| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0048297.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 8.3e-141 | 54.19 | Show/hide |
Query: DMNKENHWFPDSGASNHVTNDPSNLSFGAEYQGDNKVHIDNGAGLHIQTIGSSFLKTPSNTI----FHLKNLLHVPHITKNLISVSQFAKDNCVFFEFHP
D+N +++W+PDSGA+NH+T+ SNLS G+EY G N+++ NG+GL I GS + S+T+ F L NLL VP ITKNLISVSQFAKDN VFFEFHP
Subjt: DMNKENHWFPDSGASNHVTNDPSNLSFGAEYQGDNKVHIDNGAGLHIQTIGSSFLKTPSNTI----FHLKNLLHVPHITKNLISVSQFAKDNCVFFEFHP
Query: SVCFVKDLTTGQTLLQGKLVDGLYQFTLEKVAPSSTFISDGSLSPVISSQVFHTHLPSVLNTCNTSNNTSLDLWHNRLGHYAISTVKHILS-LCNIPSSN
++C+VKDL TGQ LLQG L DGLY+FT+E PS + + + + VF+T +P SN LDLWH RLGH + VK +L+ + N +
Subjt: SVCFVKDLTTGQTLLQGKLVDGLYQFTLEKVAPSSTFISDGSLSPVISSQVFHTHLPSVLNTCNTSNNTSLDLWHNRLGHYAISTVKHILS-LCNIPSSN
Query: KNTHLCHAFAVSKCHNLPFTPSSTIYDAPLQLVVADVWGPSYKTSRNNIRFYISFVDVYSRYTWIYFLNSKAEAFQAFLLFKTHVEKFFGRSILRLQTDS
+ C A A+ K H LPF+ S T+Y PLQL+ D+WGP+ S N R+YISFVD YSRYTWIYFLNSK++AF AF FKT VEK G+SI LQTD
Subjt: KNTHLCHAFAVSKCHNLPFTPSSTIYDAPLQLVVADVWGPSYKTSRNNIRFYISFVDVYSRYTWIYFLNSKAEAFQAFLLFKTHVEKFFGRSILRLQTDS
Query: GGEFRSFIPFLKTNGIEHRLTCPYTSQQNGIVERKHRHIMDMGLTLLSHASLSLELWDDAFSTAVYIINKLPTKVHTHFISPLEKLFCVKPDYTFMKTFG
G EF+ F PFL +GIEHR+TCPYTS+QN IVERKHR+IM+MGLTLLS A+L L WD+AFST+VY+IN+LPT V + ISPLEKLFC KP++ ++ FG
Subjt: GGEFRSFIPFLKTNGIEHRLTCPYTSQQNGIVERKHRHIMDMGLTLLSHASLSLELWDDAFSTAVYIINKLPTKVHTHFISPLEKLFCVKPDYTFMKTFG
Query: CLCYPSLRSYNNHKLDPRSTPCIFLGYNSLHKGYKCLSSFGRLYISRHVIFDECAFPTSVFISPSDTDSSVQVQN-PLQTISLSTRPLSNAQDIPTSQTT
C CYP LR Y +HKL RSTPC FLGY++ HKGYKCL+S GRL+ISRHV+FDE +FP + F S S T S V + PL +I S+ N T +
Subjt: CLCYPSLRSYNNHKLDPRSTPCIFLGYNSLHKGYKCLSSFGRLYISRHVIFDECAFPTSVFISPSDTDSSVQVQN-PLQTISLSTRPLSNAQDIPTSQTT
Query: AVDPSVSPTPTVP
++PT P
Subjt: AVDPSVSPTPTVP
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| KZV26181.1 hypothetical protein F511_06348 [Dorcoceras hygrometricum] | 2.2e-125 | 54.14 | Show/hide |
Query: ENHWFPDSGASNHVTNDPSNLSFGAEYQGDNKVHIDNGAGLHIQTIGSSFLKT-PSNTIFHLKNLLHVPHITKNLISVSQFAKDNCVFFEFHPSVCFVKD
E W+PDSGAS+HVTND NLS +EY G +KV + NGAGL I IG S L PS+ F LKNLLHVP ITKNLISVS+FA DN V+FEFHPS C VKD
Subjt: ENHWFPDSGASNHVTNDPSNLSFGAEYQGDNKVHIDNGAGLHIQTIGSSFLKT-PSNTIFHLKNLLHVPHITKNLISVSQFAKDNCVFFEFHPSVCFVKD
Query: LTTGQTLLQGKLVDGLYQFTLEKVAPSSTFISDGSLSPV-ISSQVFHTHLPSVLNTCNTSNNTSLDLWHNRLGHYAISTVKHILSLCNIP-SSNKNTHLC
T LL+G L +GLY+F L+ + IS SP + S V +P C N +LD WH RLGH +I+TVK +L CN S N N C
Subjt: LTTGQTLLQGKLVDGLYQFTLEKVAPSSTFISDGSLSPV-ISSQVFHTHLPSVLNTCNTSNNTSLDLWHNRLGHYAISTVKHILSLCNIP-SSNKNTHLC
Query: HAFAVSKCHNLPFTPSSTIYDAPLQLVVADVWGPSYKTSRNNIRFYISFVDVYSRYTWIYFLNSKAEAFQAFLLFKTHVEKFFGRSILRLQTDSGGEFRS
+ + K H LPF S+T + AP ++V +D+WGP++ SRN R+YISFVD Y+RYTWIYFL K+E Q F+ F+ + E F I LQTD GGEFRS
Subjt: HAFAVSKCHNLPFTPSSTIYDAPLQLVVADVWGPSYKTSRNNIRFYISFVDVYSRYTWIYFLNSKAEAFQAFLLFKTHVEKFFGRSILRLQTDSGGEFRS
Query: FIPFLKTNGIEHRLTCPYTSQQNGIVERKHRHIMDMGLTLLSHASLSLELWDDAFSTAVYIINKLPTKVHTHFISPLEKLFCVKPDYTFMKTFGCLCYPS
+ ++NGI HR +CPYTS+QNG+VERKHRH++D GL+LL+HASL E W+DAF +AVY+IN+LP+ SP L+ +PDY+ ++ FGCLC+P
