; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0013218 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013218
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationchr1:48463100..48464464
RNA-Seq ExpressionLag0013218
SyntenyLag0013218
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_012441796.1 PREDICTED: uncharacterized protein LOC105766768 [Gossypium raimondii]8.3e-3630.33Show/hide
Query:  VRSLLENDGSC-NVRLVKEVFDDNEADLIINIPRGRMTKDDEIIWNQDSKGNFTVKSAYH-LATNLESSNAPFTSVDSSSKTFWRSIWSLNCAPRVKIAV
        V  L++ +G+  +  L+ ++FDDN AD I++IP      +D ++WN +  G++TVKS Y  L T +  S++  +S D   K F+  +WSL    ++KI V
Subjt:  VRSLLENDGSC-NVRLVKEVFDDNEADLIINIPRGRMTKDDEIIWNQDSKGNFTVKSAYH-LATNLESSNAPFTSVDSSSKTFWRSIWSLNCAPRVKIAV

Query:  WKLLNDIVPTNGNICKKGIVTNLLCVFCRKKIESSEHLIWICNLSKGIWDYFLPNLHSFLISCMEELKMIDYWEGIIQKFNREDI---NKAATIMWSLWN
        W+L N++VP   N+ ++ +    +C  C   +E+SEHL+W C + + IW      LH  L      L   D +   ++ F   D+   N  A  +WS W 
Subjt:  WKLLNDIVPTNGNICKKGIVTNLLCVFCRKKIESSEHLIWICNLSKGIWDYFLPNLHSFLISCMEELKMIDYWEGIIQKFNREDI---NKAATIMWSLWN

Query:  ERNRCNSSGKYPNILRLKKQIINFSEVWGESRKTNLKISV---LENQTSHRRWRHPDSGSWKLNVDATWCDKKKAGGVGWIIRDSNGSLIGAGYNQVFHK
         RN+    G    +   + +++ F  + G  ++T L   +   +     +  WR PD G  K+N DA++   K       I R+  G +IGA        
Subjt:  ERNRCNSSGKYPNILRLKKQIINFSEVWGESRKTNLKISV---LENQTSHRRWRHPDSGSWKLNVDATWCDKKKAGGVGWIIRDSNGSLIGAGYNQVFHK

Query:  WEIKLLE--SKAIVEGVKAYLRHANSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFIDEIREMAPLANISIFSKCARQENVGAQLLARAGANFG
         E  L E  S   V   +A  R      +M F  LVVE DS  VIK +  +E D S I   I  I++M        +S   R  N  A LLA  G   G
Subjt:  WEIKLLE--SKAIVEGVKAYLRHANSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFIDEIREMAPLANISIFSKCARQENVGAQLLARAGANFG

XP_024190234.1 uncharacterized protein LOC112194221 [Rosa chinensis]1.7e-3627.97Show/hide
Query:  PLRVKDGFKGKRVRSLLENDGSCNVRLVKEVFDDNEADLIINIPRGRMTKDDEIIWNQDSKGNFTVKSAYHLATNL----ESSNAPFTSVDSSSKTFWRS
        P+    G    +V  L+   G  N  L++  F  +E D I++IP     +DD I+W+    G +TVKS   LA+ L    E S     S +      W +
Subjt:  PLRVKDGFKGKRVRSLLENDGSCNVRLVKEVFDDNEADLIINIPRGRMTKDDEIIWNQDSKGNFTVKSAYHLATNL----ESSNAPFTSVDSSSKTFWRS

Query:  IWSLNCAPRVKIAVWKLLNDIVPTNGNICKKGIVTNLLCVFCRKKIESSEHLIWICNLSKGIWDYFLPNLHSFLISCMEELKMIDYWEGIIQKFNREDIN
        +W L  A +VK+ +W+     +P   N+ ++ +  + LC  C ++ E++ H +W C  SK +W +   N    +     E   ID +  +++  ++E++ 
Subjt:  IWSLNCAPRVKIAVWKLLNDIVPTNGNICKKGIVTNLLCVFCRKKIESSEHLIWICNLSKGIWDYFLPNLHSFLISCMEELKMIDYWEGIIQKFNREDIN

Query:  KAATIMWSLWNERNRCNSSGKYPNILRLKKQIINFSEVW----GESRKTNLKISVLENQTSHR-RWRHPDSGSWKLNVDATWCDKKKAGGVGWIIRDSNG
          + I W LW  RNR     K+  ++   K I+  +  W     +++++N  ++    Q   + +WR P +   KLN DA    KKK   +G ++RD  G
Subjt:  KAATIMWSLWNERNRCNSSGKYPNILRLKKQIINFSEVW----GESRKTNLKISVLENQTSHR-RWRHPDSGSWKLNVDATWCDKKKAGGVGWIIRDSNG

Query:  SLIGAGYNQVFHKWEIKLLESKAIVEGVKAYLRHANSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFIDEIREMAPLANISIFSKCARQENVGAQ
         L  AG+  +     I  +E+ A+  G+  Y R A       F +LVVESDS+ VI AL   E D S     +D+I+ +A       + K  R+ N+ A 
Subjt:  SLIGAGYNQVFHKWEIKLLESKAIVEGVKAYLRHANSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFIDEIREMAPLANISIFSKCARQENVGAQ

