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Lag0013286 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013286
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionvegetative cell wall protein gp1-like
Genome locationchr1:49042462..49042962
RNA-Seq ExpressionLag0013286
SyntenyLag0013286
Gene Ontology termsNA
InterPro domainsIPR044959 - Classical arabinogalactan protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036330.1 hypothetical protein E6C27_scaffold18G001290 [Cucumis melo var. makuwa]4.5e-4878.92Show/hide
Query:  MGFSGLRLVVIFALLTVSCMAQAPAPAPGSSQPLPPPPATPAPAPVVFPPSPTPAPNRGSSPSPAPASPSPAPEAPSPAPAAPTPAPATSAPTPAPSSSP
        MGFSG+R VVIFALLT  CMAQAP PAPGS QPL PP ATPAP+PVV PPSPTP PNR  SPSP P SPSPAP+APSPAP  P PAPA  APTP P S+P
Subjt:  MGFSGLRLVVIFALLTVSCMAQAPAPAPGSSQPLPPPPATPAPAPVVFPPSPTPAPNRGSSPSPAPASPSPAPEAPSPAPAAPTPAPATSAPTPAPSSSP

Query:  TPSGSPAGGPVVPPIASPPSPIGGEVPSPAPQAPPADNPAGAASHVGGAAALGIALAGTLFAVVLA
        TPS    GGPVVPPIASPPSP G EVPSPAPQ PPADNPAGAASH+GGAA LGIALAGTLFAV+L+
Subjt:  TPSGSPAGGPVVPPIASPPSPIGGEVPSPAPQAPPADNPAGAASHVGGAAALGIALAGTLFAVVLA

XP_022950235.1 vegetative cell wall protein gp1-like [Cucurbita moschata]1.8e-3667.6Show/hide
Query:  MGFSGLRLVVIFALLTVSCMAQAPAPAPG----SSQPLPPPPATPAPAPVVFPPSPTPAPNRGSSPSPAPASPSPAPEAPSPAPA---------APTPAP
        MG SG+RLVVIFAL+ + C AQAPAP P     S +P+PP PATPAP+PV FPPSP+ +P R  SPSP  ASPSPA EAPSPAP+         APTP+P
Subjt:  MGFSGLRLVVIFALLTVSCMAQAPAPAPG----SSQPLPPPPATPAPAPVVFPPSPTPAPNRGSSPSPAPASPSPAPEAPSPAPA---------APTPAP

Query:  ATSAPTPAPSSSPTPSGSPAGGPVVPPIASPPSPIGGEVPSPAPQAPPADNPAGAASHVGGAAALGIALAGTLFAVVLA
        ATSAPTPAPSS P PSGSPAG PVVPPIASPPSP   + PSP P+AP AD+PAGAASH+GGA  LGIA+AGTL A+V+A
Subjt:  ATSAPTPAPSSSPTPSGSPAGGPVVPPIASPPSPIGGEVPSPAPQAPPADNPAGAASHVGGAAALGIALAGTLFAVVLA

XP_022978568.1 vegetative cell wall protein gp1-like [Cucurbita maxima]2.5e-3869.71Show/hide
Query:  MGFSGLRLVVIFALLTVSCMAQAPAPAPGSSQPLPPPPATPAPAPVVFPPSPTPAPNRGSSPSPAPASPSPAPEAPSPAPA---------APTPAPATSA
        MGFSG+RLVVIFAL+ + C AQAPAPA  S +P+PP PATPAP+PV FPPSP+ +P R  SPSP  ASPSPA EAPSPAP+         APTP+PATSA
Subjt:  MGFSGLRLVVIFALLTVSCMAQAPAPAPGSSQPLPPPPATPAPAPVVFPPSPTPAPNRGSSPSPAPASPSPAPEAPSPAPA---------APTPAPATSA

Query:  PTPAPSSSPTPSGSPAGGPVVPPIASPPSPIGGEVPSPAPQAPPADNPAGAASHVGGAAALGIALAGTLFAVVLA
        PTPAPSS P PSGSPAG PVVPPIASPPSP   + PSP P+AP AD+PAGAASH+GGA  LGIA+AGTL A+V+A
Subjt:  PTPAPSSSPTPSGSPAGGPVVPPIASPPSPIGGEVPSPAPQAPPADNPAGAASHVGGAAALGIALAGTLFAVVLA