Subjt: FIPFLKTNGIEHRLTCPYTSQQNGIVERKHRHIMDMGLTLLSHASLSLELWDDAFSTAVYIINKLPTKVHTHFISPLEKLFCVKPDYTFMKTFGCLCYPS
Query: LRSYNNHKLDPRSTPCIFLGYNSLHKGYKCLSSFGRLYISRHVIFDE
LR YN HKL RSTPC FLGY+ HKGYKCL S GR+YISRHV F+E
Subjt: LRSYNNHKLDPRSTPCIFLGYNSLHKGYKCLSSFGRLYISRHVIFDE
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| RVW44519.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 2.1e-128 | 49.9 | Show/hide |
Query: WFPDSGASNHVTNDPSNLSFGAEYQGDNKVHIDNGAGLHIQTIGSSFLKTPS--NTIFHLKNLLHVPHITKNLISVSQFAKDNCVFFEFHPSVCFVKDLT
WFPDSGA+NHVT+D NL+ GAEY G++K+H+ NG GL I IG S + S N + LKN+L VP I KNL+SVSQFA+DN V+FEFHP VCFVKD +
Subjt: WFPDSGASNHVTNDPSNLSFGAEYQGDNKVHIDNGAGLHIQTIGSSFLKTPS--NTIFHLKNLLHVPHITKNLISVSQFAKDNCVFFEFHPSVCFVKDLT
Query: TGQTLLQGKLVDGLYQFTLEK----VAPSSTFISDGSLSPVISSQVFHTHLPSVLNTCNTSNNTSLDLWHNRLGHYAISTVKHILSLCNIPSSNKN-THL
LLQG L GLYQF L K A + +D + ++ + H N+S + DLWH RLGH A V +L+ IP S K+ + +
Subjt: TGQTLLQGKLVDGLYQFTLEK----VAPSSTFISDGSLSPVISSQVFHTHLPSVLNTCNTSNNTSLDLWHNRLGHYAISTVKHILSLCNIPSSNKN-THL
Query: CHAFAVSKCHNLPFTPSSTIYDAPLQLVVADVWGPSYKTSRNNIRFYISFVDVYSRYTWIYFLNSKAEAFQAFLLFKTHVEKFFGRSILRLQTDSGGEFR
C A + K HNLPF S T+Y PLQLVV+D+WGP+ S +Y+SFVD YSRYTW+YFL +K++ +AFL+FK E FG + QTD GGEFR
Subjt: CHAFAVSKCHNLPFTPSSTIYDAPLQLVVADVWGPSYKTSRNNIRFYISFVDVYSRYTWIYFLNSKAEAFQAFLLFKTHVEKFFGRSILRLQTDSGGEFR
Query: SFIPFLKTNGIEHRLTCPYTSQQNGIVERKHRHIMDMGLTLLSHASLSLELWDDAFSTAVYIINKLPTKVHTHFISPLEKLFCVKPDYTFMKTFGCLCYP
S + + NGI HRL+CP+TS+QNGI+ERKHRHI+++GLTLL+ ASL L+ W DAFSTAV++IN+LPT+V P E LF KP+Y+ +K FGCLC+P
Subjt: SFIPFLKTNGIEHRLTCPYTSQQNGIVERKHRHIMDMGLTLLSHASLSLELWDDAFSTAVYIINKLPTKVHTHFISPLEKLFCVKPDYTFMKTFGCLCYP
Query: SLRSYNNHKLDPRSTPCIFLGYNSLHKGYKCLSSFGRLYISRHVIFDECAFPTSVFISPSDTDSSVQVQNPLQTISLSTRPLSNAQDIPTSQTTAVDPSV
LR YN HKLD RS+PC FLGY+S HKGYKCL+ GR++ISR V+FDE FP + ++Q P+Q +S ST L + + +V PS+
Subjt: SLRSYNNHKLDPRSTPCIFLGYNSLHKGYKCLSSFGRLYISRHVIFDECAFPTSVFISPSDTDSSVQVQNPLQTISLSTRPLSNAQDIPTSQTTAVDPSV
Query: S-PTPTVPS
S PT + S
Subjt: S-PTPTVPS
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| RVW60229.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 2.1e-128 | 49.9 | Show/hide |
Query: WFPDSGASNHVTNDPSNLSFGAEYQGDNKVHIDNGAGLHIQTIGSSFLKTPS--NTIFHLKNLLHVPHITKNLISVSQFAKDNCVFFEFHPSVCFVKDLT
WFPDSGA+NHVT+D NL+ GAEY G++K+H+ NG GL I IG S + S N + LKN+L VP I KNL+SVSQFA+DN V+FEFHP VCFVKD +
Subjt: WFPDSGASNHVTNDPSNLSFGAEYQGDNKVHIDNGAGLHIQTIGSSFLKTPS--NTIFHLKNLLHVPHITKNLISVSQFAKDNCVFFEFHPSVCFVKDLT
Query: TGQTLLQGKLVDGLYQFTLEK----VAPSSTFISDGSLSPVISSQVFHTHLPSVLNTCNTSNNTSLDLWHNRLGHYAISTVKHILSLCNIPSSNKN-THL
LLQG L GLYQF L K A + +D + ++ + H N+S + DLWH RLGH A V +L+ IP S K+ + +
Subjt: TGQTLLQGKLVDGLYQFTLEK----VAPSSTFISDGSLSPVISSQVFHTHLPSVLNTCNTSNNTSLDLWHNRLGHYAISTVKHILSLCNIPSSNKN-THL
Query: CHAFAVSKCHNLPFTPSSTIYDAPLQLVVADVWGPSYKTSRNNIRFYISFVDVYSRYTWIYFLNSKAEAFQAFLLFKTHVEKFFGRSILRLQTDSGGEFR
C A + K HNLPF S T+Y PLQLVV+D+WGP+ S +Y+SFVD YSRYTW+YFL +K++ +AFL+FK E FG + QTD GGEFR
