; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0013249 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013249
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr1:48732377..48736882
RNA-Seq ExpressionLag0013249
SyntenyLag0013249
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2711776.1 hypothetical protein I3760_04G092800 [Carya illinoinensis]1.0e-3031.97Show/hide
Query:  RLPQFLQIRCWCHVKLNLDRLPTRLNLLLRNVICPRLCVLCNRFEEDSLHVFWRCKFVRRFWRSSKFCSLL-QLPSVLSVFDLFWEARDRLCCSEFEELV
        +LP+ ++I  W   +   ++LPT LNL  R+V+    CVLCN+  ED+ H  + C  VR  W    FC+ +  L S LS +DL   ARDR         V
Subjt:  RLPQFLQIRCWCHVKLNLDRLPTRLNLLLRNVICPRLCVLCNRFEEDSLHVFWRCKFVRRFWRSSKFCSLL-QLPSVLSVFDLFWEARDRLCCSEFEELV

Query:  VFLWLVWNTRNQWVWKGQSRSLSLDLCADAVCYVQSFRTTYVQSFRPMIPTENPPGVQRVRWQPPPSSVLKLNSDVAFLDDSGPAGAGCVLRDSSGRVLL
           W +W  RN+ +++  S   ++ +  +A+   + +   +      +    NP   + VRW PPPS  LKLN D A       AG G VLR+  G V++
Subjt:  VFLWLVWNTRNQWVWKGQSRSLSLDLCADAVCYVQSFRTTYVQSFRPMIPTENPPGVQRVRWQPPPSSVLKLNSDVAFLDDSGPAGAGCVLRDSSGRVLL

Query:  AASLPLPKCWDVDLAEAHAVLVGAHLAVNRGFRGFLLETDSLRVARLLQFVGDDISEVGLLVRQIHQLSSGNLWVGATHTPRDGNRVAHSLAQTAIASPF
        A S    +    +  EA A+L G  L V  G    +LETD L +   L    + +++   +++ I +L +    V   H  R GN+VAH LA+ A     
Subjt:  AASLPLPKCWDVDLAEAHAVLVGAHLAVNRGFRGFLLETDSLRVARLLQFVGDDISEVGLLVRQIHQLSSGNLWVGATHTPRDGNRVAHSLAQTAIASPF

Query:  DQIWVDVCRSSVVSLVCLD
          +W D C S V   + LD
Subjt:  DQIWVDVCRSSVVSLVCLD

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]2.6e-3130.36Show/hide
Query:  CW---SCRSRLPQFLQIRCWCHVKLNLDRLPTRLNLLLRNVICPRLCVLCNRFEEDSLHVFWRCKFVRRFWRSSKFCSLLQLPSVLSVFDLFWEARDRLC
        CW     +  +P  +++  W   +L LDRLPT  NL  R V     C  C R  EDS+H+FW CKF    W +SKF         LS F +  E+ + L 
Subjt:  CW---SCRSRLPQFLQIRCWCHVKLNLDRLPTRLNLLLRNVICPRLCVLCNRFEEDSLHVFWRCKFVRRFWRSSKFCSLLQLPSVLSVFDLFWEARDRLC

Query:  CSEFEELVVFLWLVWNTRNQWVWKGQSRS---LSLDLCADAVCYVQSFRTTYVQSFRPMIPTENPPGVQRVRWQPPPSSVLKLNSDVAFLDDSGPAGAGC
         ++FEEL V +W +WN RN   +   +++   + ++L   A  Y   FR        P+  T        + WQPP   + K+N+D +FL     AG G 
Subjt:  CSEFEELVVFLWLVWNTRNQWVWKGQSRS---LSLDLCADAVCYVQSFRTTYVQSFRPMIPTENPPGVQRVRWQPPPSSVLKLNSDVAFLDDSGPAGAGC

Query:  VLRDSSGRVLLAASLPLPKCWDVDLAEAHAVLVGAHLAVNRGFRGFLLETDSLRVARLLQFVGDDISEVGLLVRQIHQLSSGNLWVGATH-----TPRDG
        ++ +  G+V+ AA+  L     VD+AEA A + G  LA   G    L                +D+SE G +V     L + N W  + H       R+G
Subjt:  VLRDSSGRVLLAASLPLPKCWDVDLAEAHAVLVGAHLAVNRGFRGFLLETDSLRVARLLQFVGDDISEVGLLVRQIHQLSSGNLWVGATH-----TPRDG

Query:  NRVAHSLAQTAIASPFDQIWVDVCRSSVVSLVCLDC
        N+ AH LA+ A+      IW++     + S + ++C
Subjt:  NRVAHSLAQTAIASPFDQIWVDVCRSSVVSLVCLDC