XP_023544207.1 vegetative cell wall protein gp1-like [Cucurbita pepo subsp. pepo]5.5e-3868.72Show/hide
Query:  MGFSGLRLVVIFALLTVSCMAQAPAPAPG----SSQPLPPPPATPAPAPVVFPPSPTPAPNRGSSPSPAPASPSPAPEAPSPAPA---------APTPAP
        MGFSG+RLVVIFAL+ + CMAQAPAP P     S +P+PP PATPAP+PV FPP+P+ +P R  SPSP  ASPSPA EAPSPAP+         APTP+P
Subjt:  MGFSGLRLVVIFALLTVSCMAQAPAPAPG----SSQPLPPPPATPAPAPVVFPPSPTPAPNRGSSPSPAPASPSPAPEAPSPAPA---------APTPAP

Query:  ATSAPTPAPSSSPTPSGSPAGGPVVPPIASPPSPIGGEVPSPAPQAPPADNPAGAASHVGGAAALGIALAGTLFAVVLA
        ATSAPTPAPSS P PSGSPAG PVVPPIASPPSP   E PSP P+AP AD+PAGAASH+GGA  LGIA+AGTL A+V+A
Subjt:  ATSAPTPAPSSSPTPSGSPAGGPVVPPIASPPSPIGGEVPSPAPQAPPADNPAGAASHVGGAAALGIALAGTLFAVVLA

XP_038881138.1 vegetative cell wall protein gp1-like [Benincasa hispida]9.1e-4983.13Show/hide
Query:  MGFSGLRLVVIFALLTVSCMAQAPAPAPGSSQPLPPPPATPAPAPVVFPPSPTPAPNRGSSPSPAPASPSPAPEAPSPAPAAPTPAPATSAPTPAPSSSP
        MGFSG+R VVIFALLT  CMAQAPAPAPGSSQPLPP P TPAP+PVVFPPSPTP PNR  S SPAPASPSPAPEAPSPAPA P PAPAT+APTPAPSSS 
Subjt:  MGFSGLRLVVIFALLTVSCMAQAPAPAPGSSQPLPPPPATPAPAPVVFPPSPTPAPNRGSSPSPAPASPSPAPEAPSPAPAAPTPAPATSAPTPAPSSSP

Query:  TPSGSPAGGPVVPPIASPPSPIGGEVPSPAPQAPPADNPAGAASHVGGAAALGIALAGTLFAVVLA
        TPS    GGPVVPPIASPPSP G EVPS APQAP ADNPAGAASH+GG AA GIA+AGTLFAV+LA
Subjt:  TPSGSPAGGPVVPPIASPPSPIGGEVPSPAPQAPPADNPAGAASHVGGAAALGIALAGTLFAVVLA

TrEMBL top hitse value%identityAlignment
A0A0A0KG74 Uncharacterized protein4.0e-4273.49Show/hide
Query:  MGFSGLRLVVIFALLTVSCMAQAPAPAPGSSQPLPPPPATPAPAPVVFPPSPTPAPNRGSSPSPAPASPSPAPEAPSPAPAAPTPAPATSAPTPAPSSSP
        MGFSG+R V+IFALLT  CMAQAPAPAPGS QPL PP ATPAP+PVV PPSPTP PNR  SPSP P SPSPAP+A S       PAPA  APTP P S+P
Subjt:  MGFSGLRLVVIFALLTVSCMAQAPAPAPGSSQPLPPPPATPAPAPVVFPPSPTPAPNRGSSPSPAPASPSPAPEAPSPAPAAPTPAPATSAPTPAPSSSP

Query:  TPSGSPAGGPVVPPIASPPSPIGGEVPSPAPQAPPADNPAGAASHVGGAAALGIALAGTLFAVVLA
        TPS    GGPV+PPIASPPSP G EVPSPAPQ P ADNPAGA SH+GGAA LGIALAGTLF V+L+
Subjt:  TPSGSPAGGPVVPPIASPPSPIGGEVPSPAPQAPPADNPAGAASHVGGAAALGIALAGTLFAVVLA