Subjt: CHAFAVSKCHNLPFTPSSTIYDAPLQLVVADVWGPSYKTSRNNIRFYISFVDVYSRYTWIYFLNSKAEAFQAFLLFKTHVEKFFGRSILRLQTDSGGEFR
Query: SFIPFLKTNGIEHRLTCPYTSQQNGIVERKHRHIMDMGLTLLSHASLSLELWDDAFSTAVYIINKLPTKVHTHFISPLEKLFCVKPDYTFMKTFGCLCYP
S + + NGI HRL+CP+TS+QNGI+ERKHRHI+++GLTLL+ ASL L+ W DAFSTAV++IN+LPT+V P E LF KP+Y+ +K FGCLC+P
Subjt: SFIPFLKTNGIEHRLTCPYTSQQNGIVERKHRHIMDMGLTLLSHASLSLELWDDAFSTAVYIINKLPTKVHTHFISPLEKLFCVKPDYTFMKTFGCLCYP
Query: SLRSYNNHKLDPRSTPCIFLGYNSLHKGYKCLSSFGRLYISRHVIFDECAFPTSVFISPSDTDSSVQVQNPLQTISLSTRPLSNAQDIPTSQTTAVDPSV
LR YN HKLD RS+PC FLGY+S HKGYKCL+ GR++ISR V+FDE FP + ++Q P+Q +S ST L + + +V PS+
Subjt: SLRSYNNHKLDPRSTPCIFLGYNSLHKGYKCLSSFGRLYISRHVIFDECAFPTSVFISPSDTDSSVQVQNPLQTISLSTRPLSNAQDIPTSQTTAVDPSV
Query: S-PTPTVPS
S PT + S
Subjt: S-PTPTVPS
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| TYK10642.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.1e-140 | 54 | Show/hide |
Query: DMNKENHWFPDSGASNHVTNDPSNLSFGAEYQGDNKVHIDNGAGLHIQTIGSSFLKTPSNTI----FHLKNLLHVPHITKNLISVSQFAKDNCVFFEFHP
D+N +++W+PDSGA+NH+T+ SNLS G+EY G N+++ NG+GL I GS + S+T+ F L NLL VP ITKNLISVSQFAKDN VFFEFHP
Subjt: DMNKENHWFPDSGASNHVTNDPSNLSFGAEYQGDNKVHIDNGAGLHIQTIGSSFLKTPSNTI----FHLKNLLHVPHITKNLISVSQFAKDNCVFFEFHP
Query: SVCFVKDLTTGQTLLQGKLVDGLYQFTLEKVAPSSTFISDGSLSPVISSQVFHTHLPSVLNTCNTSNNTSLDLWHNRLGHYAISTVKHILS-LCNIPSSN
++C+VKDL TGQ LLQG L DGLY+FT+E PS + + + + VF+T +P SN LDLWH RLGH + VK +L+ + N +
Subjt: SVCFVKDLTTGQTLLQGKLVDGLYQFTLEKVAPSSTFISDGSLSPVISSQVFHTHLPSVLNTCNTSNNTSLDLWHNRLGHYAISTVKHILS-LCNIPSSN
Query: KNTHLCHAFAVSKCHNLPFTPSSTIYDAPLQLVVADVWGPSYKTSRNNIRFYISFVDVYSRYTWIYFLNSKAEAFQAFLLFKTHVEKFFGRSILRLQTDS
+ C A A+ K H LPF+ S T+Y PLQL+ D+WGP+ S N R+YISFVD YSRYTWIYFLNSK++AF AF FKT VEK G+SI LQTD
Subjt: KNTHLCHAFAVSKCHNLPFTPSSTIYDAPLQLVVADVWGPSYKTSRNNIRFYISFVDVYSRYTWIYFLNSKAEAFQAFLLFKTHVEKFFGRSILRLQTDS
Query: GGEFRSFIPFLKTNGIEHRLTCPYTSQQNGIVERKHRHIMDMGLTLLSHASLSLELWDDAFSTAVYIINKLPTKVHTHFISPLEKLFCVKPDYTFMKTFG
G EF+ F PFL +GIEHR+TCPYTS+QN IVERKHR+IM+MGLTLLS A+L L WD+AFST+VY+IN+LPT V + ISPLEKLFC KP++ ++ FG
Subjt: GGEFRSFIPFLKTNGIEHRLTCPYTSQQNGIVERKHRHIMDMGLTLLSHASLSLELWDDAFSTAVYIINKLPTKVHTHFISPLEKLFCVKPDYTFMKTFG
Query: CLCYPSLRSYNNHKLDPRSTPCIFLGYNSLHKGYKCLSSFGRLYISRHVIFDECAFPTSVFISPSDTDSSVQVQN-PLQTISLSTRPLSNAQDIPTSQTT
C CYP LR Y +HKL RSTPC FLGY++ HKGYKCL+S GRL+ISRHV+FDE +FP + F S S S V + PL +I S+ N T +
Subjt: CLCYPSLRSYNNHKLDPRSTPCIFLGYNSLHKGYKCLSSFGRLYISRHVIFDECAFPTSVFISPSDTDSSVQVQN-PLQTISLSTRPLSNAQDIPTSQTT
Query: AVDPSVSPTPTVP
++PT P
Subjt: AVDPSVSPTPTVP
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2Z7AWA7 Integrase catalytic domain-containing protein | 1.1e-125 | 54.14 | Show/hide |
Query: ENHWFPDSGASNHVTNDPSNLSFGAEYQGDNKVHIDNGAGLHIQTIGSSFLKT-PSNTIFHLKNLLHVPHITKNLISVSQFAKDNCVFFEFHPSVCFVKD
E W+PDSGAS+HVTND NLS +EY G +KV + NGAGL I IG S L PS+ F LKNLLHVP ITKNLISVS+FA DN V+FEFHPS C VKD
Subjt: ENHWFPDSGASNHVTNDPSNLSFGAEYQGDNKVHIDNGAGLHIQTIGSSFLKT-PSNTIFHLKNLLHVPHITKNLISVSQFAKDNCVFFEFHPSVCFVKD
Query: LTTGQTLLQGKLVDGLYQFTLEKVAPSSTFISDGSLSPV-ISSQVFHTHLPSVLNTCNTSNNTSLDLWHNRLGHYAISTVKHILSLCNIP-SSNKNTHLC