Query:  LLAR
         +A+
Subjt:  LLAR

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]5.8e-3727.18Show/hide
Query:  VRSLLENDGSCNVRLVKEVFDDNEADLIINIPRGRMTKDDEIIWNQDSKGNFTVKSAYHLATNLESSNAPFTSVDSSSKTFWRSIWSLNCAPRVKIAVWK
        V  L++ D   +   +++ F D +   I+ IP      +DE++W+ D +GN++VKS Y LA  L S     TS   +S  +W ++W+L    ++KI +W+
Subjt:  VRSLLENDGSCNVRLVKEVFDDNEADLIINIPRGRMTKDDEIIWNQDSKGNFTVKSAYHLATNLESSNAPFTSVDSSSKTFWRSIWSLNCAPRVKIAVWK

Query:  LLNDIVPTNGNICKKGIVTNLLCVFCRKKIESSEHLIWICNLSKGIW---DYFLPNLHSFLISCMEELKMIDYWEGIIQKFNREDINKAATIMWSLWNER
          N+++P+  N+ K+ +V    C  C+  +E+  H +  C  ++ IW    +  P L +          +    + + ++  + D+     + WS W  R
Subjt:  LLNDIVPTNGNICKKGIVTNLLCVFCRKKIESSEHLIWICNLSKGIW---DYFLPNLHSFLISCMEELKMIDYWEGIIQKFNREDINKAATIMWSLWNER

Query:  NRCNSSGKYPNIL----RLKKQIINFSEVWGESRKTNLKISVLENQTSHRRWRHPDSGSWKLNVDATWCDKKKAGGVGWIIRDSNGSLIGAGYNQVFHKW
        N+C   G+  N +    + +  +  F  V  + +++++ IS+ E Q   + W  P    +K+NVDA +  K  + GVG +IRDSNG ++ AG NQ   K 
Subjt:  NRCNSSGKYPNIL----RLKKQIINFSEVWGESRKTNLKISVLENQTSHRRWRHPDSGSWKLNVDATWCDKKKAGGVGWIIRDSNGSLIGAGYNQVFHKW

Query:  EIKLLESKAIVEGVKAYLRHANSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFIDEIREMAPLANISIFSKCARQENVGAQLLAR
           L E++A++ G    L+ A + D     SL++ESD  EV++ +   +   SEI   I  I+    +    + +   R  N  A  LA+
Subjt:  EIKLLESKAIVEGVKAYLRHANSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFIDEIREMAPLANISIFSKCARQENVGAQLLAR

XP_030502823.1 uncharacterized protein LOC115717993 [Cannabis sativa]2.7e-3427.05Show/hide
Query:  VRSLLENDGSCNVRLVKEVFDDNEADLIINIPRGRMTKDDEIIWNQDSKGNFTVKSAYHLATNLESSNAPFTSVDSSSKTFWRSIWSLNCAPRVKIAVWK
        V +L+ ++   ++ L+ E F   + D I+ IP     KDD +IWN +S G +TV++ YH A +LE S+   +S  SS+  +W+ +WSL    ++KI VW+
Subjt:  VRSLLENDGSCNVRLVKEVFDDNEADLIINIPRGRMTKDDEIIWNQDSKGNFTVKSAYHLATNLESSNAPFTSVDSSSKTFWRSIWSLNCAPRVKIAVWK

Query:  LLNDIVPTNGNICKKGIVTNLLCVFCRKKIESSEHLIWICNLSKGIWDYFLPNLHSFLISCMEELKMI--DYWEGIIQKFNREDINKAATIMWSLWNERN
          N+ +P    + K+ ++++  C  C +  ES  H ++ C  ++ +W +      +FL+       M   DY   +   + + ++ +   IMWS+W ERN
Subjt:  LLNDIVPTNGNICKKGIVTNLLCVFCRKKIESSEHLIWICNLSKGIWDYFLPNLHSFLISCMEELKMI--DYWEGIIQKFNREDINKAATIMWSLWNERN

Query:  RCNSSGKYPNILRLKKQIINFSEVWGESRKTNLKISVLENQTSHRR--------------WRHPDSGSWKLNVDATWCDKKKAGGVGWIIRDSNGSLIGA
        R     +  +   L    +N+ + +  +++ +L     +N  S                 W+ P +G  KLNVDA     KK  G+G ++RDSNG +  A
Subjt:  RCNSSGKYPNILRLKKQIINFSEVWGESRKTNLKISVLENQTSHRR--------------WRHPDSGSWKLNVDATWCDKKKAGGVGWIIRDSNGSLIGA

Query:  GYNQVFHKWEIKLLESKAIVEGVKAYLRHANSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFIDEIREMAPL----ANISIFSKCARQENVGAQL
            V   ++   +E+ A+   +   L+       +  P   +E+D+  V  AL      +S IS F D I +++ L     N+ I S   R  N+ A  
Subjt:  GYNQVFHKWEIKLLESKAIVEGVKAYLRHANSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFIDEIREMAPL----ANISIFSKCARQENVGAQL

Query:  LAR
        LA+
Subjt:  LAR

XP_042942883.1 uncharacterized protein LOC122277065 [Carya illinoinensis]4.9e-3627.5Show/hide
Query:  TPLRVKDGFKGKRVRSLLE-NDGSCNVRLVKEVFDDNEADLIINIPRGRMTKDDEIIWNQDSKGNFTVKSAYHLATNLESSNAPFTSVDSSSKTFWRSIW
        +P+RV DG     V  L++    S    LVKE+F++ EA++I+  P   M   D +IW+    G+F+V+SAYH+  + E ++    S     K  W  +W
Subjt:  TPLRVKDGFKGKRVRSLLE-NDGSCNVRLVKEVFDDNEADLIINIPRGRMTKDDEIIWNQDSKGNFTVKSAYHLATNLESSNAPFTSVDSSSKTFWRSIW

