; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0013297 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013297
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description40S ribosomal protein S6
Genome locationchr1:49166527..49168395
RNA-Seq ExpressionLag0013297
SyntenyLag0013297
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001377 - Ribosomal protein S6e
IPR014401 - Ribosomal protein S6, eukaryotic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_007205780.1 40S ribosomal protein S6 [Prunus persica]3.3e-11086.69Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE                     QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVSPDLSVLNLVIVKKG+NDLPGLTD++KPRMRGPKRASKIRKLFNL+KDDDVRKYVNTYRRTFT+K+GKKCSKAPKIQRLVTPLTLQRKR RIAEKK
Subjt:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPYIA
        KR+AKAKSEAAEYQKLLASRLKEQR+RRSESLAKRRS+LSGASKP  A
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPYIA

XP_018847771.1 40S ribosomal protein S6-like [Juglans regia]1.5e-11087.55Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        MKFNIANPTTGCQKKLEIDDD KLRAFWDKRISQEV+GDALG+                     QGVLTPGRVRLLLHRGT CFRGYGRRNGERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVSPDLSVLNLVIVKKGE+DLPGLTD++KPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK
Subjt:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPYIAA
        KRIAKAKSEAAEYQKLLA+RLKEQRERRSESLAKRRS+LSGASKP IAA
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPYIAA

XP_021816386.1 40S ribosomal protein S6 [Prunus avium]3.3e-11086.69Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE                     QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVSPDLSVLNLVIVKKG+NDLPGLTD++KPRMRGPKRASKIRKLFNL+KDDDVRKYVNTYRRTFT+K+GKKCSKAPKIQRLVTPLTLQRKR RIAEKK
Subjt:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPYIA
        KR+AKAKSEAAEYQKLLASRLKEQR+RRSESLAKRRS+LSGASKP  A
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPYIA

XP_022133330.1 40S ribosomal protein S6-like [Momordica charantia]1.6e-11289.56Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEV+GDALGE                     QGVLTPGRVRLLLHRGTPCFRG+GRRNGERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVSPDLSVLNLVIVKKGENDLPGLTDI+KPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK
Subjt:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPYIAA
        KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKP  AA
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPYIAA

XP_038882784.1 40S ribosomal protein S6-like [Benincasa hispida]6.7e-11188.35Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE                     QGVLT GRVRLLLHRGTPCFRGYGRRNGERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIV+PDLSVLNLVIVKKGENDLPGLTDI KPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFT K+GKKCSKAPKIQRLVTP TLQRKRGRIAEKK
Subjt:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPYIAA
        KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKP I A
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPYIAA

TrEMBL top hitse value%identityAlignment
A0A2I4GV42 40S ribosomal protein S67.3e-11187.55Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        MKFNIANPTTGCQKKLEIDDD KLRAFWDKRISQEV+GDALG+                     QGVLTPGRVRLLLHRGT CFRGYGRRNGERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVSPDLSVLNLVIVKKGE+DLPGLTD++KPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK
Subjt:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPYIAA
        KRIAKAKSEAAEYQKLLA+RLKEQRERRSESLAKRRS+LSGASKP IAA
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPYIAA

A0A6J1BUY4 40S ribosomal protein S67.8e-11389.56Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEV+GDALGE                     QGVLTPGRVRLLLHRGTPCFRG+GRRNGERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVSPDLSVLNLVIVKKGENDLPGLTDI+KPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK
Subjt:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPYIAA
        KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKP  AA
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPYIAA

A0A6J5XSH6 40S ribosomal protein S61.6e-11086.69Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE                     QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVSPDLSVLNLVIVKKG+NDLPGLTD++KPRMRGPKRASKIRKLFNL+KDDDVRKYVNTYRRTFT+K+GKKCSKAPKIQRLVTPLTLQRKR RIAEKK
Subjt:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPYIA
        KR+AKAKSEAAEYQKLLASRLKEQR+RRSESLAKRRS+LSGASKP  A
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPYIA

A0A6P5SRV1 40S ribosomal protein S61.6e-11086.69Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE                     QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVSPDLSVLNLVIVKKG+NDLPGLTD++KPRMRGPKRASKIRKLFNL+KDDDVRKYVNTYRRTFT+K+GKKCSKAPKIQRLVTPLTLQRKR RIAEKK
Subjt:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPYIA
        KR+AKAKSEAAEYQKLLASRLKEQR+RRSESLAKRRS+LSGASKP  A
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPYIA

M5VZU7 40S ribosomal protein S61.6e-11086.69Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE                     QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVSPDLSVLNLVIVKKG+NDLPGLTD++KPRMRGPKRASKIRKLFNL+KDDDVRKYVNTYRRTFT+K+GKKCSKAPKIQRLVTPLTLQRKR RIAEKK
Subjt:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPYIA
        KR+AKAKSEAAEYQKLLASRLKEQR+RRSESLAKRRS+LSGASKP  A
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPYIA

SwissProt top hitse value%identityAlignment
O48549 40S ribosomal protein S6-12.9e-10179.2Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        MKFN+ANPTTGCQKKLEIDDD KLRAF+DKRISQEV+GDALGE                     QGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVSPDLSVLNLVIVKKGENDLPGLTD +KPRMRGPKRASKIRKLFNL K+DDVR YVNTYRR FT K GK+ SKAPKIQRLVTPLTLQRKR RIA+KK
Subjt:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKL-SGASKPYIAA
        K+IAKA S+AA+YQKLLASRLKEQR+RRSESLAK+RS+L S A+KP + A
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKL-SGASKPYIAA

P29345 40S ribosomal protein S6 (Fragment)3.8e-7282.8Show/hide
Query:  EQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYR
        +QGVLTPGRVRLLL+RGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTD +KPRMRGP+   +   L+   K+DDVRKYVNT  
Subjt:  EQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYR

Query:  RTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPYIAA
          FTTK   K SKAPKIQRLVTPLTLQRKR RIA+KKKRIAKAKSEAAEYQKLLASRLKEQRE+RSESLAK+RS+LS ASKP IAA
Subjt:  RTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPYIAA

P51430 40S ribosomal protein S6-21.3e-10179.52Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        MKFN+ANPTTGCQKKLEIDDD KLRAF+DKR+SQEV+GDALGE                     QGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVSPDLSVLNLVIVKKG +DLPGLTD +KPRMRGPKRASKIRKLFNL K+DDVRKYVNTYRRTFT K GKK SKAPKIQRLVTPLTLQRKR RIA+KK
Subjt:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPYIAA
        KRIAKA S+AA+YQKLLASRLKEQR+RRSESLAK+RS+LS A    +AA
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPYIAA

P62753 40S ribosomal protein S63.2e-6359.75Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        MK NI+ P TGCQK +E+DD+ KLR F++KR++ EV  DALGE                     QGVLT GRVRLLL +G  C+R   RR GER+RKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIV  +LSVLNLVIVKKGE D+PGLTD   PR  GPKRAS+IRKLFNLSK+DDVR+YV   R+    +  K  +KAPKIQRLVTP  LQ KR RIA KK
Subjt:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRR
        +R  K K EAAEY KLLA R+KE +E+R E +AKRR
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRR

Q9M3V8 40S ribosomal protein S62.8e-10784.77Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        MKFNIANPTTGCQKKLEIDDD KLRAF+DKRISQEV+GDALGE                     QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVSPDLSVLNLVIVKKGENDLPGLTD++KPRMRGPKRASKIRKLFNLSK+DDVRKYVNTYRRTFT K GK CSKAPKIQRLVTPLTLQRKR RIAEKK
Subjt:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGAS
        KR+AKAKSEAAEYQKLLASRLKEQR+RRSESLAK+RS+LS A+
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGAS

Arabidopsis top hitse value%identityAlignment
AT4G31700.1 ribosomal protein S62.1e-10279.2Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        MKFN+ANPTTGCQKKLEIDDD KLRAF+DKRISQEV+GDALGE                     QGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVSPDLSVLNLVIVKKGENDLPGLTD +KPRMRGPKRASKIRKLFNL K+DDVR YVNTYRR FT K GK+ SKAPKIQRLVTPLTLQRKR RIA+KK
Subjt:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKL-SGASKPYIAA
        K+IAKA S+AA+YQKLLASRLKEQR+RRSESLAK+RS+L S A+KP + A
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKL-SGASKPYIAA

AT4G31700.2 ribosomal protein S61.2e-8185.03Show/hide
Query:  EQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYR
        +QGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTD +KPRMRGPKRASKIRKLFNL K+DDVR YVNTYR
Subjt:  EQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYR

Query:  RTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKL-SGASKPYIAA
        R FT K GK+ SKAPKIQRLVTPLTLQRKR RIA+KKK+IAKA S+AA+YQKLLASRLKEQR+RRSESLAK+RS+L S A+KP + A
Subjt:  RTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKL-SGASKPYIAA