XP_022150944.1 uncharacterized protein LOC111018973 [Momordica charantia]4.2e-2937.31Show/hide
Query:  VRRFWRSSKFCSLLQL-----PSVLSVFDLFWEARDRLCCSEFEELVVFLWLVWNTRNQWVWKGQSRSLSLDLCADAVCYVQSFRTTYVQSFRPMIPTEN
        +R  W+ SKF   L L      S +  F   W   D +       +VV LW +WN RNQ            DL + +  Y+Q ++     S   ++    
Subjt:  VRRFWRSSKFCSLLQL-----PSVLSVFDLFWEARDRLCCSEFEELVVFLWLVWNTRNQWVWKGQSRSLSLDLCADAVCYVQSFRTTYVQSFRPMIPTEN

Query:  PPGVQRVRWQPPPSSVLKLNSDVAFLDDSGPAGAGCVLRDSSGRVLLAASLPLPKCWDVDLAEAHAVLVGAHLAVNRGFRGFLLETDSLRVARLLQFVGD
        PP V    W+PP + +LK+N D AF  +S  AG G ++RDS+G V L A   L +  DVD  E  AV  G  LAV  GF  F +ETDSLR+  LL     
Subjt:  PPGVQRVRWQPPPSSVLKLNSDVAFLDDSGPAGAGCVLRDSSGRVLLAASLPLPKCWDVDLAEAHAVLVGAHLAVNRGFRGFLLETDSLRVARLLQFVGD

Query:  DISEVGLLVRQIHQ-LSSGNLWVGATHTPRDGNRVAHSLAQTAIASPFDQIWVDVCRSSVVSLVCLDC
        D SEVG+L   I   LSS    V  + T R+GN  AH LAQ A+ SP  QIWV+     + S++ +DC
Subjt:  DISEVGLLVRQIHQ-LSSGNLWVGATHTPRDGNRVAHSLAQTAIASPFDQIWVDVCRSSVVSLVCLDC

XP_023908235.1 uncharacterized protein LOC112019924 [Quercus suber]1.1e-2930.51Show/hide
Query:  RLPQFLQIRCW--CHVKLNLDRLPTRLNLLLRNVICPRLCVLCNRFEEDSLHVFWRCKFVRRFW----RSSKFCSLLQLPSVLSVFDLFWEARDRLCCSE
        R+P  +++  W  CH     D LPTR NL  + ++   LC LC   +E ++H  W C   +  W    R+ + C   QL  V  +  L     DRL  +E
Subjt:  RLPQFLQIRCW--CHVKLNLDRLPTRLNLLLRNVICPRLCVLCNRFEEDSLHVFWRCKFVRRFW----RSSKFCSLLQLPSVLSVFDLFWEARDRLCCSE

Query:  FEELVVFLWLVWNTRNQWVWKGQSRSLSLDLCADAVCYVQSFRTTYVQSFRPMIPTENPPGVQR-------VRWQPPPSSVLKLNSDVAFLDDSGPAGAG
         E  +V  WL+WN RN+ ++ G+       L   AV  ++ F     Q  +  +  +   GV R        RW PPP +V KLN D A  ++S  +G G
Subjt:  FEELVVFLWLVWNTRNQWVWKGQSRSLSLDLCADAVCYVQSFRTTYVQSFRPMIPTENPPGVQR-------VRWQPPPSSVLKLNSDVAFLDDSGPAGAG

Query:  CVLRDSSGRVLLAASLPLPKCWDVDLAEAHAVLVGAHLAVNRGFRGFLLETDSLRVARLLQFVGDDISEVGLLVRQIHQLSSGNLWVGATHTPRDGNRVA
         V+R+S+G V+ A ++  P     ++AE  A       A++ GF   ++E DS+   + +    D  S +G +V  I  L     W     T R+GNRVA
Subjt:  CVLRDSSGRVLLAASLPLPKCWDVDLAEAHAVLVGAHLAVNRGFRGFLLETDSLRVARLLQFVGDDISEVGLLVRQIHQLSSGNLWVGATHTPRDGNRVA

Query:  HSLAQTAIASPFDQIWVDVCRSSVVSLVCLD
          LA+ A     D  W++   S  V  V +D
Subjt:  HSLAQTAIASPFDQIWVDVCRSSVVSLVCLD

XP_030967655.1 uncharacterized protein LOC115988151 [Quercus lobata]3.2e-2929.94Show/hide
Query:  WSCRSRLPQFLQIRCWCHVKLNLDRLPTRLNLLLRNVICPRLCVLCNRFEEDSLHVFWRCKFVRRFWRSSKFCSLLQLPSVLSVFDLFWEARDRLCCSEF
        WS   ++PQ L+I  W   +L ++ LPT  NL  R + C   C LC+   E + H  + C   +  W     C +  L S     D+  +  D+   ++ 
Subjt:  WSCRSRLPQFLQIRCWCHVKLNLDRLPTRLNLLLRNVICPRLCVLCNRFEEDSLHVFWRCKFVRRFWRSSKFCSLLQLPSVLSVFDLFWEARDRLCCSEF