Query:  SLNCAPRVKIAVWKLLNDIVPTNGNICKKGIVTNLLCVFCRKKIESSEHLIWICNLSKGIWDYFLPNLHSFLISCMEELKMIDYWEGIIQKFNREDINKA
         +  AP  K+ +W+   D +PT  N+ K+ I ++ LC  C ++ ES+ H++W C  +K +W      L     S M  L   +++E + +  N +++ + 
Subjt:  SLNCAPRVKIAVWKLLNDIVPTNGNICKKGIVTNLLCVFCRKKIESSEHLIWICNLSKGIWDYFLPNLHSFLISCMEELKMIDYWEGIIQKFNREDINKA

Query:  ATIMWSLWNERNR--CNSSGKYPNILRLKKQIINFSEVWGESRKTNLKISVLENQTSHRRWRHPDSGSWKLNVDATWCDKKKAGGVGWIIRDSNGSLIGA
          +   LW  RN    N     PNIL  + ++    ++  E  ++  +I+V +   S   W+ P +  +K+N DA     K   G+G ++RD  G  I  
Subjt:  ATIMWSLWNERNR--CNSSGKYPNILRLKKQIINFSEVWGESRKTNLKISVLENQTSHRRWRHPDSGSWKLNVDATWCDKKKAGGVGWIIRDSNGSLIGA

Query:  GYNQVFHKWEIKLLESKAIVEGVKAYLRHANSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFIDEIREMAPLANISIFSKCARQENVGAQLLARA
               +    L     + E   A +    + D +    +++E DS +V ++L G+ +D S  S+F+ E R    L    I S   R  N  A LLA++
Subjt:  GYNQVFHKWEIKLLESKAIVEGVKAYLRHANSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFIDEIREMAPLANISIFSKCARQENVGAQLLARA

TrEMBL top hitse value%identityAlignment
A0A5E4FZN9 PREDICTED: retrotransposon3.8e-3426.53Show/hide
Query:  VRSLLENDGSCNVRLVKEVFDDNEADLIINIPRGRMTKDDEIIWNQDSKGNFTVKSAYHLA--TNLESSNAPFTSVDSSSKTFWRSIWSLNCAPRVKIAV
        V  L  + G  NV L+K++F D E D  + IP   +   D +IW+ +  G ++VKS Y LA     + S  P   VD +SK FW+ IW+L    ++K  +
Subjt:  VRSLLENDGSCNVRLVKEVFDDNEADLIINIPRGRMTKDDEIIWNQDSKGNFTVKSAYHLA--TNLESSNAPFTSVDSSSKTFWRSIWSLNCAPRVKIAV

Query:  WKLLNDIVPTNGNICKKGIVTNLLCVFCRKKIESSEHLIWICNLSKGIWDYFLPNLHSFLISCMEELKMIDY---WEGIIQKFNREDINKAATIMWSLWN
        W+   D +P    +  + I    +C  C +K ES  H +W+C  +K +W       +S   +  EE ++  +   W  +    + E+    A + W LWN
Subjt:  WKLLNDIVPTNGNICKKGIVTNLLCVFCRKKIESSEHLIWICNLSKGIWDYFLPNLHSFLISCMEELKMIDY---WEGIIQKFNREDINKAATIMWSLWN

Query:  ERNRCNSSGKYPNILRLKKQIINFSEVWGESRKTNLKISVLENQTSHRR----WRHPDSGSWKLNVDATWCDKKKAGGVGWIIRDSNGSLIGAGYNQVFH
         RN     GK     +L  ++   ++ +  S   NL  ++   Q+S +     WR P +G +K+NVD          GVG ++R++NG  + A   ++  
Subjt:  ERNRCNSSGKYPNILRLKKQIINFSEVWGESRKTNLKISVLENQTSHRR----WRHPDSGSWKLNVDATWCDKKKAGGVGWIIRDSNGSLIGAGYNQVFH

Query:  KWEIKLLESKAIVEGVKAYLRHANSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFIDEIREMAPLANISIFSKCARQENVGAQLLAR
         +  +  E  A +EG++  +        M F + V+E D+ + I +++  E+ N    L I+E+  +       +     R  N  A  LA+
Subjt:  KWEIKLLESKAIVEGVKAYLRHANSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFIDEIREMAPLANISIFSKCARQENVGAQLLAR

A0A6P6WSG1 uncharacterized protein LOC1137355691.7e-3427.08Show/hide
Query:  NDGSCNVRLVKEVFDDNEADLIINIPRGRMTKDDEIIWNQDSKGNFTVKSAYHLATNLESSNAPFTSVDSSS-KTFWRSIWSLNCAPRVKIAVWKLLNDI
        N     V L++E+F  +E +LI+ IP G     D++IW+    G+FTVKSAYHL     +      S  + S +  W  +W LN   +VKI +W++   I
Subjt:  NDGSCNVRLVKEVFDDNEADLIINIPRGRMTKDDEIIWNQDSKGNFTVKSAYHLATNLESSNAPFTSVDSSS-KTFWRSIWSLNCAPRVKIAVWKLLNDI

