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Lag0013244 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013244
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCYSTM domain-containing protein
Genome locationchr1:48709265..48710801
RNA-Seq ExpressionLag0013244
SyntenyLag0013244
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ERN18100.1 hypothetical protein AMTR_s00046p00231970 [Amborella trichopoda]4.5e-0468.29Show/hide
Query:  MSHTKYAYPYYGEGYYQGPPPPVVAPPQYAAAPPQGLGCLE
        MS  KYAYPY  +GYYQG  PPV+APPQYAA PP+  G LE
Subjt:  MSHTKYAYPYYGEGYYQGPPPPVVAPPQYAAAPPQGLGCLE

KAG6594919.1 hypothetical protein SDJN03_11472, partial [Cucurbita argyrosperma subsp. sororia]2.2e-1187.8Show/hide
Query:  SHTKYAYPYYGEGYYQGPPPPVVAPPQYAAAPPQGLGCLEA
        SH+KYAYPYY  GYYQGPPPPVVAPP YAAAPPQG GCLEA
Subjt:  SHTKYAYPYYGEGYYQGPPPPVVAPPQYAAAPPQGLGCLEA

KGN48678.1 hypothetical protein Csa_004171 [Cucumis sativus]1.7e-1190.7Show/hide
Query:  MSHTKYAYPYYGEGYYQG-PPPPVVAPPQYAAAPPQGLGCLEA
        MS  KYAYPYYGEGYYQG PPPPVVAPPQYAAAPPQG GCLEA
Subjt:  MSHTKYAYPYYGEGYYQG-PPPPVVAPPQYAAAPPQGLGCLEA

XP_020530606.1 uncharacterized protein LOC110008298 [Amborella trichopoda]4.5e-0468.29Show/hide
Query:  MSHTKYAYPYYGEGYYQGPPPPVVAPPQYAAAPPQGLGCLE
        MS  KYAYPY  +GYYQG  PPV+APPQYAA PP+  G LE
Subjt:  MSHTKYAYPYYGEGYYQGPPPPVVAPPQYAAAPPQGLGCLE

XP_028115108.1 uncharacterized protein LOC114312989 [Camellia sinensis]3.5e-0461.22Show/hide
Query:  MSHTKYAYPYYGEGYYQGPPPPVVAPPQYAAAPPQGL--GCLEAWSHSW
        M+  KYAYPY  +GYYQG  PPV+APPQY A PPQ    G LE W H W
Subjt:  MSHTKYAYPYYGEGYYQGPPPPVVAPPQYAAAPPQGL--GCLEAWSHSW

TrEMBL top hitse value%identityAlignment
A0A0A0KGL9 CYSTM domain-containing protein8.3e-1290.7Show/hide
Query:  MSHTKYAYPYYGEGYYQG-PPPPVVAPPQYAAAPPQGLGCLEA
        MS  KYAYPYYGEGYYQG PPPPVVAPPQYAAAPPQG GCLEA
Subjt:  MSHTKYAYPYYGEGYYQG-PPPPVVAPPQYAAAPPQGLGCLEA

A0A2N9ILQ7 Uncharacterized protein1.7e-0468.18Show/hide
Query:  MSHTKYAYPYYGEGYYQGPPPPVVAPPQYAAAPP-QGLGCLEAW
        MS  KYAYPY  +GYYQG  PPV+APPQYAAAPP +  G LE W
Subjt:  MSHTKYAYPYYGEGYYQGPPPPVVAPPQYAAAPP-QGLGCLEAW

A0A4P1QRG6 CYSTM domain-containing protein6.4e-0463.83Show/hide
Query:  MSHTKYAYPYYGEGYYQGPPPPVVAPPQYAAAPPQGL-----GCLEA
        MS  KYAYPY  +GYYQG  PPV+APPQYAA PP G      GCL A
Subjt:  MSHTKYAYPYYGEGYYQGPPPPVVAPPQYAAAPPQGL-----GCLEA

K4AFM7 Uncharacterized protein1.3e-0463.27Show/hide
Query:  MSHTKYAYPYYGEGYYQGP--PPPVVAPPQYAAAPP-QGLGCLEAWSHS
        M+  KYAYPY  +GYYQGP   PPV+APPQYAAAPP +    LEAW  S
Subjt:  MSHTKYAYPYYGEGYYQGP--PPPVVAPPQYAAAPP-QGLGCLEAWSHS

U5D7A4 CYSTM domain-containing protein2.2e-0468.29Show/hide
Query:  MSHTKYAYPYYGEGYYQGPPPPVVAPPQYAAAPPQGLGCLE
        MS  KYAYPY  +GYYQG  PPV+APPQYAA PP+  G LE
Subjt:  MSHTKYAYPYYGEGYYQGPPPPVVAPPQYAAAPPQGLGCLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G33660.1 unknown protein1.7e-0465.71Show/hide
Query:  MSHTKYAYPYYGEGYY-QGPPPPVVAPPQYAAAPP
        MS  KYAYPY   G Y QGPPPPV  PPQY   PP
Subjt:  MSHTKYAYPYYGEGYY-QGPPPPVVAPPQYAAAPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCATACCAAGTACGCTTATCCCTACTACGGTGAAGGTTACTATCAGGGGCCGCCGCCTCCGGTGGTGGCGCCGCCACAATATGCAGCCGCTCCTCCGCAGGGACT
GGGATGCTTGGAAGCTTGGAGTCATTCATGGCTTGCAGTCTTGCTGCGCTATGCTGCTGCTGTCTCGTTGACCAGTGGTGCTGGTGCTGTGACCCCTTGTGGCTGTTCGC
TTGCTAAGCTAGCCTTACTCTATTTTCATAACACTGATGACAGGGAGCAAAACGACGCTGCAATGCTGTCATGGTCACAAATGACAAACTCCAAATCCACCTGTCGTCGG
GATGTTAATCCCAACAAGGACTCCAATGAAAAACAGCAGGGGGCTCGCGAGCTAAAAACACTAACACTAGGCACAAGCCAAAAACCAGAAGATGAAGAAAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCCATACCAAGTACGCTTATCCCTACTACGGTGAAGGTTACTATCAGGGGCCGCCGCCTCCGGTGGTGGCGCCGCCACAATATGCAGCCGCTCCTCCGCAGGGACT
GGGATGCTTGGAAGCTTGGAGTCATTCATGGCTTGCAGTCTTGCTGCGCTATGCTGCTGCTGTCTCGTTGACCAGTGGTGCTGGTGCTGTGACCCCTTGTGGCTGTTCGC
TTGCTAAGCTAGCCTTACTCTATTTTCATAACACTGATGACAGGGAGCAAAACGACGCTGCAATGCTGTCATGGTCACAAATGACAAACTCCAAATCCACCTGTCGTCGG
GATGTTAATCCCAACAAGGACTCCAATGAAAAACAGCAGGGGGCTCGCGAGCTAAAAACACTAACACTAGGCACAAGCCAAAAACCAGAAGATGAAGAAAACTAG
Protein sequenceShow/hide protein sequence
MSHTKYAYPYYGEGYYQGPPPPVVAPPQYAAAPPQGLGCLEAWSHSWLAVLLRYAAAVSLTSGAGAVTPCGCSLAKLALLYFHNTDDREQNDAAMLSWSQMTNSKSTCRR
DVNPNKDSNEKQQGARELKTLTLGTSQKPEDEEN