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Lag0013233 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013233
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionF-box protein
Genome locationchr1:48609205..48611687
RNA-Seq ExpressionLag0013233
SyntenyLag0013233
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585288.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia]7.2e-1578.95Show/hide
Query:  FDFYHFVVKSFFDLISPILVQSESQNSPAQILLQFARIHRLEIEFPTGDPKVDKVGG
        + F+  VVKSFFDLISPILVQSESQNSPAQIL QF RI RLEIEFPTGD KV+++GG
Subjt:  FDFYHFVVKSFFDLISPILVQSESQNSPAQILLQFARIHRLEIEFPTGDPKVDKVGG

XP_022951596.1 F-box protein At1g22220-like [Cucurbita moschata]7.2e-1578.95Show/hide
Query:  FDFYHFVVKSFFDLISPILVQSESQNSPAQILLQFARIHRLEIEFPTGDPKVDKVGG
        + F+  VVKSFFDLISPILVQSESQNSPAQIL QF RI RLEIEFPTGD KV+++GG
Subjt:  FDFYHFVVKSFFDLISPILVQSESQNSPAQILLQFARIHRLEIEFPTGDPKVDKVGG

XP_023002829.1 F-box protein At1g78100-like [Cucurbita maxima]7.2e-1578.95Show/hide
Query:  FDFYHFVVKSFFDLISPILVQSESQNSPAQILLQFARIHRLEIEFPTGDPKVDKVGG
        + F+  VVKSFFDLISPILVQSESQNSPAQIL QF RI RLEIEFPTGD KV+++GG
Subjt:  FDFYHFVVKSFFDLISPILVQSESQNSPAQILLQFARIHRLEIEFPTGDPKVDKVGG

XP_023537288.1 F-box protein At1g22220-like [Cucurbita pepo subsp. pepo]7.2e-1578.95Show/hide
Query:  FDFYHFVVKSFFDLISPILVQSESQNSPAQILLQFARIHRLEIEFPTGDPKVDKVGG
        + F+  VVKSFFDLISPILVQSESQNSPAQIL QF RI RLEIEFPTGD KV+++GG
Subjt:  FDFYHFVVKSFFDLISPILVQSESQNSPAQILLQFARIHRLEIEFPTGDPKVDKVGG

XP_038886087.1 F-box protein At1g22220 [Benincasa hispida]8.2e-1173.58Show/hide
Query:  FYHFVVKSFFDLISPILVQSESQNSPAQILLQFARIHRLEIEFPTGDPKVDKV
        F+  VVKSFF LIS +LVQSESQNSPAQIL QF +I RL+IEFPTGD KV++V
Subjt:  FYHFVVKSFFDLISPILVQSESQNSPAQILLQFARIHRLEIEFPTGDPKVDKV

TrEMBL top hitse value%identityAlignment
A0A0A0LN04 F-box domain-containing protein2.6e-1069.81Show/hide
Query:  FYHFVVKSFFDLISPILVQSESQNSPAQILLQFARIHRLEIEFPTGDPKVDKV
        F+  V+KSF DL+SPIL+QSESQNSPAQIL QF RI  L+IEFPT D KV++V
Subjt:  FYHFVVKSFFDLISPILVQSESQNSPAQILLQFARIHRLEIEFPTGDPKVDKV

A0A1S3BC00 F-box protein At1g222208.3e-0950.55Show/hide
Query:  FSGHLHRSYSPSLVFFILLSSPFHFLHDFNFNFNIHFDFYHFVVKSFFDLISPILVQSESQNSPAQILLQFARIHRLEIEFPTGDPKVDKV
        F+  +  S S SL    ++SS      D + N +    F+  VVKSF DL+SPILVQSE+QNSPAQIL QF +I  L+IEFPT D KV++V
Subjt:  FSGHLHRSYSPSLVFFILLSSPFHFLHDFNFNFNIHFDFYHFVVKSFFDLISPILVQSESQNSPAQILLQFARIHRLEIEFPTGDPKVDKV