Query:  VPTNGNICKKGIVTNLLCVFCRKKIESSEHLIWICNLSKGIWDYFLPNLHSFLISCMEELKMIDYW-EGIIQKFNREDINKAATIMWSLWNERNRCNSSG
        +PT+  +  +G+  + +C+ C+  +E   HL   C ++   W      L   L    +  K +  W  G++    ++D+   A I+W+LW  RN     G
Subjt:  VPTNGNICKKGIVTNLLCVFCRKKIESSEHLIWICNLSKGIWDYFLPNLHSFLISCMEELKMIDYW-EGIIQKFNREDINKAATIMWSLWNERNRCNSSG

Query:  KYPNILRLKKQIINFSEVWGE---SRKTNLKISVLENQTSHRRWRHPDSGSWKLNVDATWCDKKKAGGVGWIIRDSNGSLIGAGYNQVFHKWEIKLLESK
         Y + L L    INF + + E   S  T ++ S+     +   W  P  G  K N D     +    GVG ++RD  G+ +    +++   +  +++E+ 
Subjt:  KYPNILRLKKQIINFSEVWGE---SRKTNLKISVLENQTSHRRWRHPDSGSWKLNVDATWCDKKKAGGVGWIIRDSNGSLIGAGYNQVFHKWEIKLLESK

Query:  AIVEGVKAYLRHANSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFIDEIREMAPLANISIFSK--CARQENVGAQLLAR
        A    +   L+          P++++E DS +++  L   E D+S   + +D+I     L N + +      R+ NV A LLAR
Subjt:  AIVEGVKAYLRHANSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFIDEIREMAPLANISIFSK--CARQENVGAQLLAR

A0A803PM52 Uncharacterized protein1.3e-3427.05Show/hide
Query:  VRSLLENDGSCNVRLVKEVFDDNEADLIINIPRGRMTKDDEIIWNQDSKGNFTVKSAYHLATNLESSNAPFTSVDSSSKTFWRSIWSLNCAPRVKIAVWK
        V +L+ ++   ++ L+ E F   + D I+ IP     KDD +IWN +S G +TV++ YH A +LE S+   +S  SS+  +W+ +WSL    ++KI VW+
Subjt:  VRSLLENDGSCNVRLVKEVFDDNEADLIINIPRGRMTKDDEIIWNQDSKGNFTVKSAYHLATNLESSNAPFTSVDSSSKTFWRSIWSLNCAPRVKIAVWK

Query:  LLNDIVPTNGNICKKGIVTNLLCVFCRKKIESSEHLIWICNLSKGIWDYFLPNLHSFLISCMEELKMI--DYWEGIIQKFNREDINKAATIMWSLWNERN
          N+ +P    + K+ ++++  C  C +  ES  H ++ C  ++ +W +      +FL+       M   DY   +   + + ++ +   IMWS+W ERN
Subjt:  LLNDIVPTNGNICKKGIVTNLLCVFCRKKIESSEHLIWICNLSKGIWDYFLPNLHSFLISCMEELKMI--DYWEGIIQKFNREDINKAATIMWSLWNERN

Query:  RCNSSGKYPNILRLKKQIINFSEVWGESRKTNLKISVLENQTSHRR--------------WRHPDSGSWKLNVDATWCDKKKAGGVGWIIRDSNGSLIGA
        R     +  +   L    +N+ + +  +++ +L     +N  S                 W+ P +G  KLNVDA     KK  G+G ++RDSNG +  A
Subjt:  RCNSSGKYPNILRLKKQIINFSEVWGESRKTNLKISVLENQTSHRR--------------WRHPDSGSWKLNVDATWCDKKKAGGVGWIIRDSNGSLIGA

Query:  GYNQVFHKWEIKLLESKAIVEGVKAYLRHANSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFIDEIREMAPL----ANISIFSKCARQENVGAQL
            V   ++   +E+ A+   +   L+       +  P   +E+D+  V  AL      +S IS F D I +++ L     N+ I S   R  N+ A  
Subjt:  GYNQVFHKWEIKLLESKAIVEGVKAYLRHANSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFIDEIREMAPL----ANISIFSKCARQENVGAQL

Query:  LAR
        LA+
Subjt:  LAR

A0A803QEG9 Uncharacterized protein2.4e-3626.93Show/hide
Query:  VRSLLENDGSCNVRLVKEVFDDNEADLIINIPRGRMTKDDEIIWNQDSKGNFTVKSAYHLATNLESSNAPFTSVDSSSKTFWRSIWSLNCAPRVKIAVWK
        V +L+ ++   N+ L+++ F   + + I+ +P       D++IW+  S GNFTV+SAYHLAT+LE  N   +S  +S+  +W+  WSL    +VKI  W+
Subjt:  VRSLLENDGSCNVRLVKEVFDDNEADLIINIPRGRMTKDDEIIWNQDSKGNFTVKSAYHLATNLESSNAPFTSVDSSSKTFWRSIWSLNCAPRVKIAVWK

Query:  LLNDIVPTNGNICKKGIVTNLLCVFCRKKIESSEHLIWICNLSKGIWDYFLPNLHSFLISCMEELKMIDYWEGIIQKFNREDINKAATIMWSLWNERN--
        +++D +P   ++ ++ I+T+  C  C++  ES+ H ++ C  +K +W  F  N   F  S    +K  DY   +   +N+ ++ +   IMW++W ERN  
Subjt:  LLNDIVPTNGNICKKGIVTNLLCVFCRKKIESSEHLIWICNLSKGIWDYFLPNLHSFLISCMEELKMIDYWEGIIQKFNREDINKAATIMWSLWNERN--