T LL+G L +GLY+F L+ + IS SP + S V +P C N +LD WH RLGH +I+TVK +L CN S N N C
Subjt: LTTGQTLLQGKLVDGLYQFTLEKVAPSSTFISDGSLSPV-ISSQVFHTHLPSVLNTCNTSNNTSLDLWHNRLGHYAISTVKHILSLCNIP-SSNKNTHLC
Query: HAFAVSKCHNLPFTPSSTIYDAPLQLVVADVWGPSYKTSRNNIRFYISFVDVYSRYTWIYFLNSKAEAFQAFLLFKTHVEKFFGRSILRLQTDSGGEFRS
+ + K H LPF S+T + AP ++V +D+WGP++ SRN R+YISFVD Y+RYTWIYFL K+E Q F+ F+ + E F I LQTD GGEFRS
Subjt: HAFAVSKCHNLPFTPSSTIYDAPLQLVVADVWGPSYKTSRNNIRFYISFVDVYSRYTWIYFLNSKAEAFQAFLLFKTHVEKFFGRSILRLQTDSGGEFRS
Query: FIPFLKTNGIEHRLTCPYTSQQNGIVERKHRHIMDMGLTLLSHASLSLELWDDAFSTAVYIINKLPTKVHTHFISPLEKLFCVKPDYTFMKTFGCLCYPS
+ ++NGI HR +CPYTS+QNG+VERKHRH++D GL+LL+HASL E W+DAF +AVY+IN+LP+ SP L+ +PDY+ ++ FGCLC+P
Subjt: FIPFLKTNGIEHRLTCPYTSQQNGIVERKHRHIMDMGLTLLSHASLSLELWDDAFSTAVYIINKLPTKVHTHFISPLEKLFCVKPDYTFMKTFGCLCYPS
Query: LRSYNNHKLDPRSTPCIFLGYNSLHKGYKCLSSFGRLYISRHVIFDE
LR YN HKL RSTPC FLGY+ HKGYKCL S GR+YISRHV F+E
Subjt: LRSYNNHKLDPRSTPCIFLGYNSLHKGYKCLSSFGRLYISRHVIFDE
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| A0A438EA49 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.0e-128 | 49.9 | Show/hide |
Query: WFPDSGASNHVTNDPSNLSFGAEYQGDNKVHIDNGAGLHIQTIGSSFLKTPS--NTIFHLKNLLHVPHITKNLISVSQFAKDNCVFFEFHPSVCFVKDLT
WFPDSGA+NHVT+D NL+ GAEY G++K+H+ NG GL I IG S + S N + LKN+L VP I KNL+SVSQFA+DN V+FEFHP VCFVKD +
Subjt: WFPDSGASNHVTNDPSNLSFGAEYQGDNKVHIDNGAGLHIQTIGSSFLKTPS--NTIFHLKNLLHVPHITKNLISVSQFAKDNCVFFEFHPSVCFVKDLT
Query: TGQTLLQGKLVDGLYQFTLEK----VAPSSTFISDGSLSPVISSQVFHTHLPSVLNTCNTSNNTSLDLWHNRLGHYAISTVKHILSLCNIPSSNKN-THL
LLQG L GLYQF L K A + +D + ++ + H N+S + DLWH RLGH A V +L+ IP S K+ + +
Subjt: TGQTLLQGKLVDGLYQFTLEK----VAPSSTFISDGSLSPVISSQVFHTHLPSVLNTCNTSNNTSLDLWHNRLGHYAISTVKHILSLCNIPSSNKN-THL
Query: CHAFAVSKCHNLPFTPSSTIYDAPLQLVVADVWGPSYKTSRNNIRFYISFVDVYSRYTWIYFLNSKAEAFQAFLLFKTHVEKFFGRSILRLQTDSGGEFR
C A + K HNLPF S T+Y PLQLVV+D+WGP+ S +Y+SFVD YSRYTW+YFL +K++ +AFL+FK E FG + QTD GGEFR
Subjt: CHAFAVSKCHNLPFTPSSTIYDAPLQLVVADVWGPSYKTSRNNIRFYISFVDVYSRYTWIYFLNSKAEAFQAFLLFKTHVEKFFGRSILRLQTDSGGEFR
Query: SFIPFLKTNGIEHRLTCPYTSQQNGIVERKHRHIMDMGLTLLSHASLSLELWDDAFSTAVYIINKLPTKVHTHFISPLEKLFCVKPDYTFMKTFGCLCYP
S + + NGI HRL+CP+TS+QNGI+ERKHRHI+++GLTLL+ ASL L+ W DAFSTAV++IN+LPT+V P E LF KP+Y+ +K FGCLC+P
Subjt: SFIPFLKTNGIEHRLTCPYTSQQNGIVERKHRHIMDMGLTLLSHASLSLELWDDAFSTAVYIINKLPTKVHTHFISPLEKLFCVKPDYTFMKTFGCLCYP
Query: SLRSYNNHKLDPRSTPCIFLGYNSLHKGYKCLSSFGRLYISRHVIFDECAFPTSVFISPSDTDSSVQVQNPLQTISLSTRPLSNAQDIPTSQTTAVDPSV
LR YN HKLD RS+PC FLGY+S HKGYKCL+ GR++ISR V+FDE FP + ++Q P+Q +S ST L + + +V PS+
Subjt: SLRSYNNHKLDPRSTPCIFLGYNSLHKGYKCLSSFGRLYISRHVIFDECAFPTSVFISPSDTDSSVQVQNPLQTISLSTRPLSNAQDIPTSQTTAVDPSV
Query: S-PTPTVPS
S PT + S
Subjt: S-PTPTVPS
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| A0A438FJP6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.0e-128 | 49.9 | Show/hide |
Query: WFPDSGASNHVTNDPSNLSFGAEYQGDNKVHIDNGAGLHIQTIGSSFLKTPS--NTIFHLKNLLHVPHITKNLISVSQFAKDNCVFFEFHPSVCFVKDLT