AT5G10360.1 Ribosomal protein S6e9.4e-10379.52Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        MKFN+ANPTTGCQKKLEIDDD KLRAF+DKR+SQEV+GDALGE                     QGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVSPDLSVLNLVIVKKG +DLPGLTD +KPRMRGPKRASKIRKLFNL K+DDVRKYVNTYRRTFT K GKK SKAPKIQRLVTPLTLQRKR RIA+KK
Subjt:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPYIAA
        KRIAKA S+AA+YQKLLASRLKEQR+RRSESLAK+RS+LS A    +AA
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPYIAA

AT5G10360.2 Ribosomal protein S6e4.0e-6961.85Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        MKFN+ANPTTGCQKKLEIDDD KLRAF+DKR+SQEV+GDALGE                     QGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGE---------------------QGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVSPDLSVLNLVIVKK                                                    GKK SKAPKIQRLVTPLTLQRKR RIA+KK
Subjt:  GCIVSPDLSVLNLVIVKKGENDLPGLTDIKKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPYIAA
        KRIAKA S+AA+YQKLLASRLKEQR+RRSESLAK+RS+LS A    +AA
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPYIAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTTAACATTGCAAATCCCACTACTGGCTGCCAGAAAAAGCTCGAAATCGACGACGATGCCAAACTCCGGGCATTTTGGGATAAGAGAATCTCCCAAGAAGTTAA
TGGAGATGCACTTGGTGAACAAGGTGTTTTGACCCCTGGTCGTGTTCGCCTCTTGCTCCACAGAGGCACTCCTTGTTTCCGTGGTTATGGTAGGAGGAATGGTGAGAGAA
GAAGGAAGTCTGTCCGGGGTTGCATTGTCAGTCCAGACCTCTCTGTTTTGAATTTGGTGATTGTGAAGAAGGGTGAGAACGATCTACCTGGGCTAACAGATATCAAGAAG
CCGAGAATGCGAGGTCCGAAAAGGGCATCCAAGATTCGGAAGCTCTTCAACCTCTCCAAGGATGATGATGTTCGGAAGTATGTCAACACATATCGCAGAACCTTCACAAC
TAAATCTGGTAAGAAATGTAGTAAAGCCCCCAAAATCCAGAGACTGGTAACTCCCTTGACTCTCCAAAGGAAGCGAGGAAGGATTGCTGAAAAGAAAAAGAGAATTGCCA
AAGCTAAGTCCGAAGCAGCCGAGTATCAGAAGCTTCTAGCATCACGTTTGAAGGAACAACGCGAACGCCGAAGTGAGAGCTTAGCAAAGAGAAGATCCAAGCTCTCTGGT
GCCTCTAAGCCTTATATTGCAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTTAACATTGCAAATCCCACTACTGGCTGCCAGAAAAAGCTCGAAATCGACGACGATGCCAAACTCCGGGCATTTTGGGATAAGAGAATCTCCCAAGAAGTTAA
TGGAGATGCACTTGGTGAACAAGGTGTTTTGACCCCTGGTCGTGTTCGCCTCTTGCTCCACAGAGGCACTCCTTGTTTCCGTGGTTATGGTAGGAGGAATGGTGAGAGAA
GAAGGAAGTCTGTCCGGGGTTGCATTGTCAGTCCAGACCTCTCTGTTTTGAATTTGGTGATTGTGAAGAAGGGTGAGAACGATCTACCTGGGCTAACAGATATCAAGAAG
CCGAGAATGCGAGGTCCGAAAAGGGCATCCAAGATTCGGAAGCTCTTCAACCTCTCCAAGGATGATGATGTTCGGAAGTATGTCAACACATATCGCAGAACCTTCACAAC
TAAATCTGGTAAGAAATGTAGTAAAGCCCCCAAAATCCAGAGACTGGTAACTCCCTTGACTCTCCAAAGGAAGCGAGGAAGGATTGCTGAAAAGAAAAAGAGAATTGCCA
AAGCTAAGTCCGAAGCAGCCGAGTATCAGAAGCTTCTAGCATCACGTTTGAAGGAACAACGCGAACGCCGAAGTGAGAGCTTAGCAAAGAGAAGATCCAAGCTCTCTGGT
GCCTCTAAGCCTTATATTGCAGCTTAG
Protein sequenceShow/hide protein sequence
MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGEQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDIKK
PRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSG
ASKPYIAA