Query:  -------RCNSSGKYPNILRLKKQIINFSEVWGESRKTNLKISVLENQTSH--------RRWRHPDSGSWKLNVDATWCDKKKAGGVGWIIRDSNGSLIG
               R N    +  +     +      V   +      ++    Q S           WR P +  +KLN DA   +     GVG ++RD++GS+ G
Subjt:  -------RCNSSGKYPNILRLKKQIINFSEVWGESRKTNLKISVLENQTSH--------RRWRHPDSGSWKLNVDATWCDKKKAGGVGWIIRDSNGSLIG

Query:  AGYNQVFHKWEIKLLESKAIVEGVKAYLRHANSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFIDEIREMAP-LANISIFSKCARQENVGAQLLA
        A    +   ++   +E+KA+   +   L+          P   +E+D+  V+ AL    + NSE S  I ++  +     N+S+ S   R  N  A  LA
Subjt:  AGYNQVFHKWEIKLLESKAIVEGVKAYLRHANSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFIDEIREMAP-LANISIFSKCARQENVGAQLLA

Query:  R
        +
Subjt:  R

A0A803QH76 Uncharacterized protein2.4e-3326.87Show/hide
Query:  VRSLLENDGSCNVRLVKEVFDDNEADLIINIPRGRMTKDDEIIWNQDSKGNFTVKSAYHLATNLESSNAPFTSVDSSSKTFWRSIWSLNCAPRVKIAVWK
        V   + ++   +++L+++ F D +   I++IP     KDD+I+W+    G +TV+S YHLA +L+S +   +S  S+++ +W  +WSL    +VKI  W+
Subjt:  VRSLLENDGSCNVRLVKEVFDDNEADLIINIPRGRMTKDDEIIWNQDSKGNFTVKSAYHLATNLESSNAPFTSVDSSSKTFWRSIWSLNCAPRVKIAVWK

Query:  LLNDIVPTNGNICKKGIVTNLLCVFCRKKIESSEHLIWICNLSKGIWDYFLPNLHSFLISCMEELKMIDYWEGIIQKFNREDINKAATIMWSLWNERNR-
        L+ND +PT  N+  + I ++  C  C+   ES  H ++ C+ +K +WD F  N+    I  +  +K  D +  +    N  D+     ++W +W+ERN+ 
Subjt:  LLNDIVPTNGNICKKGIVTNLLCVFCRKKIESSEHLIWICNLSKGIWDYFLPNLHSFLISCMEELKMIDYWEGIIQKFNREDINKAATIMWSLWNERNR-

Query:  ------------CNSSGKYPNILRLKKQIINFSEVWG-ESRKTNLKISVLENQTSHRRWRHPDSGSWKLNVDATWCDKKKAGGVGWIIRDSNGSLIGAGY
                    C+ +  Y  + + K          G  S   N  + V   + +  +W+ PD G +KLNVDA   +     G G I+RD +G +I AG 
Subjt:  ------------CNSSGKYPNILRLKKQIINFSEVWG-ESRKTNLKISVLENQTSHRRWRHPDSGSWKLNVDATWCDKKKAGGVGWIIRDSNGSLIGAGY

Query:  NQVF-HKWEIKLLESKAIVEGVKAYLRHANSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFIDEIREMAPLANISIF-----SKCARQENVGAQL
        ++ F   +  K +E  A+   ++  L+       +  P   +E+D+  V+ AL         ++ F D + +++ L  +S F     S   R  N  A  
Subjt:  NQVF-HKWEIKLLESKAIVEGVKAYLRHANSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFIDEIREMAPLANISIF-----SKCARQENVGAQL

Query:  LA
        LA
Subjt:  LA

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657509.0e-0921.82Show/hide
Query:  DEIIWNQDSKGNFTVKSAYHLATNLESSNAPFTSVDSSSKTFWRSIWSLNCAPRVKIAVWKLLNDIVPTNGNICKKGIVTNLLCVFCRKKIESSEHLIWI
        D + W     G F+V+SAY + T  E       S       F+  +W +    RVK  +W + N  V T     ++ +  + +C  C+  +ES  H++  
Subjt:  DEIIWNQDSKGNFTVKSAYHLATNLESSNAPFTSVDSSSKTFWRSIWSLNCAPRVKIAVWKLLNDIVPTNGNICKKGIVTNLLCVFCRKKIESSEHLIWI

Query:  CNLSKGIWDYFLPNLHS---FLISCMEELKMIDYWEGIIQKFNREDINKA---ATIMWSLWNERNRC-NSSGKYPNILRLKKQIINFSEVWGESRKTNLK
        C    GIW   +P       F  S  E L     ++ +  +   EDI  +   A I+W  W  + RC N  G+        K +  ++     +   N+ 
Subjt:  CNLSKGIWDYFLPNLHS---FLISCMEELKMIDYWEGIIQKFNREDINKA---ATIMWSLWNERNRC-NSSGKYPNILRLKKQIINFSEVWGESRKTNLK

Query:  ISVLENQTSHR-RWRHPDSGSWKLNVDATWCDKKKAGGVGWIIRDSNGSLIG-----------------AGYNQVFHKWEIKL--LESKAIVEGVKAYLR
        + + + +      W  P  G  K+N D            G ++RD  G+  G                   Y  ++  WE K+  +E +   E +  +L+
Subjt:  ISVLENQTSHR-RWRHPDSGSWKLNVDATWCDKKKAGGVGWIIRDSNGSLIG-----------------AGYNQVFHKWEIKL--LESKAIVEGVKAYLR