A0A5D3CNQ6 Uncharacterized protein2.2e-4878.92Show/hide
Query:  MGFSGLRLVVIFALLTVSCMAQAPAPAPGSSQPLPPPPATPAPAPVVFPPSPTPAPNRGSSPSPAPASPSPAPEAPSPAPAAPTPAPATSAPTPAPSSSP
        MGFSG+R VVIFALLT  CMAQAP PAPGS QPL PP ATPAP+PVV PPSPTP PNR  SPSP P SPSPAP+APSPAP  P PAPA  APTP P S+P
Subjt:  MGFSGLRLVVIFALLTVSCMAQAPAPAPGSSQPLPPPPATPAPAPVVFPPSPTPAPNRGSSPSPAPASPSPAPEAPSPAPAAPTPAPATSAPTPAPSSSP

Query:  TPSGSPAGGPVVPPIASPPSPIGGEVPSPAPQAPPADNPAGAASHVGGAAALGIALAGTLFAVVLA
        TPS    GGPVVPPIASPPSP G EVPSPAPQ PPADNPAGAASH+GGAA LGIALAGTLFAV+L+
Subjt:  TPSGSPAGGPVVPPIASPPSPIGGEVPSPAPQAPPADNPAGAASHVGGAAALGIALAGTLFAVVLA

A0A6J1GF55 vegetative cell wall protein gp1-like8.6e-3767.6Show/hide
Query:  MGFSGLRLVVIFALLTVSCMAQAPAPAPG----SSQPLPPPPATPAPAPVVFPPSPTPAPNRGSSPSPAPASPSPAPEAPSPAPA---------APTPAP
        MG SG+RLVVIFAL+ + C AQAPAP P     S +P+PP PATPAP+PV FPPSP+ +P R  SPSP  ASPSPA EAPSPAP+         APTP+P
Subjt:  MGFSGLRLVVIFALLTVSCMAQAPAPAPG----SSQPLPPPPATPAPAPVVFPPSPTPAPNRGSSPSPAPASPSPAPEAPSPAPA---------APTPAP

Query:  ATSAPTPAPSSSPTPSGSPAGGPVVPPIASPPSPIGGEVPSPAPQAPPADNPAGAASHVGGAAALGIALAGTLFAVVLA
        ATSAPTPAPSS P PSGSPAG PVVPPIASPPSP   + PSP P+AP AD+PAGAASH+GGA  LGIA+AGTL A+V+A
Subjt:  ATSAPTPAPSSSPTPSGSPAGGPVVPPIASPPSPIGGEVPSPAPQAPPADNPAGAASHVGGAAALGIALAGTLFAVVLA

A0A6J1ITI1 vegetative cell wall protein gp1-like1.2e-3869.71Show/hide
Query:  MGFSGLRLVVIFALLTVSCMAQAPAPAPGSSQPLPPPPATPAPAPVVFPPSPTPAPNRGSSPSPAPASPSPAPEAPSPAPA---------APTPAPATSA
        MGFSG+RLVVIFAL+ + C AQAPAPA  S +P+PP PATPAP+PV FPPSP+ +P R  SPSP  ASPSPA EAPSPAP+         APTP+PATSA
Subjt:  MGFSGLRLVVIFALLTVSCMAQAPAPAPGSSQPLPPPPATPAPAPVVFPPSPTPAPNRGSSPSPAPASPSPAPEAPSPAPA---------APTPAPATSA

Query:  PTPAPSSSPTPSGSPAGGPVVPPIASPPSPIGGEVPSPAPQAPPADNPAGAASHVGGAAALGIALAGTLFAVVLA
        PTPAPSS P PSGSPAG PVVPPIASPPSP   + PSP P+AP AD+PAGAASH+GGA  LGIA+AGTL A+V+A
Subjt:  PTPAPSSSPTPSGSPAGGPVVPPIASPPSPIGGEVPSPAPQAPPADNPAGAASHVGGAAALGIALAGTLFAVVLA

A0A6J1KP28 classical arabinogalactan protein 4-like6.2e-1953.61Show/hide
Query:  MGFSGLRLVVIFALLTVSCMAQAPAPAPGSSQPLPPPPATPAPAPVVFPPSPTPAPNRGSSPSPAPASPSPAPEAPSPAPAAPTPAPATSAPTPAPSSSP
        MGFSG+R +++ ALL  +CMAQAPAP              PAPAP   P  P P         PAPA+P     APS +PA+PTPAP TS PTPAP    
Subjt:  MGFSGLRLVVIFALLTVSCMAQAPAPAPGSSQPLPPPPATPAPAPVVFPPSPTPAPNRGSSPSPAPASPSPAPEAPSPAPAAPTPAPATSAPTPAPSSSP