Query:  EELVVFLWLVWNTRNQWVWKGQSRSLSLDLCADAVCYVQSFRTTYVQSFRPMIPTENPPGVQRVRWQPPPSSVLKLNSDVAFLDDSGPAGAGCVLRDSSG
        E      W +W  RNQ ++                 +  + RT         +P  +PP    V WQ PP    K+N D A  DD  P+  G V+RD  G
Subjt:  EELVVFLWLVWNTRNQWVWKGQSRSLSLDLCADAVCYVQSFRTTYVQSFRPMIPTENPPGVQRVRWQPPPSSVLKLNSDVAFLDDSGPAGAGCVLRDSSG

Query:  RVLLAASLPLPKCWDVDLAEAHAVLVGAHLAVNRGFRGFLLETDSLRVARLLQFVGDDISEVGLLVRQIHQLSSGNLWVGATHTPRDGNRVAHSLAQTAI
         ++ A+S  L   +  +  EA A+  G  LA   G    L+E+D+L V + +    D  SE G +++ I  +SS   W    H  R GNR AH LA+ A 
Subjt:  RVLLAASLPLPKCWDVDLAEAHAVLVGAHLAVNRGFRGFLLETDSLRVARLLQFVGDDISEVGLLVRQIHQLSSGNLWVGATHTPRDGNRVAHSLAQTAI

Query:  ASPFDQIWVDVCRSSVVSLVCLDC
        +S   +IW D+C S V  ++  DC
Subjt:  ASPFDQIWVDVCRSSVVSLVCLDC

TrEMBL top hitse value%identityAlignment
A0A2N9ED81 Uncharacterized protein8.6e-2828.44Show/hide
Query:  WSCRSRLPQFLQIRCW--CHVKLNLDRLPTRLNLLLRNVICPRLCVLCNRFEEDSLHVFWRCKFVRRFWRSSKFCSLLQLPSVLSVFDLFWEARDRLCCS
        WS   ++P  ++   W  CH     + LPTR NL  R+VI    C  CN   E  LH  W+CK +R  W +  + S +     L+  +LF      L  +
Subjt:  WSCRSRLPQFLQIRCW--CHVKLNLDRLPTRLNLLLRNVICPRLCVLCNRFEEDSLHVFWRCKFVRRFWRSSKFCSLLQLPSVLSVFDLFWEARDRLCCS

Query:  EFEELVVFLWLVWNTRN-QWVWKGQSRSLSLDLCADAVCYVQSFRTTYVQSFRPMIPTENPPGVQ-RVRWQPPPSSVLKLNSDVAFLDDSGPAGAGCVLR
        E +      WL+W+ RN QW+     + + ++     + + Q F + ++ +      T  PP    +V W+PP     K N D AF ++S  AG G ++R
Subjt:  EFEELVVFLWLVWNTRN-QWVWKGQSRSLSLDLCADAVCYVQSFRTTYVQSFRPMIPTENPPGVQ-RVRWQPPPSSVLKLNSDVAFLDDSGPAGAGCVLR

Query:  DSSGRVLLAASLPLPKCWDVDLAEAHAVLVGAHLAVNRGFRGFLLETDSLRVARLLQFVGDDISEVGLLVRQIHQLSSGNLWVGATHTPRDGNRVAHSLA
        +  G V+ +    +P    V+  EA+A      L+ + G +   +E DSL +   L       S  G L+     L+   L V  TH  RDGN +AHS+A
Subjt:  DSSGRVLLAASLPLPKCWDVDLAEAHAVLVGAHLAVNRGFRGFLLETDSLRVARLLQFVGDDISEVGLLVRQIHQLSSGNLWVGATHTPRDGNRVAHSLA

Query:  QTAIASPFDQIWVDVCRSSVVSLVCLD
        + A  S   ++W++     +  ++C D
Subjt:  QTAIASPFDQIWVDVCRSSVVSLVCLD

A0A2N9J7Z5 Reverse transcriptase domain-containing protein9.5e-2728.05Show/hide
Query:  DRLPTRLNLLLRNVICPRLCVLCNRFEEDSLHVFWRCKFVRRFWRSSKFCSLLQLPSVLSVFDLFWEARDRLCCSEFEELVVFLWLVWNTRNQWVWKGQS
        + LP + NL+ R +     C  C    E  LH  W C F +  W S      LQ  +  S  DL+W A   +     E+  +  W +W  RN        
Subjt:  DRLPTRLNLLLRNVICPRLCVLCNRFEEDSLHVFWRCKFVRRFWRSSKFCSLLQLPSVLSVFDLFWEARDRLCCSEFEELVVFLWLVWNTRNQWVWKGQS