Query:  HANSEDH
           S+ H
Subjt:  HANSEDH

Arabidopsis top hitse value%identityAlignment
AT1G52990.1 thioredoxin family protein3.6e-0523.85Show/hide
Query:  KLNVDATWCDKKKAGGVGWIIRDSNGSLIGAGYNQVFHKWEIKLLESKAIVEGVKAYLRHANSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFID
        K N DA+  +     G+GW+IR+S G+++  G  +   +   +  E  A++  ++A            +  ++ E D+S V   LI  + DN  +  ++D
Subjt:  KLNVDATWCDKKKAGGVGWIIRDSNGSLIGAGYNQVFHKWEIKLLESKAIVEGVKAYLRHANSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFID

Query:  EIREMAPLANISIFSKCARQENVGAQLLAR
         I+   P    + F    R++N  A  L +
Subjt:  EIREMAPLANISIFSKCARQENVGAQLLAR

AT3G09510.1 Ribonuclease H-like superfamily protein6.0e-2423.43Show/hide
Query:  PLRVKDGFKGKRVRSLLENDGS---CNVRLVKEVFDDNEADLIINIPRGRMTKDDEIIWNQDSKGNFTVKSAYHLATNLESSNAPFTSVDSSSKTFWRSI
        PL  ++ +K   + +L E  GS    +   + +  D ++   I  I   +  K D+IIWN ++ G +TV+S Y L T+  S+N P  +    S      I
Subjt:  PLRVKDGFKGKRVRSLLENDGS---CNVRLVKEVFDDNEADLIINIPRGRMTKDDEIIWNQDSKGNFTVKSAYHLATNLESSNAPFTSVDSSSKTFWRSI

Query:  WSLNCAPRVKIAVWKLLNDIVPTNGNICKKGIVTNLLCVFCRKKIESSEHLIWICNLSKGIWDYFLPNLHSFLISCMEELKMIDYWEGIIQKFNREDINK
        W+L   P++K  +W+ L+  + T   +  +G+  +  C  C ++ ES  H ++ C  +   W     +L    +   +  + I      +Q     D +K
Subjt:  WSLNCAPRVKIAVWKLLNDIVPTNGNICKKGIVTNLLCVFCRKKIESSEHLIWICNLSKGIWDYFLPNLHSFLISCMEELKMIDYWEGIIQKFNREDINK

Query:  AATI--MWSLWNERNRC--NSSGKYPN--ILRLKKQIINFSEVWGESRKT-NLKISVLENQTSHRRWRHPDSGSWKLNVDATWCDKKKAGGVGWIIRDSN
           +  +W +W  RN    N   + P+  +L  K +  ++       +KT +    + EN+     WR+P +   K N DA +  +K     GWIIR+  
Subjt:  AATI--MWSLWNERNRC--NSSGKYPN--ILRLKKQIINFSEVWGESRKT-NLKISVLENQTSHRRWRHPDSGSWKLNVDATWCDKKKAGGVGWIIRDSN

Query:  GSLIGAGYNQVFHKWEIKLLESKAIVEGV-KAYLRHANSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFIDEIREMAPLANISIFSKCARQENVG
        G+ I  G  ++ H       E+KA++  + + ++R         +  + +E D   +I  LI     +S ++  +++I   A       F    R+ N  
Subjt:  GSLIGAGYNQVFHKWEIKLLESKAIVEGV-KAYLRHANSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFIDEIREMAPLANISIFSKCARQENVG

Query:  AQLLARAGANFGVF
        A +LA+ G  +  F
Subjt:  AQLLARAGANFGVF

AT3G25270.1 Ribonuclease H-like superfamily protein6.4e-1824.84Show/hide
Query:  IWSLNCAPRVKIAVWKLLNDIVPTNGNICKKGIVTNLLCVFCRKKIESSEHLIWICNLSKGIWDYF-LPNLHSFLISCMEELKMIDYWEGIIQKFNREDI
        IW L  AP++K  +WKLL+  + T  N+ ++ I  +  C  C ++ E+S+HL + C  ++ +W    +P+          E KM       +     +  
Subjt:  IWSLNCAPRVKIAVWKLLNDIVPTNGNICKKGIVTNLLCVFCRKKIESSEHLIWICNLSKGIWDYF-LPNLHSFLISCMEELKMIDYWEGIIQKFNREDI

Query:  NKAATIMWSLWNERNRCNSSGKYPNILRLKKQIINFSEVWGESRKTNLKISVLENQT----------SHRRWRHPDSGSWKLNVDATWCDKKKAGGVGWI
        N A  I+W LW  RN+     K  +     ++  N  + W +   TN  +  L  Q           +  +W+ P S   K N D  +  + +    GW+
Subjt:  NKAATIMWSLWNERNRCNSSGKYPNILRLKKQIINFSEVWGESRKTNLKISVLENQT----------SHRRWRHPDSGSWKLNVDATWCDKKKAGGVGWI

Query:  IRDSNGSLIGAGYNQVFHKWEIKLLESKAIVEGVKAYLRHANSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFIDEIREMAPLANISIFSKCARQ
        +RD NG  +G+G  Q         LES+   + +   ++HA S+    +  ++ E DS +V + L+ +E  N     +I E R        ++F    R 
Subjt:  IRDSNGSLIGAGYNQVFHKWEIKLLESKAIVEGVKAYLRHANSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFIDEIREMAPLANISIFSKCARQ

Query:  ENVGAQLLAR
         N  A +LA+
Subjt:  ENVGAQLLAR

AT4G29090.1 Ribonuclease H-like superfamily protein1.6e-2124.13Show/hide
Query:  RVRSLLENDG-SCNVRLVKEVFDDNEADLIINIPRGRMTKDDEIIWNQDSKGNFTVKSAYHLATN-LESSNAPFTSVDSSSKTFWRSIWSLNCAPRVKIA
        +V  L++  G      +++ +F + E  LI  +  G     D   W+  S G++TVKS Y + T  +   ++P    + S    ++ IW    +P+++  
Subjt:  RVRSLLENDG-SCNVRLVKEVFDDNEADLIINIPRGRMTKDDEIIWNQDSKGNFTVKSAYHLATN-LESSNAPFTSVDSSSKTFWRSIWSLNCAPRVKIA

Query:  VWKLLNDIVPTNGNICKKGIVTNLLCVFCRKKIESSEHLIWICNLSKGIW---DYFLPNLHSFLISCMEELKMIDYWEGIIQKFNREDINKAAT----IM
        +WK L++ +P  G +  + +     C+ C    E+  HL++ C  ++  W      +P    +  S    L    YW   +   N +   KA+     ++
Subjt:  VWKLLNDIVPTNGNICKKGIVTNLLCVFCRKKIESSEHLIWICNLSKGIW---DYFLPNLHSFLISCMEELKMIDYWEGIIQKFNREDINKAAT----IM

Query:  WSLWNERNRCNSSGKYPNILRLKKQIINFSEVW---GESRKTNLKISVLENQTSHRRWRHPDSGSWKLNVDATWCDKKKAGGVGWIIRDSNGSLIGAGYN
        W LW  RN     G+  N   + ++  +  E W    E+     K  V  N++S  RWR P     K N DATW    +  G+GW++R+  G +   G  
Subjt:  WSLWNERNRCNSSGKYPNILRLKKQIINFSEVW---GESRKTNLKISVLENQTSHRRWRHPDSGSWKLNVDATWCDKKKAGGVGWIIRDSNGSLIGAGYN

Query:  QVFHKWEIKLLESKAIVEGVKAYLRHA-NSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFIDEIREMAPLANISIFSKCARQENVGAQLLARAGA
                 L + K+++E     +R A  S     +  ++ ESDS  +I+ L  DE   S      D  R ++    +  F    R+ N  A+ +AR   
Subjt:  QVFHKWEIKLLESKAIVEGVKAYLRHA-NSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFIDEIREMAPLANISIFSKCARQENVGAQLLARAGA

Query:  NF
        +F
Subjt:  NF

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.9e-0921.83Show/hide
Query:  IMWSLWNERNRCNSSGKYPNILRLKKQIINFSEVWGESRKTNLKISVLENQTSHR--RWRHPDSGSWKLNVDATWCDKKKAGGVGWIIRDSNGSLIGAGY
        +MW +W   N    +          +  +N ++ W ++  TN + +   N    R  +W  P     K N DA+  ++    G+GWI+R+S G++I  G 
Subjt:  IMWSLWNERNRCNSSGKYPNILRLKKQIINFSEVWGESRKTNLKISVLENQTSHR--RWRHPDSGSWKLNVDATWCDKKKAGGVGWIIRDSNGSLIGAGY