A0A5A7VGI7 F-box protein8.3e-0950.55Show/hide
Query:  FSGHLHRSYSPSLVFFILLSSPFHFLHDFNFNFNIHFDFYHFVVKSFFDLISPILVQSESQNSPAQILLQFARIHRLEIEFPTGDPKVDKV
        F+  +  S S SL    ++SS      D + N +    F+  VVKSF DL+SPILVQSE+QNSPAQIL QF +I  L+IEFPT D KV++V
Subjt:  FSGHLHRSYSPSLVFFILLSSPFHFLHDFNFNFNIHFDFYHFVVKSFFDLISPILVQSESQNSPAQILLQFARIHRLEIEFPTGDPKVDKV

A0A6J1GI01 F-box protein At1g22220-like3.5e-1578.95Show/hide
Query:  FDFYHFVVKSFFDLISPILVQSESQNSPAQILLQFARIHRLEIEFPTGDPKVDKVGG
        + F+  VVKSFFDLISPILVQSESQNSPAQIL QF RI RLEIEFPTGD KV+++GG
Subjt:  FDFYHFVVKSFFDLISPILVQSESQNSPAQILLQFARIHRLEIEFPTGDPKVDKVGG

A0A6J1KRK0 F-box protein At1g78100-like3.5e-1578.95Show/hide
Query:  FDFYHFVVKSFFDLISPILVQSESQNSPAQILLQFARIHRLEIEFPTGDPKVDKVGG
        + F+  VVKSFFDLISPILVQSESQNSPAQIL QF RI RLEIEFPTGD KV+++GG
Subjt:  FDFYHFVVKSFFDLISPILVQSESQNSPAQILLQFARIHRLEIEFPTGDPKVDKVGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACCCTTAGCGAAATCGAGCAAAAAGAAACGGAGAAAAGCGGGGGGAAAGGAGAAGGCGAGAGATCTGCAAACGGATTGCAATGGCGAACGGAAAAGAGGGGGCTC
CGCTGGGCTTTCATTTCTTATCTACTTTTCTGGTCATCTCCATCGGTCTTATTCTCCATCTCTCGTCTTCTTCATTCTTCTGTCTTCTCCATTTCATTTCCTTCACGATT
TCAATTTCAATTTCAACATTCATTTTGATTTCTATCATTTTGTCGTCAAGTCGTTCTTCGATTTGATTTCCCCTATTCTCGTACAATCCGAGTCACAGAACTCTCCGGCG
CAAATCCTCCTCCAGTTCGCCCGAATCCACCGCCTCGAGATTGAGTTTCCAACAGGCGATCCCAAGGTCGACAAAGTCGGGGGGCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAACCCTTAGCGAAATCGAGCAAAAAGAAACGGAGAAAAGCGGGGGGAAAGGAGAAGGCGAGAGATCTGCAAACGGATTGCAATGGCGAACGGAAAAGAGGGGGCTC
CGCTGGGCTTTCATTTCTTATCTACTTTTCTGGTCATCTCCATCGGTCTTATTCTCCATCTCTCGTCTTCTTCATTCTTCTGTCTTCTCCATTTCATTTCCTTCACGATT
TCAATTTCAATTTCAACATTCATTTTGATTTCTATCATTTTGTCGTCAAGTCGTTCTTCGATTTGATTTCCCCTATTCTCGTACAATCCGAGTCACAGAACTCTCCGGCG
CAAATCCTCCTCCAGTTCGCCCGAATCCACCGCCTCGAGATTGAGTTTCCAACAGGCGATCCCAAGGTCGACAAAGTCGGGGGGCGTTAA
Protein sequenceShow/hide protein sequence
MEPLAKSSKKKRRKAGGKEKARDLQTDCNGERKRGGSAGLSFLIYFSGHLHRSYSPSLVFFILLSSPFHFLHDFNFNFNIHFDFYHFVVKSFFDLISPILVQSESQNSPA
QILLQFARIHRLEIEFPTGDPKVDKVGGR