Query:  RSLSLDLCADAVCYVQSFRTTYVQSFRPM---IPTENPPGVQRVRWQPPPSSVLKLNSDVAFLDDSGPAGAGCVLRDSSGRVLLAASLPLPKCWDVDLAE
         SL +   AD    V    T  +Q F+ +   +P   PP     +W PPPS V K N D A   D   AG G ++R+  G  +   S  +     V++ E
Subjt:  RSLSLDLCADAVCYVQSFRTTYVQSFRPM---IPTENPPGVQRVRWQPPPSSVLKLNSDVAFLDDSGPAGAGCVLRDSSGRVLLAASLPLPKCWDVDLAE

Query:  AHAVLVGAHLAVNRGFRGFLLETDSLRVARLLQFVGDDISEVGLLVRQIHQLSSGNLWVGATHTPRDGNRVAHSLAQTAIASPFDQIWVDVCRSSVVSLV
        A A      LA + G +  + E DS  +   LQ     ++  G ++       +   W   +HT R GN VAH LA+ A        W+    SS++S +
Subjt:  AHAVLVGAHLAVNRGFRGFLLETDSLRVARLLQFVGDDISEVGLLVRQIHQLSSGNLWVGATHTPRDGNRVAHSLAQTAIASPFDQIWVDVCRSSVVSLV

Query:  CLD
         +D
Subjt:  CLD

A0A6J1DAR4 uncharacterized protein LOC1110189541.3e-3130.36Show/hide
Query:  CW---SCRSRLPQFLQIRCWCHVKLNLDRLPTRLNLLLRNVICPRLCVLCNRFEEDSLHVFWRCKFVRRFWRSSKFCSLLQLPSVLSVFDLFWEARDRLC
        CW     +  +P  +++  W   +L LDRLPT  NL  R V     C  C R  EDS+H+FW CKF    W +SKF         LS F +  E+ + L 
Subjt:  CW---SCRSRLPQFLQIRCWCHVKLNLDRLPTRLNLLLRNVICPRLCVLCNRFEEDSLHVFWRCKFVRRFWRSSKFCSLLQLPSVLSVFDLFWEARDRLC

Query:  CSEFEELVVFLWLVWNTRNQWVWKGQSRS---LSLDLCADAVCYVQSFRTTYVQSFRPMIPTENPPGVQRVRWQPPPSSVLKLNSDVAFLDDSGPAGAGC
         ++FEEL V +W +WN RN   +   +++   + ++L   A  Y   FR        P+  T        + WQPP   + K+N+D +FL     AG G 
Subjt:  CSEFEELVVFLWLVWNTRNQWVWKGQSRS---LSLDLCADAVCYVQSFRTTYVQSFRPMIPTENPPGVQRVRWQPPPSSVLKLNSDVAFLDDSGPAGAGC

Query:  VLRDSSGRVLLAASLPLPKCWDVDLAEAHAVLVGAHLAVNRGFRGFLLETDSLRVARLLQFVGDDISEVGLLVRQIHQLSSGNLWVGATH-----TPRDG
        ++ +  G+V+ AA+  L     VD+AEA A + G  LA   G    L                +D+SE G +V     L + N W  + H       R+G
Subjt:  VLRDSSGRVLLAASLPLPKCWDVDLAEAHAVLVGAHLAVNRGFRGFLLETDSLRVARLLQFVGDDISEVGLLVRQIHQLSSGNLWVGATH-----TPRDG

Query:  NRVAHSLAQTAIASPFDQIWVDVCRSSVVSLVCLDC
        N+ AH LA+ A+      IW++     + S + ++C
Subjt:  NRVAHSLAQTAIASPFDQIWVDVCRSSVVSLVCLDC

A0A6J1DBJ7 uncharacterized protein LOC1110189732.0e-2937.31Show/hide
Query:  VRRFWRSSKFCSLLQL-----PSVLSVFDLFWEARDRLCCSEFEELVVFLWLVWNTRNQWVWKGQSRSLSLDLCADAVCYVQSFRTTYVQSFRPMIPTEN
        +R  W+ SKF   L L      S +  F   W   D +       +VV LW +WN RNQ            DL + +  Y+Q ++     S   ++    
Subjt:  VRRFWRSSKFCSLLQL-----PSVLSVFDLFWEARDRLCCSEFEELVVFLWLVWNTRNQWVWKGQSRSLSLDLCADAVCYVQSFRTTYVQSFRPMIPTEN