Query:  NQVFHKWEIKLLESKAIVEGVKAYLRHANSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFIDEIREMAPLANISIFSKCARQENVGAQLLAR
         +   +   +  E   ++  ++A         + F    V+    ++ I  +I  +  N  +  F+D I+   P      FS   R++N  A  LA+
Subjt:  NQVFHKWEIKLLESKAIVEGVKAYLRHANSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFIDEIREMAPLANISIFSKCARQENVGAQLLAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAAAAAAGGGATAGAACTCCTTTGAGAGTAAAAGATGGTTTCAAAGGCAAGAGGGTGAGATCTCTGCTGGAAAATGATGGAAGCTGTAATGTTAGGCTAGTCAA
AGAAGTTTTTGATGATAATGAAGCTGATCTGATCATTAACATTCCCAGAGGCAGGATGACTAAAGATGATGAGATTATTTGGAACCAAGACTCAAAAGGGAACTTTACAG
TTAAGAGTGCATATCACTTGGCCACAAACCTGGAAAGCTCCAATGCTCCTTTTACGTCGGTTGATTCATCCTCTAAAACGTTTTGGAGATCCATTTGGAGCTTGAACTGT
GCCCCAAGAGTAAAAATAGCAGTGTGGAAACTCTTAAACGATATTGTCCCAACCAATGGAAATATTTGCAAAAAAGGAATTGTGACTAACCTTTTGTGTGTATTTTGCAG
GAAAAAGATCGAGTCCTCAGAGCATCTAATATGGATATGTAATTTGTCAAAGGGGATCTGGGATTACTTCCTTCCAAACTTACACTCTTTCCTCATCTCTTGCATGGAAG
AGCTGAAAATGATAGATTATTGGGAGGGCATTATACAAAAATTCAACAGAGAAGACATCAACAAAGCAGCAACCATAATGTGGAGTTTATGGAATGAAAGAAACAGGTGT
AACTCCAGTGGAAAATACCCAAACATTCTCAGATTAAAAAAGCAAATTATCAATTTCTCAGAAGTATGGGGCGAATCGAGGAAGACTAACTTGAAGATTTCCGTCTTGGA
GAACCAAACGAGTCACAGACGTTGGAGGCATCCGGATTCGGGTAGCTGGAAACTCAATGTCGATGCGACTTGGTGCGATAAGAAGAAGGCGGGTGGTGTTGGGTGGATCA
TCCGTGACTCGAATGGGTCTTTAATTGGAGCGGGATACAATCAGGTTTTTCATAAATGGGAAATTAAACTGCTGGAATCAAAAGCTATTGTTGAAGGTGTAAAGGCTTAC
CTGAGGCATGCGAATTCTGAGGATCATATGTTCTTCCCTTCGCTTGTGGTTGAATCCGACTCTAGCGAGGTAATTAAAGCTCTGATTGGCGATGAGGACGACAATTCAGA
AATTTCCTTGTTCATCGATGAAATCCGCGAGATGGCCCCTCTAGCCAACATCTCCATTTTCTCCAAATGTGCTAGACAGGAAAATGTGGGAGCGCAACTTTTGGCGCGAG
CGGGAGCGAATTTTGGTGTTTTTTCTTTTTTTGTGGGACGCAGCTTGTTCCTAGTGCTGGGCTTTTTGGACTATATTAGGAACTCTTCAGTTCACAGCTGGTTCTCTTCA
ATCATTAATGAAGAGATAGATGTAACTTCCCTTCCGTTTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGAAAAAAGGGATAGAACTCCTTTGAGAGTAAAAGATGGTTTCAAAGGCAAGAGGGTGAGATCTCTGCTGGAAAATGATGGAAGCTGTAATGTTAGGCTAGTCAA
AGAAGTTTTTGATGATAATGAAGCTGATCTGATCATTAACATTCCCAGAGGCAGGATGACTAAAGATGATGAGATTATTTGGAACCAAGACTCAAAAGGGAACTTTACAG
TTAAGAGTGCATATCACTTGGCCACAAACCTGGAAAGCTCCAATGCTCCTTTTACGTCGGTTGATTCATCCTCTAAAACGTTTTGGAGATCCATTTGGAGCTTGAACTGT
GCCCCAAGAGTAAAAATAGCAGTGTGGAAACTCTTAAACGATATTGTCCCAACCAATGGAAATATTTGCAAAAAAGGAATTGTGACTAACCTTTTGTGTGTATTTTGCAG
GAAAAAGATCGAGTCCTCAGAGCATCTAATATGGATATGTAATTTGTCAAAGGGGATCTGGGATTACTTCCTTCCAAACTTACACTCTTTCCTCATCTCTTGCATGGAAG
AGCTGAAAATGATAGATTATTGGGAGGGCATTATACAAAAATTCAACAGAGAAGACATCAACAAAGCAGCAACCATAATGTGGAGTTTATGGAATGAAAGAAACAGGTGT
AACTCCAGTGGAAAATACCCAAACATTCTCAGATTAAAAAAGCAAATTATCAATTTCTCAGAAGTATGGGGCGAATCGAGGAAGACTAACTTGAAGATTTCCGTCTTGGA
GAACCAAACGAGTCACAGACGTTGGAGGCATCCGGATTCGGGTAGCTGGAAACTCAATGTCGATGCGACTTGGTGCGATAAGAAGAAGGCGGGTGGTGTTGGGTGGATCA
TCCGTGACTCGAATGGGTCTTTAATTGGAGCGGGATACAATCAGGTTTTTCATAAATGGGAAATTAAACTGCTGGAATCAAAAGCTATTGTTGAAGGTGTAAAGGCTTAC
CTGAGGCATGCGAATTCTGAGGATCATATGTTCTTCCCTTCGCTTGTGGTTGAATCCGACTCTAGCGAGGTAATTAAAGCTCTGATTGGCGATGAGGACGACAATTCAGA
AATTTCCTTGTTCATCGATGAAATCCGCGAGATGGCCCCTCTAGCCAACATCTCCATTTTCTCCAAATGTGCTAGACAGGAAAATGTGGGAGCGCAACTTTTGGCGCGAG
CGGGAGCGAATTTTGGTGTTTTTTCTTTTTTTGTGGGACGCAGCTTGTTCCTAGTGCTGGGCTTTTTGGACTATATTAGGAACTCTTCAGTTCACAGCTGGTTCTCTTCA
ATCATTAATGAAGAGATAGATGTAACTTCCCTTCCGTTTTTTTAA
Protein sequenceShow/hide protein sequence
MGEKRDRTPLRVKDGFKGKRVRSLLENDGSCNVRLVKEVFDDNEADLIINIPRGRMTKDDEIIWNQDSKGNFTVKSAYHLATNLESSNAPFTSVDSSSKTFWRSIWSLNC
APRVKIAVWKLLNDIVPTNGNICKKGIVTNLLCVFCRKKIESSEHLIWICNLSKGIWDYFLPNLHSFLISCMEELKMIDYWEGIIQKFNREDINKAATIMWSLWNERNRC
NSSGKYPNILRLKKQIINFSEVWGESRKTNLKISVLENQTSHRRWRHPDSGSWKLNVDATWCDKKKAGGVGWIIRDSNGSLIGAGYNQVFHKWEIKLLESKAIVEGVKAY
LRHANSEDHMFFPSLVVESDSSEVIKALIGDEDDNSEISLFIDEIREMAPLANISIFSKCARQENVGAQLLARAGANFGVFSFFVGRSLFLVLGFLDYIRNSSVHSWFSS
IINEEIDVTSLPFF