CuGenDBv2

Gene ID	Lag0013265
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	TPR_REGION domain-containing protein
Genome location	chr1:48850731..48851363
RNA-Seq Expression	Lag0013265
Synteny	Lag0013265
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR001440 - Tetratricopeptide repeat 1 IPR011990 - Tetratricopeptide-like helical domain superfamily IPR019734 - Tetratricopeptide repeat

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6604067.1 hypothetical protein SDJN03_04676, partial [Cucurbita argyrosperma subsp. sororia]

9.6e-96

92.38

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Query:  MSPEAMIQVALFILTAATMFAVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSTSQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDH
        MSPEAMIQVALFILTAATM AVRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARSTSQQSQS+DYAKKAL EAETALSLSPRDPASHILKALAL+H
Subjt:  MSPEAMIQVALFILTAATMFAVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSTSQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDH

Query:  MGHQSSALKSLDVALSPPCLKSLSEKELAKALIKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESG
        MGH SSALKSLDVALSPPCLKSLSEKE+AKAL+KRAELKIAVNRKRRLDSAVEDLL+AVSL GDD+KAFCLLGQCYEWK+MKDEARQAFEKALTVDPES 
Subjt:  MGHQSSALKSLDVALSPPCLKSLSEKELAKALIKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESG

Query:  PAREGLDRLN
        PARE L RLN
Subjt:  PAREGLDRLN

XP_022132455.1 uncharacterized protein LOC111005306 [Momordica charantia]

4.0e-94

90.95

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Query:  MSPEAMIQVALFILTAATMFAVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSTSQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDH
        MSPEAMIQVALFILTAAT+ AVRELSKRAFGKVR KNRAILQSSRHFFEGTHLLARARSTSQQSQS DYAKKAL EAETALSLSP+DPASHILKALALDH
Subjt:  MSPEAMIQVALFILTAATMFAVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSTSQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDH

Query:  MGHQSSALKSLDVALSPPCLKSLSEKELAKALIKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESG
        MGHQSSALKSLDVALSPPCLKSLS +EL KALIKRAELKIAVNRKRRLDSAVEDLLEAV L   D K FCLLGQCYEWK+MKDEA+QAFEKALTVDPES 
Subjt:  MGHQSSALKSLDVALSPPCLKSLSEKELAKALIKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESG

Query:  PAREGLDRLN
        PAREGL+RLN
Subjt:  PAREGLDRLN

XP_022950520.1 uncharacterized protein LOC111453603 [Cucurbita moschata]

9.6e-96

92.38

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Query:  MSPEAMIQVALFILTAATMFAVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSTSQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDH
        MSPEAMIQVALFILTAATM AVRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARSTSQQSQS+DYAKKAL EAETALSLSPRDPASHILKALAL+H
Subjt:  MSPEAMIQVALFILTAATMFAVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSTSQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDH

Query:  MGHQSSALKSLDVALSPPCLKSLSEKELAKALIKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESG
        MGH SSALKSLDVALSPPCLKSLSEKE+AKAL+KRAELKIAVNRKRRLDSAVEDLL+AVSL GDD+KAFCLLGQCYEWK+MKDEARQAFEKALTVDPES 
Subjt:  MGHQSSALKSLDVALSPPCLKSLSEKELAKALIKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESG

Query:  PAREGLDRLN
        PARE L RLN
Subjt:  PAREGLDRLN

XP_022978825.1 uncharacterized protein LOC111478668 [Cucurbita maxima]

4.0e-94

90.48

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Query:  MSPEAMIQVALFILTAATMFAVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSTSQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDH
        MSPEA+IQVALFILTAATM AVRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARS SQQSQS+DYAKKA+ EAETALSLSPRDPASHILKALAL+H
Subjt:  MSPEAMIQVALFILTAATMFAVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSTSQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDH

Query:  MGHQSSALKSLDVALSPPCLKSLSEKELAKALIKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESG
        MGH SSALKSLD+ALSPPCLKSLSEKE+AKAL+KRAELKIAVNRKRRLDSAVEDLL+AVSL GDD+KAFCLLGQCYEWK+MKDEARQAFEKALTVDPES 
Subjt:  MGHQSSALKSLDVALSPPCLKSLSEKELAKALIKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESG

Query:  PAREGLDRLN
        PARE L RLN
Subjt:  PAREGLDRLN

XP_023543662.1 uncharacterized protein LOC111803474 [Cucurbita pepo subsp. pepo]