Query:  PPGVQRVRWQPPPSSVLKLNSDVAFLDDSGPAGAGCVLRDSSGRVLLAASLPLPKCWDVDLAEAHAVLVGAHLAVNRGFRGFLLETDSLRVARLLQFVGD
        PP V    W+PP + +LK+N D AF  +S  AG G ++RDS+G V L A   L +  DVD  E  AV  G  LAV  GF  F +ETDSLR+  LL     
Subjt:  PPGVQRVRWQPPPSSVLKLNSDVAFLDDSGPAGAGCVLRDSSGRVLLAASLPLPKCWDVDLAEAHAVLVGAHLAVNRGFRGFLLETDSLRVARLLQFVGD

Query:  DISEVGLLVRQIHQ-LSSGNLWVGATHTPRDGNRVAHSLAQTAIASPFDQIWVDVCRSSVVSLVCLDC
        D SEVG+L   I   LSS    V  + T R+GN  AH LAQ A+ SP  QIWV+     + S++ +DC
Subjt:  DISEVGLLVRQIHQ-LSSGNLWVGATHTPRDGNRVAHSLAQTAIASPFDQIWVDVCRSSVVSLVCLDC

A0A803PVI9 Uncharacterized protein9.5e-2728.1Show/hide
Query:  LPQFLQIRCWCHVKLNLDRLPTRLNLLLRNVICPRLCVLCNRFEEDSLHVFWRCKFVRRFWRSSKFCSLLQLPSVLSVFDLFWEARDRLCCSEFEELVVF
        LP  ++I  W  +    D LPT   L  R++    +C+LC    E + H  + CK  R+ WR S F     +   +++ +L  +  D     + E+ +  
Subjt:  LPQFLQIRCWCHVKLNLDRLPTRLNLLLRNVICPRLCVLCNRFEEDSLHVFWRCKFVRRFWRSSKFCSLLQLPSVLSVFDLFWEARDRLCCSEFEELVVF

Query:  LWLVWNTRNQWVWKGQSRSLSLDLCADAVCYVQSFRTTYVQ--SFRPMIPTENPPGVQRVRWQPPPSSVLKLNSDVAFLDDSGPAGAGCVLRDSSGRVLL
        LWL+WN RN+     +++  +L L   A+ Y++ ++    +  +  P     N    Q   W  PP+  LKLN+D A    +   G G +LRDS+G ++ 
Subjt:  LWLVWNTRNQWVWKGQSRSLSLDLCADAVCYVQSFRTTYVQ--SFRPMIPTENPPGVQRVRWQPPPSSVLKLNSDVAFLDDSGPAGAGCVLRDSSGRVLL

Query:  AASLPLPKCWDVDLAEAHAVLVGAHLAVNRGFRGFLLETDSLRVARLLQFVGDDISEVGLLVRQIHQLSSGNLWVGATHTPRDGNRVAHSLAQTAIASPF
        A S P+   +  ++ EA A++      ++ G     +ETDSL VA+ LQ +   +S+   L+  I  L S    V   H  R  N  AH LA+ A++   
Subjt:  AASLPLPKCWDVDLAEAHAVLVGAHLAVNRGFRGFLLETDSLRVARLLQFVGDDISEVGLLVRQIHQLSSGNLWVGATHTPRDGNRVAHSLAQTAIASPF

Query:  DQIWVD
           W++
Subjt:  DQIWVD

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657507.0e-1125.45Show/hide
Query:  RNVICPRLCVLCNRFEEDSLHVFWRCKFVRRFW-------RSSKFCSLLQLPSVLSVFD-LFWEARDRLCCSEFEELVVFLWLVWNTRNQWVWKGQSRSL
        R++    +C +C    E  LHV   C      W       R   F S        S+F+ L+    DR  C +     +F  ++W     W WK +  ++
Subjt:  RNVICPRLCVLCNRFEEDSLHVFWRCKFVRRFW-------RSSKFCSLLQLPSVLSVFD-LFWEARDRLCCSEFEELVVFLWLVWNTRNQWVWKGQSRSL

Query:  --SLDLCADAVCYVQSFRTTY--VQSFRPMIPTENPPGVQRVRWQPPPSSVLKLNSDVAFLDDSGPAGAGCVLRDSSGRVLLAASLPLPKCWDVDLAEAH
              C D V +V+ +        S   ++    P   + + W  P    +K+N+D A   + G A AG VLRD +G      SL + +C     AE  
Subjt:  --SLDLCADAVCYVQSFRTTY--VQSFRPMIPTENPPGVQRVRWQPPPSSVLKLNSDVAFLDDSGPAGAGCVLRDSSGRVLLAASLPLPKCWDVDLAEAH