WFPDSGA+NHVT+D NL+ GAEY G++K+H+ NG GL I IG S + S N + LKN+L VP I KNL+SVSQFA+DN V+FEFHP VCFVKD +
Subjt: WFPDSGASNHVTNDPSNLSFGAEYQGDNKVHIDNGAGLHIQTIGSSFLKTPS--NTIFHLKNLLHVPHITKNLISVSQFAKDNCVFFEFHPSVCFVKDLT
Query: TGQTLLQGKLVDGLYQFTLEK----VAPSSTFISDGSLSPVISSQVFHTHLPSVLNTCNTSNNTSLDLWHNRLGHYAISTVKHILSLCNIPSSNKN-THL
LLQG L GLYQF L K A + +D + ++ + H N+S + DLWH RLGH A V +L+ IP S K+ + +
Subjt: TGQTLLQGKLVDGLYQFTLEK----VAPSSTFISDGSLSPVISSQVFHTHLPSVLNTCNTSNNTSLDLWHNRLGHYAISTVKHILSLCNIPSSNKN-THL
Query: CHAFAVSKCHNLPFTPSSTIYDAPLQLVVADVWGPSYKTSRNNIRFYISFVDVYSRYTWIYFLNSKAEAFQAFLLFKTHVEKFFGRSILRLQTDSGGEFR
C A + K HNLPF S T+Y PLQLVV+D+WGP+ S +Y+SFVD YSRYTW+YFL +K++ +AFL+FK E FG + QTD GGEFR
Subjt: CHAFAVSKCHNLPFTPSSTIYDAPLQLVVADVWGPSYKTSRNNIRFYISFVDVYSRYTWIYFLNSKAEAFQAFLLFKTHVEKFFGRSILRLQTDSGGEFR
Query: SFIPFLKTNGIEHRLTCPYTSQQNGIVERKHRHIMDMGLTLLSHASLSLELWDDAFSTAVYIINKLPTKVHTHFISPLEKLFCVKPDYTFMKTFGCLCYP
S + + NGI HRL+CP+TS+QNGI+ERKHRHI+++GLTLL+ ASL L+ W DAFSTAV++IN+LPT+V P E LF KP+Y+ +K FGCLC+P
Subjt: SFIPFLKTNGIEHRLTCPYTSQQNGIVERKHRHIMDMGLTLLSHASLSLELWDDAFSTAVYIINKLPTKVHTHFISPLEKLFCVKPDYTFMKTFGCLCYP
Query: SLRSYNNHKLDPRSTPCIFLGYNSLHKGYKCLSSFGRLYISRHVIFDECAFPTSVFISPSDTDSSVQVQNPLQTISLSTRPLSNAQDIPTSQTTAVDPSV
LR YN HKLD RS+PC FLGY+S HKGYKCL+ GR++ISR V+FDE FP + ++Q P+Q +S ST L + + +V PS+
Subjt: SLRSYNNHKLDPRSTPCIFLGYNSLHKGYKCLSSFGRLYISRHVIFDECAFPTSVFISPSDTDSSVQVQNPLQTISLSTRPLSNAQDIPTSQTTAVDPSV
Query: S-PTPTVPS
S PT + S
Subjt: S-PTPTVPS
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| A0A5A7U233 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.0e-141 | 54.19 | Show/hide |
Query: DMNKENHWFPDSGASNHVTNDPSNLSFGAEYQGDNKVHIDNGAGLHIQTIGSSFLKTPSNTI----FHLKNLLHVPHITKNLISVSQFAKDNCVFFEFHP
D+N +++W+PDSGA+NH+T+ SNLS G+EY G N+++ NG+GL I GS + S+T+ F L NLL VP ITKNLISVSQFAKDN VFFEFHP
Subjt: DMNKENHWFPDSGASNHVTNDPSNLSFGAEYQGDNKVHIDNGAGLHIQTIGSSFLKTPSNTI----FHLKNLLHVPHITKNLISVSQFAKDNCVFFEFHP
Query: SVCFVKDLTTGQTLLQGKLVDGLYQFTLEKVAPSSTFISDGSLSPVISSQVFHTHLPSVLNTCNTSNNTSLDLWHNRLGHYAISTVKHILS-LCNIPSSN
++C+VKDL TGQ LLQG L DGLY+FT+E PS + + + + VF+T +P SN LDLWH RLGH + VK +L+ + N +
Subjt: SVCFVKDLTTGQTLLQGKLVDGLYQFTLEKVAPSSTFISDGSLSPVISSQVFHTHLPSVLNTCNTSNNTSLDLWHNRLGHYAISTVKHILS-LCNIPSSN
Query: KNTHLCHAFAVSKCHNLPFTPSSTIYDAPLQLVVADVWGPSYKTSRNNIRFYISFVDVYSRYTWIYFLNSKAEAFQAFLLFKTHVEKFFGRSILRLQTDS
+ C A A+ K H LPF+ S T+Y PLQL+ D+WGP+ S N R+YISFVD YSRYTWIYFLNSK++AF AF FKT VEK G+SI LQTD
Subjt: KNTHLCHAFAVSKCHNLPFTPSSTIYDAPLQLVVADVWGPSYKTSRNNIRFYISFVDVYSRYTWIYFLNSKAEAFQAFLLFKTHVEKFFGRSILRLQTDS
Query: GGEFRSFIPFLKTNGIEHRLTCPYTSQQNGIVERKHRHIMDMGLTLLSHASLSLELWDDAFSTAVYIINKLPTKVHTHFISPLEKLFCVKPDYTFMKTFG
G EF+ F PFL +GIEHR+TCPYTS+QN IVERKHR+IM+MGLTLLS A+L L WD+AFST+VY+IN+LPT V + ISPLEKLFC KP++ ++ FG
Subjt: GGEFRSFIPFLKTNGIEHRLTCPYTSQQNGIVERKHRHIMDMGLTLLSHASLSLELWDDAFSTAVYIINKLPTKVHTHFISPLEKLFCVKPDYTFMKTFG
Query: CLCYPSLRSYNNHKLDPRSTPCIFLGYNSLHKGYKCLSSFGRLYISRHVIFDECAFPTSVFISPSDTDSSVQVQN-PLQTISLSTRPLSNAQDIPTSQTT
C CYP LR Y +HKL RSTPC FLGY++ HKGYKCL+S GRL+ISRHV+FDE +FP + F S S T S V + PL +I S+ N T +
