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Lag0013304 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013304
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionEpidermal patterning factor-like protein
Genome locationchr1:49208253..49208682
RNA-Seq ExpressionLag0013304
SyntenyLag0013304
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005507 - copper ion binding (molecular function)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036313.1 EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo var. makuwa]2.5e-3992.59Show/hide
Query:  GILFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFFDSSPQGNRYSFYKPLGWKCRCGNHFFNP
        GI FEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRA RLD+ SALPM FFDSS QGNRYSFYKPLGWKCRCGNHFFNP
Subjt:  GILFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFFDSSPQGNRYSFYKPLGWKCRCGNHFFNP

KAG6604039.1 EPIDERMAL PATTERNING FACTOR-like protein 1, partial [Cucurbita argyrosperma subsp. sororia]7.1e-5088.18Show/hide
Query:  MNLPAVWATSLLIVLLHLLLLLSASSPPRGILFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFFDSSPQGNRYSFYKPLGWK
        MNL  VWATSLL+VL+HLL LLSAS PP GI FEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMP RAGRLD+PSALPM FFDSSPQGNRYSFYKPL WK
Subjt:  MNLPAVWATSLLIVLLHLLLLLSASSPPRGILFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFFDSSPQGNRYSFYKPLGWK

Query:  CRCGNHFFNP
        CRCGN FFNP
Subjt:  CRCGNHFFNP

KGN48738.1 hypothetical protein Csa_003101 [Cucumis sativus]1.4e-5392.73Show/hide
Query:  MNLPAVWATSLLIVLLHLLLLLSASSPPRGILFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFFDSSPQGNRYSFYKPLGWK
        MNL  VWATSLLIVLLHLLLLLSASSPPRG+ FEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRA RLD+PSALPM FFDSS QGNRYSFYKPLGWK
Subjt:  MNLPAVWATSLLIVLLHLLLLLSASSPPRGILFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFFDSSPQGNRYSFYKPLGWK

Query:  CRCGNHFFNP
        CRCGNHFFNP
Subjt:  CRCGNHFFNP

XP_008440584.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo]5.3e-5392.73Show/hide
Query:  MNLPAVWATSLLIVLLHLLLLLSASSPPRGILFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFFDSSPQGNRYSFYKPLGWK
        MNL  VWATSLLIVLLHLLLLLSASSPPRGI FEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRA RLD+ SALPM FFDSS QGNRYSFYKPLGWK
Subjt:  MNLPAVWATSLLIVLLHLLLLLSASSPPRGILFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFFDSSPQGNRYSFYKPLGWK

Query:  CRCGNHFFNP
        CRCGNHFFNP
Subjt:  CRCGNHFFNP

XP_010646934.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Vitis vinifera]6.3e-3059.13Show/hide
Query:  VWATSLLIVLLHLLLLLSA-------SSPPRGILFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAG-RLDTPSALPMGFFDSSPQ--GNRYSFYK
        ++  +++  +LHLLL  ++       S   RG+LFE+KTRLGSTPPSCHNKCNECHPCMAVQVP++P  +G RL   + +PM FF+SSP    NRYS YK
Subjt:  VWATSLLIVLLHLLLLLSA-------SSPPRGILFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAG-RLDTPSALPMGFFDSSPQ--GNRYSFYK

Query:  PLGWKCRCGNHFFNP
        PLGWKC CG+HFFNP
Subjt:  PLGWKCRCGNHFFNP

TrEMBL top hitse value%identityAlignment
A0A0A0KGR1 Epidermal patterning factor-like protein6.7e-5492.73Show/hide
Query:  MNLPAVWATSLLIVLLHLLLLLSASSPPRGILFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFFDSSPQGNRYSFYKPLGWK
        MNL  VWATSLLIVLLHLLLLLSASSPPRG+ FEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRA RLD+PSALPM FFDSS QGNRYSFYKPLGWK
Subjt:  MNLPAVWATSLLIVLLHLLLLLSASSPPRGILFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFFDSSPQGNRYSFYKPLGWK

Query:  CRCGNHFFNP
        CRCGNHFFNP
Subjt:  CRCGNHFFNP

A0A1S3B112 Epidermal patterning factor-like protein2.6e-5392.73Show/hide
Query:  MNLPAVWATSLLIVLLHLLLLLSASSPPRGILFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFFDSSPQGNRYSFYKPLGWK
        MNL  VWATSLLIVLLHLLLLLSASSPPRGI FEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRA RLD+ SALPM FFDSS QGNRYSFYKPLGWK
Subjt:  MNLPAVWATSLLIVLLHLLLLLSASSPPRGILFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFFDSSPQGNRYSFYKPLGWK

Query:  CRCGNHFFNP
        CRCGNHFFNP
Subjt:  CRCGNHFFNP

A0A438KPW6 Epidermal patterning factor-like protein3.0e-3059.13Show/hide
Query:  VWATSLLIVLLHLLLLLSA-------SSPPRGILFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAG-RLDTPSALPMGFFDSSPQ--GNRYSFYK
        ++  +++  +LHLLL  ++       S   RG+LFE+KTRLGSTPPSCHNKCNECHPCMAVQVP++P  +G RL   + +PM FF+SSP    NRYS YK
Subjt:  VWATSLLIVLLHLLLLLSA-------SSPPRGILFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAG-RLDTPSALPMGFFDSSPQ--GNRYSFYK