1.6e-95

91.9

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Query:  MSPEAMIQVALFILTAATMFAVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSTSQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDH
        +SPEAMIQVALFILTAATM AVRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARSTSQQSQS+DYAKKAL EAETALSLSPRDPASHILKALAL+H
Subjt:  MSPEAMIQVALFILTAATMFAVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSTSQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDH

Query:  MGHQSSALKSLDVALSPPCLKSLSEKELAKALIKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESG
        MGHQSSALKSLDVALSPPCLKSLSEKE+AKAL+KRAELKIAVNRKRRLDSAVEDLL+AVSL GDD+KAFCLLGQCYEWK+MKDEAR+AFEKALTVDPES 
Subjt:  MGHQSSALKSLDVALSPPCLKSLSEKELAKALIKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESG

Query:  PAREGLDRLN
        PARE L RLN
Subjt:  PAREGLDRLN

TrEMBL top hits

e value

%identity

Alignment

A0A5E4EZ55 PREDICTED

8.0e-64

63.68

Show/hide

Query:  MSPEAMIQVALFILTAATMFAVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSTSQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDH
        M+PE ++Q+ L ILT A  FA+ ++S++A  K+R  NRA LQS+RHF +G+HLL RARS   ++QS  +AK AL EAE AL+LSPRDP  HILKALALD 
Subjt:  MSPEAMIQVALFILTAATMFAVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSTSQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDH

Query:  MGHQSSALKSLDVALSPPCLKSLSEKELAKALIKRAELKIAVNRKRRLDSAVEDLLEAVSL---VGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDP
        +GH++SALKS DVALSPPC+KSLSE+E  +AL+KRAELKI +NR+RR+DSAVEDL++AV L    GDD  +FCLLGQCYEWK MK+EAR+AFE+AL  +P
Subjt:  MGHQSSALKSLDVALSPPCLKSLSEKELAKALIKRAELKIAVNRKRRLDSAVEDLLEAVSL---VGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDP

Query:  ESGPAREGLDRL
         S  AR+GLDRL
Subjt:  ESGPAREGLDRL

A0A6J1BSI1 uncharacterized protein LOC111005306

2.0e-94

90.95

Show/hide

Query:  MSPEAMIQVALFILTAATMFAVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSTSQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDH
        MSPEAMIQVALFILTAAT+ AVRELSKRAFGKVR KNRAILQSSRHFFEGTHLLARARSTSQQSQS DYAKKAL EAETALSLSP+DPASHILKALALDH
Subjt:  MSPEAMIQVALFILTAATMFAVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSTSQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDH

Query:  MGHQSSALKSLDVALSPPCLKSLSEKELAKALIKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESG
        MGHQSSALKSLDVALSPPCLKSLS +EL KALIKRAELKIAVNRKRRLDSAVEDLLEAV L   D K FCLLGQCYEWK+MKDEA+QAFEKALTVDPES 
Subjt:  MGHQSSALKSLDVALSPPCLKSLSEKELAKALIKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESG

Query:  PAREGLDRLN
        PAREGL+RLN
Subjt:  PAREGLDRLN

A0A6J1GFZ7 uncharacterized protein LOC111453603

4.7e-96

92.38

Show/hide

Query:  MSPEAMIQVALFILTAATMFAVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSTSQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDH
        MSPEAMIQVALFILTAATM AVRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARSTSQQSQS+DYAKKAL EAETALSLSPRDPASHILKALAL+H
Subjt:  MSPEAMIQVALFILTAATMFAVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSTSQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDH

Query:  MGHQSSALKSLDVALSPPCLKSLSEKELAKALIKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESG
        MGH SSALKSLDVALSPPCLKSLSEKE+AKAL+KRAELKIAVNRKRRLDSAVEDLL+AVSL GDD+KAFCLLGQCYEWK+MKDEARQAFEKALTVDPES 
Subjt:  MGHQSSALKSLDVALSPPCLKSLSEKELAKALIKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESG

Query:  PAREGLDRLN
        PARE L RLN
Subjt:  PAREGLDRLN

A0A6J1IRB2 uncharacterized protein LOC111478668

2.0e-94

90.48

Show/hide

Query:  MSPEAMIQVALFILTAATMFAVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSTSQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDH
        MSPEA+IQVALFILTAATM AVRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARS SQQSQS+DYAKKA+ EAETALSLSPRDPASHILKALAL+H
Subjt:  MSPEAMIQVALFILTAATMFAVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSTSQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDH

Query:  MGHQSSALKSLDVALSPPCLKSLSEKELAKALIKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESG
        MGH SSALKSLD+ALSPPCLKSLSEKE+AKAL+KRAELKIAVNRKRRLDSAVEDLL+AVSL GDD+KAFCLLGQCYEWK+MKDEARQAFEKALTVDPES 
Subjt:  MGHQSSALKSLDVALSPPCLKSLSEKELAKALIKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESG

Query:  PAREGLDRLN
        PARE L RLN
Subjt:  PAREGLDRLN

A0A6J5V4N0 TPR_REGION domain-containing protein

2.1e-64

64.15

Show/hide

Query:  MSPEAMIQVALFILTAATMFAVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSTSQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDH
        M+PE ++Q+ L ILT A  FA+ ++S++A  K+R  NRA LQS+RHF +G+HLL RARS   ++QS  +AK AL EAE AL+LSPRDP  HILKALALD 
Subjt:  MSPEAMIQVALFILTAATMFAVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSTSQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDH

Query:  MGHQSSALKSLDVALSPPCLKSLSEKELAKALIKRAELKIAVNRKRRLDSAVEDLLEAVSL---VGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDP
        +GH++SALKS DVALSPPC+KSLSE+E  +AL+KRAELKI +NR+RR+DSAVEDL++AVSL    GDD  +FCLLGQCYEWK MK+EAR+AFE+AL  +P
Subjt:  MGHQSSALKSLDVALSPPCLKSLSEKELAKALIKRAELKIAVNRKRRLDSAVEDLLEAVSL---VGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDP

Query:  ESGPAREGLDRL
         S  AR+GLDRL
Subjt:  ESGPAREGLDRL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G65520.1 Tetratricopeptide repeat (TPR)-like superfamily protein

7.4e-46

52.53

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Query:  EAMIQVALFILTAATMFAVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSTSQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGH
        E +IQ A+ +LT    +A++ LS+R   K R K+RA LQ+ R   + + LLARAR+T ++SQS   AK AL EA+  +++SP D A HI++ALALD +GH
Subjt:  EAMIQVALFILTAATMFAVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSTSQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGH

Query:  QSSALKSLDVALSPPCLKSLSEKELAKALIKRAELKIAVNRKRRLDSAVEDLLEAVSLVG--DDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPES
         +SALKS D+AL+ P LKSLS  E A AL+KRAE+K+AVNR+RR+DSAVEDL EAV L    D ++ F LLG+CYE+K +K++A+ AF +AL   P S
Subjt:  QSSALKSLDVALSPPCLKSLSEKELAKALIKRAELKIAVNRKRRLDSAVEDLLEAVSLVG--DDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPES

Sequences

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CDS sequence

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ATGTCGCCGGAAGCCATGATACAAGTAGCTCTGTTCATCCTCACGGCAGCAACGATGTTCGCCGTACGAGAACTTTCCAAACGAGCATTCGGCAAGGTCCGCCATAAGAA
TCGCGCGATCCTCCAATCGAGCCGCCACTTCTTCGAGGGAACTCATCTACTCGCTCGAGCGCGATCAACTTCTCAACAATCTCAATCGATCGACTACGCGAAGAAGGCAC
TAATCGAAGCCGAAACGGCGCTTTCCCTTTCCCCAAGAGATCCGGCATCTCACATCTTGAAAGCCCTAGCCCTAGATCACATGGGCCACCAGAGCTCCGCTCTTAAATCA
CTAGACGTTGCACTTTCTCCGCCGTGCTTGAAGTCACTATCAGAGAAAGAACTTGCAAAGGCGTTGATTAAGAGAGCCGAATTGAAGATTGCCGTCAACCGGAAAAGGCG
ACTCGACTCGGCGGTGGAAGACTTGTTAGAGGCGGTGAGTTTGGTCGGAGATGACTCGAAGGCCTTCTGTTTGTTGGGTCAATGTTACGAGTGGAAGGAAATGAAAGATG
AGGCCCGGCAGGCTTTCGAGAAGGCTCTAACCGTGGATCCTGAATCAGGCCCGGCCCGCGAGGGATTGGACCGGTTGAATTGA

mRNA sequence

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Protein sequence

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MSPEAMIQVALFILTAATMFAVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSTSQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQSSALKS
LDVALSPPCLKSLSEKELAKALIKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESGPAREGLDRLN

Lag0013265 (gene) of Sponge gourd (AG-4) v1 genome