Subjt: CLCYPSLRSYNNHKLDPRSTPCIFLGYNSLHKGYKCLSSFGRLYISRHVIFDECAFPTSVFISPSDTDSSVQVQN-PLQTISLSTRPLSNAQDIPTSQTT
Query: AVDPSVSPTPTVP
++PT P
Subjt: AVDPSVSPTPTVP
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| A0A5D3CH97 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.0e-140 | 54 | Show/hide |
Query: DMNKENHWFPDSGASNHVTNDPSNLSFGAEYQGDNKVHIDNGAGLHIQTIGSSFLKTPSNTI----FHLKNLLHVPHITKNLISVSQFAKDNCVFFEFHP
D+N +++W+PDSGA+NH+T+ SNLS G+EY G N+++ NG+GL I GS + S+T+ F L NLL VP ITKNLISVSQFAKDN VFFEFHP
Subjt: DMNKENHWFPDSGASNHVTNDPSNLSFGAEYQGDNKVHIDNGAGLHIQTIGSSFLKTPSNTI----FHLKNLLHVPHITKNLISVSQFAKDNCVFFEFHP
Query: SVCFVKDLTTGQTLLQGKLVDGLYQFTLEKVAPSSTFISDGSLSPVISSQVFHTHLPSVLNTCNTSNNTSLDLWHNRLGHYAISTVKHILS-LCNIPSSN
++C+VKDL TGQ LLQG L DGLY+FT+E PS + + + + VF+T +P SN LDLWH RLGH + VK +L+ + N +
Subjt: SVCFVKDLTTGQTLLQGKLVDGLYQFTLEKVAPSSTFISDGSLSPVISSQVFHTHLPSVLNTCNTSNNTSLDLWHNRLGHYAISTVKHILS-LCNIPSSN
Query: KNTHLCHAFAVSKCHNLPFTPSSTIYDAPLQLVVADVWGPSYKTSRNNIRFYISFVDVYSRYTWIYFLNSKAEAFQAFLLFKTHVEKFFGRSILRLQTDS
+ C A A+ K H LPF+ S T+Y PLQL+ D+WGP+ S N R+YISFVD YSRYTWIYFLNSK++AF AF FKT VEK G+SI LQTD
Subjt: KNTHLCHAFAVSKCHNLPFTPSSTIYDAPLQLVVADVWGPSYKTSRNNIRFYISFVDVYSRYTWIYFLNSKAEAFQAFLLFKTHVEKFFGRSILRLQTDS
Query: GGEFRSFIPFLKTNGIEHRLTCPYTSQQNGIVERKHRHIMDMGLTLLSHASLSLELWDDAFSTAVYIINKLPTKVHTHFISPLEKLFCVKPDYTFMKTFG
G EF+ F PFL +GIEHR+TCPYTS+QN IVERKHR+IM+MGLTLLS A+L L WD+AFST+VY+IN+LPT V + ISPLEKLFC KP++ ++ FG
Subjt: GGEFRSFIPFLKTNGIEHRLTCPYTSQQNGIVERKHRHIMDMGLTLLSHASLSLELWDDAFSTAVYIINKLPTKVHTHFISPLEKLFCVKPDYTFMKTFG
Query: CLCYPSLRSYNNHKLDPRSTPCIFLGYNSLHKGYKCLSSFGRLYISRHVIFDECAFPTSVFISPSDTDSSVQVQN-PLQTISLSTRPLSNAQDIPTSQTT
C CYP LR Y +HKL RSTPC FLGY++ HKGYKCL+S GRL+ISRHV+FDE +FP + F S S S V + PL +I S+ N T +
Subjt: CLCYPSLRSYNNHKLDPRSTPCIFLGYNSLHKGYKCLSSFGRLYISRHVIFDECAFPTSVFISPSDTDSSVQVQN-PLQTISLSTRPLSNAQDIPTSQTT
Query: AVDPSVSPTPTVP
++PT P
Subjt: AVDPSVSPTPTVP
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 9.3e-26 | 28.26 | Show/hide |
Query: PVISSQVFHTHLPSVLNTCNTSNNTSLDLWHNRLGHYAISTVKHI--------LSLCNIPSSNKNTHLCHAFAVSKCHNLPF--TPSSTIYDAPLQLVVA
PVI+ Q + + N + + LWH R GH + + I SL N + + +C K LPF T PL +V +
Subjt: PVISSQVFHTHLPSVLNTCNTSNNTSLDLWHNRLGHYAISTVKHI--------LSLCNIPSSNKNTHLCHAFAVSKCHNLPF--TPSSTIYDAPLQLVVA
Query: DVWGPSYKTSRNNIRFYISFVDVYSRYTWIYFLNSKAEAFQAFLLFKTHVEKFFGRSILRLQTDSGGEFRS--FIPFLKTNGIEHRLTCPYTSQQNGIVE
DV GP + ++ +++ FVD ++ Y Y + K++ F F F E F ++ L D+G E+ S F GI + LT P+T Q NG+ E
Subjt: DVWGPSYKTSRNNIRFYISFVDVYSRYTWIYFLNSKAEAFQAFLLFKTHVEKFFGRSILRLQTDSGGEFRS--FIPFLKTNGIEHRLTCPYTSQQNGIVE
Query: RKHRHIMDMGLTLLSHASLSLELWDDAFSTAVYIINKLPTKVHTHFI-SPLEKLFCVKPDYTFMKTFGCLCYPSLRSYNNHKLDPRSTPCIFLGYNSLHK
R R I + T++S A L W +A TA Y+IN++P++ +P E KP ++ FG Y +++ K D +S IF+GY
Subjt: RKHRHIMDMGLTLLSHASLSLELWDDAFSTAVYIINKLPTKVHTHFI-SPLEKLFCVKPDYTFMKTFGCLCYPSLRSYNNHKLDPRSTPCIFLGYNSLHK
Query: GYKCLSSFGRLYI-SRHVIFDE
G+K + +I +R V+ DE
Subjt: GYKCLSSFGRLYI-SRHVIFDE
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-42 | 29.9 | Show/hide |
