IL   L    FW
Subjt:  HSRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDVLTLIFVDHPFRGEKK---ILWLALNRVFFW

A0A803P465 Uncharacterized protein

2.5e-58

36.63

Show/hide

Query:  MPTYYLSLFKLPGKVAKTLDKLFRDFFWEGSRSDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWYRLIVAKYYNSELPSLWP
        +P Y+LSLFK P  V K L+K+ RDF WEGS S GG H + W  V  P   GG+GIG  + RN +LL KW+WRF  E+NSLW+R++V++Y  ++  +LW 
Subjt:  MPTYYLSLFKLPGKVAKTLDKLFRDFFWEGSRSDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWYRLIVAKYYNSELPSLWP

Query:  SII-QKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGET---------WIASQTTWDPSLRRNLNDVE
        S    + S K PWR I+   D     V  +LG G    FW D W+    L + FP L  +++   + + E          W+ S   W+   RRNL D E
Subjt:  SII-QKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGET---------WIASQTTWDPSLRRNLNDVE

Query:  TEEWMALSLILSSISLQNCT-DSWIWPLESSNIFSVKSLMEDLVDYPNM-ANDLYKVIWTDFYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCI
            ++L   +  + + + + DS IW  + S +FS KS    +V  P+    D  K +W    P K+K+F W L+   +N  D++Q+R P  ++SP WC+
Subjt:  TEEWMALSLILSSISLQNCT-DSWIWPLESSNIFSVKSLMEDLVDYPNM-ANDLYKVIWTDFYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCI

Query:  MCAASSEHSRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDVL
         C  S E   HLF+ C F  R W  +L  FG S V P  +  ++
Subjt:  MCAASSEHSRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDVL

SwissProt top hits

e value

%identity

Alignment

P0C2F6 Putative ribonuclease H protein At1g65750

1.5e-28

30.65

Show/hide

Query:  MPTYYLSLFKLPGKVAKTLDKLFRDFFWEGSRSDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWYRLIVAKYYNSEL-PSLW
        MP + +S   LP  +   LD+L R F W  +      H + W+ V  P   GG+G+   ++ N AL++K  WR L E+NSLW  ++  KY+  E+  S W
Subjt:  MPTYYLSLFKLPGKVAKTLDKLFRDFFWEGSRSDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWYRLIVAKYYNSEL-PSLW

Query:  PSIIQKSSHKSPWRFITSTI-DLVSSRVKRRLGNGLDTSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTTWDPSLRRNLNDVETE-EWMAL
          +I K S  S WR I   + D+VS  V    G+G    FW D W+S G          R TD    +  + WI  +  WD +         T  E  A+
Subjt:  PSIIQKSSHKSPWRFITSTI-DLVSSRVKRRLGNGLDTSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTTWDPSLRRNLNDVETE-EWMAL

Query:  SLILSSISLQNCTDSWIWPLESSNIFSVKSLME----DLVDYPNMANDLYKVIWTDFYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPS-WCIMCAA
         L L    +    D   W       FSV+S  E    D V  PNMA+  +  +W    P+++K FLW + + A+ T +   RR    HLS S  C +C  
Subjt:  SLILSSISLQNCTDSWIWPLESSNIFSVKSLME----DLVDYPNMANDLYKVIWTDFYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPS-WCIMCAA

Query:  SSEHSRHLFVHCTFASRYWSEIL
          E   H+   C      W  ++
Subjt:  SSEHSRHLFVHCTFASRYWSEIL

P93295 Uncharacterized mitochondrial protein AtMg00310

4.6e-09

27.03

Show/hide

Query:  MPTYYLSLFKLPGKVAKTLDKLFRDFFWEGSRSDGGMHNINWATV-QLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWYRLIVAKYYNSELPSLW
        +P Y +S F+L   + K L     +F+W    +   +  + W  + +     GG+G  +    N ALLAK  +R +H+ ++L  RL+ ++Y+        
Subjt:  MPTYYLSLFKLPGKVAKTLDKLFRDFFWEGSRSDGGMHNINWATV-QLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWYRLIVAKYYNSELPSLW

Query:  PSIIQKSSHKSP---WRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWL
         S+++ S    P   WR I    +L+S  + R +G+G+ T  W D W+
Subjt:  PSIIQKSSHKSP---WRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWL

Arabidopsis top hits

e value

%identity

Alignment

AT4G29090.1 Ribonuclease H-like superfamily protein

1.0e-24

28.18

Show/hide

Query:  MPTYYLSLFKLPGKVAKTLDKLFRDFFWEGSRSDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWYRLIVAKYYNSELPSLWP
        +PTY ++ F LP  V K +  +  DF+W   +   GMH   W  +      GGIG  + +  NLALL K +WR L    SL  ++  ++Y++   P   P
Subjt:  MPTYYLSLFKLPGKVAKTLDKLFRDFFWEGSRSDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWYRLIVAKYYNSELPSLWP

Query:  SIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTTWDPSLRRNLNDV------ETEEW
             S     W+ I ++ +++    +  +GNG D   W   WL     A+   R+ R+  +  + V      S    D S R    DV      E E  
Subjt:  SIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTTWDPSLRRNLNDV------ETEEW

Query:  MALSLILSSISLQNCTDSWIWPLESSNIFSVKSLMEDLVDYPN-----------MANDLYKVIWTDFYPKKIKIFLWELSHGAINTADRLQRRMPHFHLS
        +   L       +   DS+ W   SS  ++VKS    L    N             N +Y+ IW      KI+ FLW+    ++  A  L  R    HLS
Subjt:  MALSLILSSISLQNCTDSWIWPLESSNIFSVKSLMEDLVDYPN-----------MANDLYKVIWTDFYPKKIKIFLWELSHGAINTADRLQRRMPHFHLS

Query:  -PSWCIMCAASSEHSRHLFVHCTFASRYWS
          S CI C +  E   HL   CTFA   W+
Subjt:  -PSWCIMCAASSEHSRHLFVHCTFASRYWS

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

3.3e-10

27.03

Show/hide

Query:  MPTYYLSLFKLPGKVAKTLDKLFRDFFWEGSRSDGGMHNINWATV-QLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWYRLIVAKYYNSELPSLW
        +P Y +S F+L   + K L     +F+W    +   +  + W  + +     GG+G  +    N ALLAK  +R +H+ ++L  RL+ ++Y+        
Subjt:  MPTYYLSLFKLPGKVAKTLDKLFRDFFWEGSRSDGGMHNINWATV-QLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWYRLIVAKYYNSELPSLW

Query:  PSIIQKSSHKSP---WRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWL
         S+++ S    P   WR I    +L+S  + R +G+G+ T  W D W+
Subjt:  PSIIQKSSHKSP---WRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCCAACATATTATCTATCCTTATTCAAACTGCCGGGAAAGGTTGCAAAAACTCTTGATAAGTTGTTTCGTGATTTCTTTTGGGAGGGATCTAGAAGTGATGGTGGTAT
GCACAATATTAACTGGGCAACAGTACAACTTCCACATTTGATGGGGGGTATTGGTATTGGTAACTTTCAAAATCGCAATCTTGCTCTTCTTGCAAAGTGGATTTGGAGAT
TTTTACACGAGGAAAATTCTCTATGGTATAGGCTGATTGTAGCTAAATATTATAACTCTGAGTTGCCTAGTCTTTGGCCTAGCATTATTCAAAAAAGTTCTCACAAATCT
CCTTGGCGATTCATTACGTCTACTATTGACCTTGTATCTTCACGTGTTAAAAGAAGGTTGGGTAATGGTCTTGATACTTCTTTCTGGCATGATTCATGGTTAAGTTGTGG
TATTCTGGCTACAAATTTTCCTCGCCTTTATCGTTTAACAGATCGTCCGAGGAGTTTGGTTGGTGAAACATGGATTGCTTCTCAAACAACATGGGATCCGAGTCTTCGGC
GTAATTTAAATGATGTAGAGACAGAGGAATGGATGGCTTTATCACTTATTCTTTCCTCCATCAGCTTACAGAACTGTACTGATTCCTGGATTTGGCCTTTGGAATCGTCC
AATATTTTTTCTGTTAAATCTCTCATGGAAGACTTAGTAGACTATCCGAATATGGCAAATGATCTATATAAGGTCATTTGGACAGATTTTTATCCAAAGAAGATCAAGAT
TTTTTTATGGGAGCTTAGTCATGGTGCTATTAATACTGCTGATCGACTTCAACGACGAATGCCTCATTTTCATTTGTCTCCATCTTGGTGCATAATGTGTGCTGCTAGTT
CAGAACATTCTAGGCATCTATTTGTTCACTGTACCTTCGCATCCAGATATTGGTCAGAGATTCTAGATGCTTTTGGATGGTCCACCGTTTTTCCAAATTGCATTAAAGAT
GTTCTTACTCTCATTTTTGTGGATCATCCATTTCGTGGAGAAAAGAAGATCTTGTGGCTTGCTTTGAACAGAGTTTTCTTCTGGCTGGCGGTGGCTGGTTTACTTATTGA
ATTCAGCCCTGTGGTGGAATGCTTGAAGTGCTCTTTATTGGATACAGGAGTTTTTAGATTTTTTGGCCGAATTCATTTCTGTAGCCTCCAATGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MPTYYLSLFKLPGKVAKTLDKLFRDFFWEGSRSDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWYRLIVAKYYNSELPSLWPSIIQKSSHKS
PWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTTWDPSLRRNLNDVETEEWMALSLILSSISLQNCTDSWIWPLESS
NIFSVKSLMEDLVDYPNMANDLYKVIWTDFYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAASSEHSRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKD
VLTLIFVDHPFRGEKKILWLALNRVFFWLAVAGLLIEFSPVVECLKCSLLDTGVFRFFGRIHFCSLQ

Lag0013121 (gene) of Sponge gourd (AG-4) v1 genome