Query:  AVLVGAHLAVNRGFRGFLLETDSLRVARLLQFVGDDISEVGLLVRQIHQLSSGNLWVGATHTPRDGNRVAHSLAQTAIA
         V  G + A  +      LE DS  +   L+    D   +  LVR  H     +  V   H  R+ NR+A  LA  A +
Subjt:  AVLVGAHLAVNRGFRGFLLETDSLRVARLLQFVGDDISEVGLLVRQIHQLSSGNLWVGATHTPRDGNRVAHSLAQTAIA

Arabidopsis top hitse value%identityAlignment
AT3G25270.1 Ribonuclease H-like superfamily protein1.1e-1428.34Show/hide
Query:  KLNLDRLPTRLNLLLRNVICPRLCVLCNRFEEDSLHVFWRCKFVRRFWRSSKFCSLLQLP-SVLSVFDLFWEARDRLCCSE---------FEELVVFLWL
        KL    L T  NL  R++     C  C + +E S H+F+ C + ++ WR+S       +P   L    +  E +  L  S          F   +  LW 
Subjt:  KLNLDRLPTRLNLLLRNVICPRLCVLCNRFEEDSLHVFWRCKFVRRFWRSSKFCSLLQLP-SVLSVFDLFWEARDRLCCSE---------FEELVVFLWL

Query:  VWNTRNQWVWKGQSRSLSLDLCADAVCYVQSFR--TTYVQSFRPMIPT--ENPPGVQRVRWQPPPSSVLKLNSDVAFLDDSGPAGAGCVLRDSSGRVLLA
        +W +RNQ V++ +S S    L   A   VQ +    TYVQS    + +     P + R +WQ PPS+ +K N D AF   +  A AG ++RD +G  + +
Subjt:  VWNTRNQWVWKGQSRSLSLDLCADAVCYVQSFR--TTYVQSFRPMIPT--ENPPGVQRVRWQPPPSSVLKLNSDVAFLDDSGPAGAGCVLRDSSGRVLLA

Query:  ASLPLPKCWDVDLAEAHAVLVGAHLAVNRGFRGFLLETDSLRVARLL
                 D   +E  A+++    A ++G+R  + E DS +V  L+
Subjt:  ASLPLPKCWDVDLAEAHAVLVGAHLAVNRGFRGFLLETDSLRVARLL

AT4G09490.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.3e-0435.56Show/hide
Query:  LGAEAEAVLQGLQLARSLRVSRLLVMSDPLNLIKSINEEIEGDSCIASTMWDIQEIRLNFTKVTFNFVSRRFNGIAHSLACAGLYSPSFL
        L AEA A+   LQ A+S+ +++L + SD   LI +I  E          ++DI  + L F  V+F+FV R  N +A  LA + L S S +
Subjt:  LGAEAEAVLQGLQLARSLRVSRLLVMSDPLNLIKSINEEIEGDSCIASTMWDIQEIRLNFTKVTFNFVSRRFNGIAHSLACAGLYSPSFL

AT4G29090.1 Ribonuclease H-like superfamily protein1.0e-1224.29Show/hide
Query:  TTPMCSGFCWSCRSRLPQFLQIRCWCHVKLNLDRLPTRLNLLLRNVICPRLCVLCNRFEEDSLHVFWRCKFVRRFWRSSKFCSLLQLPSVLSVF-DLFWE
        T+P    F W C S                  + LP    L  R++     C+ C   +E   H+ ++C F R  W  S     L      S++ +L+W 
Subjt:  TTPMCSGFCWSCRSRLPQFLQIRCWCHVKLNLDRLPTRLNLLLRNVICPRLCVLCNRFEEDSLHVFWRCKFVRRFWRSSKFCSLLQLPSVLSVF-DLFWE

Query:  ---ARDRLCCSEFEELVVF-LWLVWNTRNQWVWKGQSRSLSLDLCADAVCYVQSFRTTYVQSFRPMIPTENPPGVQRVRWQPPPSSVLKLNSDVAFLDDS
                   +  +LV + LW +W  RN+ V++G+  + + ++   A   ++ +R           P  N       RW+PPP   +K N+D  +  D+
Subjt:  ---ARDRLCCSEFEELVVF-LWLVWNTRNQWVWKGQSRSLSLDLCADAVCYVQSFRTTYVQSFRPMIPTENPPGVQRVRWQPPPSSVLKLNSDVAFLDDS

Query:  GPAGAGCVLRDSSGRVLLAASLPLPKCWDVDLAEAHAVLVGAHLAVNR-GFRGFLLETDSLRVARLLQFVGDDI-SEVGLLVRQIHQLSSGNLWVGATHT
           G G VLR+  G V    +  LPK   V  AE  A +  A L+++R  +   + E+DS  +  +L    D+I   +   ++ + +L S    V     
Subjt:  GPAGAGCVLRDSSGRVLLAASLPLPKCWDVDLAEAHAVLVGAHLAVNR-GFRGFLLETDSLRVARLLQFVGDDI-SEVGLLVRQIHQLSSGNLWVGATHT