Query: HDMNKENHWFPDSGASNHVTNDPSNLSFGAEYQGD-NKVHIDNGAGLHIQTIGSSFLKTPSNTIFHLKNLLHVPHITKNLISVSQFAKDNCVFFEFHPSV
H E+ W D+ AS+H T P F GD V + N + I IG +KT LK++ HVP + NLIS +D + +
Subjt: HDMNKENHWFPDSGASNHVTNDPSNLSFGAEYQGD-NKVHIDNGAGLHIQTIGSSFLKTPSNTIFHLKNLLHVPHITKNLISVSQFAKDNCVFFEFHPSV
Query: CFVKDLTTGQTLLQGKLVDG-LYQFTLEKVAPSSTFISDGSLSPVISSQVFHTHLPSVLNTCNTSNNTSLDLWHNRLGHYAISTVKHILSLCNIPSSNKN
LT G ++ + G LY+ E I G L+ + S+DLWH R+GH + ++ IL+ ++ S K
Subjt: CFVKDLTTGQTLLQGKLVDG-LYQFTLEKVAPSSTFISDGSLSPVISSQVFHTHLPSVLNTCNTSNNTSLDLWHNRLGHYAISTVKHILSLCNIPSSNKN
Query: THL--CHAFAVSKCHNLPFTPSSTIYDAPLQLVVADVWGPSYKTSRNNIRFYISFVDVYSRYTWIYFLNSKAEAFQAFLLFKTHVEKFFGRSILRLQTDS
T + C K H + F SS L LV +DV GP S +++++F+D SR W+Y L +K + FQ F F VE+ GR + RL++D+
Subjt: THL--CHAFAVSKCHNLPFTPSSTIYDAPLQLVVADVWGPSYKTSRNNIRFYISFVDVYSRYTWIYFLNSKAEAFQAFLLFKTHVEKFFGRSILRLQTDS
Query: GGEF--RSFIPFLKTNGIEHRLTCPYTSQQNGIVERKHRHIMDMGLTLLSHASLSLELWDDAFSTAVYIINKLPTKVHTHFISPLEKLFCVKPDYTFMKT
GGE+ R F + ++GI H T P T Q NG+ ER +R I++ ++L A L W +A TA Y+IN+ P+ V F P + Y+ +K
Subjt: GGEF--RSFIPFLKTNGIEHRLTCPYTSQQNGIVERKHRHIMDMGLTLLSHASLSLELWDDAFSTAVYIINKLPTKVHTHFISPLEKLFCVKPDYTFMKT
Query: FGCLCYPSLRSYNNHKLDPRSTPCIFLGYNSLHKGYKCLSSFGRLYI-SRHVIFDECAFPTSVFISPSDTDSSVQVQNPLQTISLSTRPLSNAQDIPTSQ
FGC + + KLD +S PCIF+GY GY+ + I SR V+F E T+ D S +V+N + ++ SN PTS
Subjt: FGCLCYPSLRSYNNHKLDPRSTPCIFLGYNSLHKGYKCLSSFGRLYI-SRHVIFDECAFPTSVFISPSDTDSSVQVQNPLQTISLSTRPLSNAQDIPTSQ
Query: TTAVD
+ D
Subjt: TTAVD
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| Q12112 Transposon Ty1-NL1 Gag-Pol polyprotein | 3.7e-14 | 23.76 | Show/hide |
Query: HWFPDSGASNHVTNDPSNLSFGAEYQGDNKVHIDNGAGLHIQTIGSSFLKTPSNTIFHLKNLLHVPHITKNLISVSQFAKDNCVFFEFHPSVCFVKDL--
H DSGAS + ++ + G N V + I IG NT +K +LH P+I +L+S+++ A + + CF K++
Subjt: HWFPDSGASNHVTNDPSNLSFGAEYQGDNKVHIDNGAGLHIQTIGSSFLKTPSNTIFHLKNLLHVPHITKNLISVSQFAKDNCVFFEFHPSVCFVKDL--
Query: -TTGQTLLQGKLVDGLYQFTLEKVAPSSTFI--------SDGSLS---PVISSQVFHTHLPSVL-----NTCNTSNNTSLDLWHNRLGHYAISTVKHILS
+ G L Y + + + PS+ + S+ + P I + H + ++ NT N + +D W S + +
Subjt: -TTGQTLLQGKLVDGLYQFTLEKVAPSSTFI--------SDGSLS---PVISSQVFHTHLPSVL-----NTCNTSNNTSLDLWHNRLGHYAISTVKHILS
Query: LCNIPSSNKNTHLCHAFAVSKCHNLPFTPSSTIYDAPLQLVVADVWGPSYKTSRNNIRFYISFVDVYSRYTWIYFLNSKAE--AFQAFLLFKTHVEKFFG
C I S K+ H+ K L + S Y+ P Q + D++GP + ++ ++ISF D +++ W+Y L+ + E F ++ F
Subjt: LCNIPSSNKNTHLCHAFAVSKCHNLPFTPSSTIYDAPLQLVVADVWGPSYKTSRNNIRFYISFVDVYSRYTWIYFLNSKAE--AFQAFLLFKTHVEKFFG
Query: RSILRLQTDSGGEF--RSFIPFLKTNGIEHRLTCPYTSQQNGIVERKHRHIMDMGLTLLSHASLSLELWDDAFSTAVYIINKL
S+L +Q D G E+ R+ FL+ NGI T S+ +G+ ER +R ++D T L + L LW A + + N L
Subjt: RSILRLQTDSGGEF--RSFIPFLKTNGIEHRLTCPYTSQQNGIVERKHRHIMDMGLTLLSHASLSLELWDDAFSTAVYIINKL
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.8e-85 | 38.7 | Show/hide |
Query: NHWFPDSGASNHVTNDPSNLSFGAEYQGDNKVHIDNGAGLHIQTIGSSFLKTPSNTIFHLKNLLHVPHITKNLISVSQFAKDNCVFFEFHPSVCFVKDLT
N+W DSGA++H+T+D +NLS Y G + V + +G+ + I GS+ L T S + +L N+L+VP+I KNLISV + N V EF P+ VKDL