Query:  TPSGSPAGGPVVPPIASPPSPIGGEVPSPAPQAPPADNPAGAASHVGGAAALGIALAGTLFAVVLA
        TPSGSPAGGPVVP +ASP        PS AP+ PPADNP GAAS +G A  LG+A+AG+L AV+LA
Subjt:  TPSGSPAGGPVVPPIASPPSPIGGEVPSPAPQAPPADNPAGAASHVGGAAALGIALAGTLFAVVLA

SwissProt top hitse value%identityAlignment
Q9FPQ6 Vegetative cell wall protein gp11.9e-0448.74Show/hide
Query:  PAPAPGSSQPLPPPPATPAPAPVVFPPS-PTPAPNRGSSPSPAPASPS-PAPEAPSPAPAAPTPAPATSAPTPAPS-SSPTPSGSPAGGPVVPPIASP--
        PAP P  S P PPPP  P PA    PPS P+P P+      P P SPS P+P  PSPAP  P+PAP + AP+P PS + PTPS SP+  P   P  SP  
Subjt:  PAPAPGSSQPLPPPPATPAPAPVVFPPS-PTPAPNRGSSPSPAPASPS-PAPEAPSPAPAAPTPAPATSAPTPAPS-SSPTPSGSPAGGPVVPPIASP--

Query:  -PSPIGGEVPSPAPQAPPA
         PSP    +PSP+P+  P+
Subjt:  -PSPIGGEVPSPAPQAPPA

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTCTCTGGGCTTCGATTGGTTGTGATTTTTGCTTTGCTGACAGTGTCGTGTATGGCTCAGGCGCCGGCGCCGGCGCCGGGTTCTTCACAGCCTCTTCCTCCGCC
ACCAGCCACGCCGGCGCCTGCTCCGGTCGTTTTCCCTCCATCTCCGACTCCGGCGCCAAACAGAGGATCATCACCATCACCGGCTCCAGCGTCGCCCTCACCCGCTCCGG
AAGCTCCATCACCGGCGCCGGCGGCACCTACTCCAGCTCCGGCGACTAGTGCGCCTACCCCAGCTCCAAGCTCCAGTCCTACTCCTTCTGGGTCTCCCGCCGGTGGACCT
GTAGTTCCACCCATCGCGTCTCCTCCTTCACCCATCGGAGGCGAGGTGCCCTCACCGGCGCCCCAGGCACCGCCGGCCGACAACCCAGCTGGAGCGGCGTCGCACGTCGG
CGGAGCGGCTGCATTGGGGATCGCTTTGGCTGGAACTCTGTTCGCAGTGGTGTTAGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGATTCTCTGGGCTTCGATTGGTTGTGATTTTTGCTTTGCTGACAGTGTCGTGTATGGCTCAGGCGCCGGCGCCGGCGCCGGGTTCTTCACAGCCTCTTCCTCCGCC
ACCAGCCACGCCGGCGCCTGCTCCGGTCGTTTTCCCTCCATCTCCGACTCCGGCGCCAAACAGAGGATCATCACCATCACCGGCTCCAGCGTCGCCCTCACCCGCTCCGG
AAGCTCCATCACCGGCGCCGGCGGCACCTACTCCAGCTCCGGCGACTAGTGCGCCTACCCCAGCTCCAAGCTCCAGTCCTACTCCTTCTGGGTCTCCCGCCGGTGGACCT
GTAGTTCCACCCATCGCGTCTCCTCCTTCACCCATCGGAGGCGAGGTGCCCTCACCGGCGCCCCAGGCACCGCCGGCCGACAACCCAGCTGGAGCGGCGTCGCACGTCGG
CGGAGCGGCTGCATTGGGGATCGCTTTGGCTGGAACTCTGTTCGCAGTGGTGTTAGCGTAG
Protein sequenceShow/hide protein sequence
MGFSGLRLVVIFALLTVSCMAQAPAPAPGSSQPLPPPPATPAPAPVVFPPSPTPAPNRGSSPSPAPASPSPAPEAPSPAPAAPTPAPATSAPTPAPSSSPTPSGSPAGGP
VVPPIASPPSPIGGEVPSPAPQAPPADNPAGAASHVGGAAALGIALAGTLFAVVLA