Query:  PRDGNRVAHSLAQTAIA
        PR+GN +A  +A+ +++
Subjt:  PRDGNRVAHSLAQTAIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGGATAGATCGGGTCAAATACAGACTGCTCATGCATTGATCTCTTCAGTTTCTACTTCGTCGTTAGGGGCGGAAGCGGAGGCAGTGTTACAAGGGCTTCAACTAGC
CAGATCTTTGAGAGTTAGTCGGTTATTGGTTATGTCTGATCCTCTGAATCTGATTAAATCGATAAATGAGGAGATTGAAGGTGATTCATGCATTGCTTCCACTATGTGGG
ATATCCAGGAGATTCGATTGAACTTCACCAAGGTGACCTTTAACTTTGTTAGTAGAAGATTCAATGGCATAGCCCATTCATTGGCTTGTGCAGGTCTTTATTCCCCTTCC
TTTTTATGGTTGGGTAGCTATCCTGAATGGATAGAAAATTTGTCGCTCCAAGAAGGATGTCTGTTTGTGATTTTGGACCACACAGATGGACAAGGAGCTGAGGAGGATAA
TCGGGCAGATGTAGGACCAAAAGACCGACCCAGAGGAAGACCGAACCAAAGGGTCGGGCCAAAATGGCCCGACCATTTGGCCCGTTTGCGCAGGCCGAGCCCGATGACCT
CTTTTCGGTCCCTGATGCCCCGAATCGCCTCGGTTCCGCCTGGTTCGCCCCGAAACACCACCGAATTCCTAAAAACCCTAGGAGGACAAACAGCTTCTCCTCGGTTTTCT
GACTTAGGCATCGGAGGCGGTGTGGCCTACACCACGCCGATGTGCAGCGGTTTTTGCTGGTCTTGCAGGTCACGTCTTCCCCAATTTCTACAAATTCGTTGTTGGTGTCA
CGTGAAGCTTAATCTTGACCGTCTTCCAACTCGCTTAAATTTGTTGTTGAGGAATGTTATTTGCCCGCGCTTGTGTGTTCTTTGTAATCGGTTTGAGGAGGATAGTCTCC
ATGTGTTTTGGCGATGTAAGTTTGTTCGTCGATTTTGGCGTTCTTCTAAGTTTTGTTCTCTTCTCCAATTGCCATCAGTGTTGTCTGTTTTTGATTTGTTTTGGGAGGCT
CGGGATCGTCTTTGTTGCTCTGAGTTTGAGGAGTTGGTTGTCTTTCTTTGGCTGGTTTGGAATACTCGAAATCAGTGGGTTTGGAAGGGTCAGTCTCGAAGCCTAAGTTT
GGATCTTTGCGCTGATGCTGTATGTTATGTTCAATCATTTAGAACTACTTATGTGCAGAGTTTTCGACCGATGATTCCTACTGAGAATCCTCCTGGTGTTCAGCGTGTCC
GATGGCAGCCACCGCCTAGCTCTGTTCTGAAATTAAATTCTGACGTTGCTTTCCTAGATGACTCGGGTCCAGCTGGGGCTGGTTGTGTTCTTAGAGATTCGAGTGGGAGA
GTTTTGTTGGCTGCTTCTCTTCCATTACCGAAATGCTGGGATGTGGATCTAGCGGAAGCTCATGCTGTTTTAGTCGGTGCCCATTTGGCCGTCAATCGGGGTTTTCGCGG
TTTCTTGCTTGAGACTGATTCGCTTCGAGTTGCTCGCCTTCTTCAATTTGTTGGTGATGATATTTCTGAGGTGGGTCTGCTTGTTCGGCAAATTCACCAGCTTTCGTCTG
GTAATCTTTGGGTGGGAGCGACTCATACTCCACGTGATGGCAATCGGGTTGCTCATTCTCTTGCTCAAACTGCTATTGCTTCTCCTTTTGATCAAATCTGGGTTGATGTT
TGTCGCAGTTCTGTTGTTTCTTTGGTTTGTTTAGATTGCCCCGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGGGATAGATCGGGTCAAATACAGACTGCTCATGCATTGATCTCTTCAGTTTCTACTTCGTCGTTAGGGGCGGAAGCGGAGGCAGTGTTACAAGGGCTTCAACTAGC
CAGATCTTTGAGAGTTAGTCGGTTATTGGTTATGTCTGATCCTCTGAATCTGATTAAATCGATAAATGAGGAGATTGAAGGTGATTCATGCATTGCTTCCACTATGTGGG