Subjt: NHWFPDSGASNHVTNDPSNLSFGAEYQGDNKVHIDNGAGLHIQTIGSSFLKTPSNTIFHLKNLLHVPHITKNLISVSQFAKDNCVFFEFHPSVCFVKDLT
Query: TGQTLLQGKLVDGLYQFTLEKVAPSSTFISDGSLSPVISSQVFHTHLPSVLNTCNTSNNTSLDLWHNRLGHYAISTVKHILSLCNIPSSNKNTHL--CHA
TG LLQGK D LY++ + P S F S SS+ H+ WH RLGH A S + ++S ++ N + C
Subjt: TGQTLLQGKLVDGLYQFTLEKVAPSSTFISDGSLSPVISSQVFHTHLPSVLNTCNTSNNTSLDLWHNRLGHYAISTVKHILSLCNIPSSNKNTHL--CHA
Query: FAVSKCHNLPFTPSSTIYDAPLQLVVADVWGPSYKTSRNNIRFYISFVDVYSRYTWIYFLNSKAEAFQAFLLFKTHVEKFFGRSILRLQTDSGGEFRSFI
++K + +PF+ S+ PL+ + +DVW S S +N R+Y+ FVD ++RYTW+Y L K++ + F+ FK +E F I +D+GGEF +
Subjt: FAVSKCHNLPFTPSSTIYDAPLQLVVADVWGPSYKTSRNNIRFYISFVDVYSRYTWIYFLNSKAEAFQAFLLFKTHVEKFFGRSILRLQTDSGGEFRSFI
Query: PFLKTNGIEHRLTCPYTSQQNGIVERKHRHIMDMGLTLLSHASLSLELWDDAFSTAVYIINKLPTKVHTHFISPLEKLFCVKPDYTFMKTFGCLCYPSLR
+ +GI H + P+T + NG+ ERKHRHI++ GLTLLSHAS+ W AF+ AVY+IN+LPT + SP +KLF P+Y ++ FGC CYP LR
Subjt: PFLKTNGIEHRLTCPYTSQQNGIVERKHRHIMDMGLTLLSHASLSLELWDDAFSTAVYIINKLPTKVHTHFISPLEKLFCVKPDYTFMKTFGCLCYPSLR
Query: SYNNHKLDPRSTPCIFLGYNSLHKGYKCLS-SFGRLYISRHVIFDECAFPTSVFISPSDTDSSVQVQNPLQTISLSTRPLSNAQDIPTSQTTAVDPSVSP
YN HKLD +S C+FLGY+ Y CL RLYISRHV FDE FP S +++ T S VQ Q + S + + DP +
Subjt: SYNNHKLDPRSTPCIFLGYNSLHKGYKCLS-SFGRLYISRHVIFDECAFPTSVFISPSDTDSSVQVQNPLQTISLSTRPLSNAQDIPTSQTTAVDPSVSP
Query: T-PTVPSCP
T P+ PS P
Subjt: T-PTVPSCP
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.0e-88 | 39.77 | Show/hide |
Query: NHWFPDSGASNHVTNDPSNLSFGAEYQGDNKVHIDNGAGLHIQTIGSSFLKTPSNTIFHLKNLLHVPHITKNLISVSQFAKDNCVFFEFHPSVCFVKDLT
N+W DSGA++H+T+D +NLSF Y G + V I +G+ + I GS+ L T S ++ L +L+VP+I KNLISV + N V EF P+ VKDL
Subjt: NHWFPDSGASNHVTNDPSNLSFGAEYQGDNKVHIDNGAGLHIQTIGSSFLKTPSNTIFHLKNLLHVPHITKNLISVSQFAKDNCVFFEFHPSVCFVKDLT
Query: TGQTLLQGKLVDGLYQFTLEKVAPSSTFISDGSLSPVISSQVFHTHLPSVLNTCNTSNNTSLDLWHNRLGHYAISTVKHILSLCNIPSSNKNTHL--CHA
TG LLQGK D LY++ P+ SSQ + + C+ + ++S WH+RLGH +++ + ++S ++P N + L C
Subjt: TGQTLLQGKLVDGLYQFTLEKVAPSSTFISDGSLSPVISSQVFHTHLPSVLNTCNTSNNTSLDLWHNRLGHYAISTVKHILSLCNIPSSNKNTHL--CHA
Query: FAVSKCHNLPFTPSSTIYDAPLQLVVADVWGPSYKTSRNNIRFYISFVDVYSRYTWIYFLNSKAEAFQAFLLFKTHVEKFFGRSILRLQTDSGGEFRSFI
++K H +PF+ S+ PL+ + +DVW S S +N R+Y+ FVD ++RYTW+Y L K++ F++FK+ VE F I L +D+GGEF
Subjt: FAVSKCHNLPFTPSSTIYDAPLQLVVADVWGPSYKTSRNNIRFYISFVDVYSRYTWIYFLNSKAEAFQAFLLFKTHVEKFFGRSILRLQTDSGGEFRSFI
Query: PFLKTNGIEHRLTCPYTSQQNGIVERKHRHIMDMGLTLLSHASLSLELWDDAFSTAVYIINKLPTKVHTHFISPLEKLFCVKPDYTFMKTFGCLCYPSLR
+L +GI H + P+T + NG+ ERKHRHI++MGLTLLSHAS+ W AFS AVY+IN+LPT + SP +KLF P+Y +K FGC CYP LR
Subjt: PFLKTNGIEHRLTCPYTSQQNGIVERKHRHIMDMGLTLLSHASLSLELWDDAFSTAVYIINKLPTKVHTHFISPLEKLFCVKPDYTFMKTFGCLCYPSLR
Query: SYNNHKLDPRSTPCIFLGYNSLHKGYKCLS-SFGRLYISRHVIFDECAFP---TSVFISPSDTDSSVQVQNPLQTISLSTRPLSNAQDIPTSQTTAVDPS
YN HKL+ +S C F+GY+ Y CL GRLY SRHV FDE FP T+ +S S S N +L T PL +P + P
Subjt: SYNNHKLDPRSTPCIFLGYNSLHKGYKCLS-SFGRLYISRHVIFDECAFP---TSVFISPSDTDSSVQVQNPLQTISLSTRPLSNAQDIPTSQTTAVDPS
Query: VSPTPTVPSCPLP
+ +P PS P P
Subjt: VSPTPTVPSCPLP
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