ATATCCAGGAGATTCGATTGAACTTCACCAAGGTGACCTTTAACTTTGTTAGTAGAAGATTCAATGGCATAGCCCATTCATTGGCTTGTGCAGGTCTTTATTCCCCTTCC
TTTTTATGGTTGGGTAGCTATCCTGAATGGATAGAAAATTTGTCGCTCCAAGAAGGATGTCTGTTTGTGATTTTGGACCACACAGATGGACAAGGAGCTGAGGAGGATAA
TCGGGCAGATGTAGGACCAAAAGACCGACCCAGAGGAAGACCGAACCAAAGGGTCGGGCCAAAATGGCCCGACCATTTGGCCCGTTTGCGCAGGCCGAGCCCGATGACCT
CTTTTCGGTCCCTGATGCCCCGAATCGCCTCGGTTCCGCCTGGTTCGCCCCGAAACACCACCGAATTCCTAAAAACCCTAGGAGGACAAACAGCTTCTCCTCGGTTTTCT
GACTTAGGCATCGGAGGCGGTGTGGCCTACACCACGCCGATGTGCAGCGGTTTTTGCTGGTCTTGCAGGTCACGTCTTCCCCAATTTCTACAAATTCGTTGTTGGTGTCA
CGTGAAGCTTAATCTTGACCGTCTTCCAACTCGCTTAAATTTGTTGTTGAGGAATGTTATTTGCCCGCGCTTGTGTGTTCTTTGTAATCGGTTTGAGGAGGATAGTCTCC
ATGTGTTTTGGCGATGTAAGTTTGTTCGTCGATTTTGGCGTTCTTCTAAGTTTTGTTCTCTTCTCCAATTGCCATCAGTGTTGTCTGTTTTTGATTTGTTTTGGGAGGCT
CGGGATCGTCTTTGTTGCTCTGAGTTTGAGGAGTTGGTTGTCTTTCTTTGGCTGGTTTGGAATACTCGAAATCAGTGGGTTTGGAAGGGTCAGTCTCGAAGCCTAAGTTT
GGATCTTTGCGCTGATGCTGTATGTTATGTTCAATCATTTAGAACTACTTATGTGCAGAGTTTTCGACCGATGATTCCTACTGAGAATCCTCCTGGTGTTCAGCGTGTCC
GATGGCAGCCACCGCCTAGCTCTGTTCTGAAATTAAATTCTGACGTTGCTTTCCTAGATGACTCGGGTCCAGCTGGGGCTGGTTGTGTTCTTAGAGATTCGAGTGGGAGA
GTTTTGTTGGCTGCTTCTCTTCCATTACCGAAATGCTGGGATGTGGATCTAGCGGAAGCTCATGCTGTTTTAGTCGGTGCCCATTTGGCCGTCAATCGGGGTTTTCGCGG
TTTCTTGCTTGAGACTGATTCGCTTCGAGTTGCTCGCCTTCTTCAATTTGTTGGTGATGATATTTCTGAGGTGGGTCTGCTTGTTCGGCAAATTCACCAGCTTTCGTCTG
GTAATCTTTGGGTGGGAGCGACTCATACTCCACGTGATGGCAATCGGGTTGCTCATTCTCTTGCTCAAACTGCTATTGCTTCTCCTTTTGATCAAATCTGGGTTGATGTT
TGTCGCAGTTCTGTTGTTTCTTTGGTTTGTTTAGATTGCCCCGTGTAA
Protein sequenceShow/hide protein sequence
MRDRSGQIQTAHALISSVSTSSLGAEAEAVLQGLQLARSLRVSRLLVMSDPLNLIKSINEEIEGDSCIASTMWDIQEIRLNFTKVTFNFVSRRFNGIAHSLACAGLYSPS
FLWLGSYPEWIENLSLQEGCLFVILDHTDGQGAEEDNRADVGPKDRPRGRPNQRVGPKWPDHLARLRRPSPMTSFRSLMPRIASVPPGSPRNTTEFLKTLGGQTASPRFS
DLGIGGGVAYTTPMCSGFCWSCRSRLPQFLQIRCWCHVKLNLDRLPTRLNLLLRNVICPRLCVLCNRFEEDSLHVFWRCKFVRRFWRSSKFCSLLQLPSVLSVFDLFWEA
RDRLCCSEFEELVVFLWLVWNTRNQWVWKGQSRSLSLDLCADAVCYVQSFRTTYVQSFRPMIPTENPPGVQRVRWQPPPSSVLKLNSDVAFLDDSGPAGAGCVLRDSSGR
VLLAASLPLPKCWDVDLAEAHAVLVGAHLAVNRGFRGFLLETDSLRVARLLQFVGDDISEVGLLVRQIHQLSSGNLWVGATHTPRDGNRVAHSLAQTAIASPFDQIWVDV
CRSSVVSLVCLDCPV