Query:  PLGWKCRCGNHFFNP
        PLGWKC CG+HFFNP
Subjt:  PLGWKCRCGNHFFNP

A0A5A7T0A6 Epidermal patterning factor-like protein1.2e-3992.59Show/hide
Query:  GILFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFFDSSPQGNRYSFYKPLGWKCRCGNHFFNP
        GI FEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRA RLD+ SALPM FFDSS QGNRYSFYKPLGWKCRCGNHFFNP
Subjt:  GILFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFFDSSPQGNRYSFYKPLGWKCRCGNHFFNP

F6HJL0 Epidermal patterning factor-like protein3.0e-3059.13Show/hide
Query:  VWATSLLIVLLHLLLLLSA-------SSPPRGILFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAG-RLDTPSALPMGFFDSSPQ--GNRYSFYK
        ++  +++  +LHLLL  ++       S   RG+LFE+KTRLGSTPPSCHNKCNECHPCMAVQVP++P  +G RL   + +PM FF+SSP    NRYS YK
Subjt:  VWATSLLIVLLHLLLLLSA-------SSPPRGILFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAG-RLDTPSALPMGFFDSSPQ--GNRYSFYK

Query:  PLGWKCRCGNHFFNP
        PLGWKC CG+HFFNP
Subjt:  PLGWKCRCGNHFFNP

SwissProt top hitse value%identityAlignment
C4B8C4 EPIDERMAL PATTERNING FACTOR-like protein 35.0e-0639.71Show/hide
Query:  KTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFFDSSPQGNRYSFYKPLGWKCRC
        + R+GS PPSC  KC  C PC A+Q P          T S++P      SP    Y+ Y+P GW+C C
Subjt:  KTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFFDSSPQGNRYSFYKPLGWKCRC

Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 61.1e-0536.11Show/hide
Query:  LGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFFDSSPQGNRYSFYKPLGWKCRCGNHFFNP
        LGS+PP C +KC  C PC  V VP  PG      TP                 + Y P  W+C+CGN  + P
Subjt:  LGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFFDSSPQGNRYSFYKPLGWKCRCGNHFFNP

Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 11.9e-2143.8Show/hide
Query:  AVWATSLLIVLLHLLLLLSAS-----------SPPRGILFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFF----DSSPQGN
        A++ ++LL++ L L+LL++               P+  L EDK RLGSTPPSCHN+CN CHPCMA+QVP++P R+ R    +    GF       +   +
Subjt:  AVWATSLLIVLLHLLLLLSAS-----------SPPRGILFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFF----DSSPQGN

Query:  RYSFYKPLGWKCRCGNHFFNP
        +YS YKP+GWKC C  HF+NP
Subjt:  RYSFYKPLGWKCRCGNHFFNP

Q9T068 EPIDERMAL PATTERNING FACTOR-like protein 22.9e-0628.68Show/hide
Query:  VWA---TSLLIVLL-----HLLLLLSASSPPRGILFED----------KTRLGSTPPSCHN-KCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFFDSS-
        VW+   +S L++LL     H  L+ +    P  + F            +  +GS PP C   +C  C  C A+QVP+ P    +L +P          + 
Subjt:  VWA---TSLLIVLL-----HLLLLLSASSPPRGILFED----------KTRLGSTPPSCHN-KCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFFDSS-

Query:  ----PQGNRYSFYKPLGWKCRCGNHFFNP
             +G+  + YKP+ WKC+CGN  +NP
Subjt:  ----PQGNRYSFYKPLGWKCRCGNHFFNP

Arabidopsis top hitse value%identityAlignment
AT2G30370.1 allergen-related7.9e-0736.11Show/hide
Query:  LGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFFDSSPQGNRYSFYKPLGWKCRCGNHFFNP
        LGS+PP C +KC  C PC  V VP  PG      TP                 + Y P  W+C+CGN  + P
Subjt:  LGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFFDSSPQGNRYSFYKPLGWKCRCGNHFFNP

AT2G30370.2 allergen-related7.9e-0736.11Show/hide
Query:  LGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFFDSSPQGNRYSFYKPLGWKCRCGNHFFNP
        LGS+PP C +KC  C PC  V VP  PG      TP                 + Y P  W+C+CGN  + P
Subjt:  LGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFFDSSPQGNRYSFYKPLGWKCRCGNHFFNP

AT3G13898.1 unknown protein3.6e-0739.71Show/hide
Query:  KTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFFDSSPQGNRYSFYKPLGWKCRC
        + R+GS PPSC  KC  C PC A+Q P          T S++P      SP    Y+ Y+P GW+C C
Subjt:  KTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFFDSSPQGNRYSFYKPLGWKCRC

AT4G37810.1 unknown protein2.1e-0728.68Show/hide
Query:  VWA---TSLLIVLL-----HLLLLLSASSPPRGILFED----------KTRLGSTPPSCHN-KCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFFDSS-
        VW+   +S L++LL     H  L+ +    P  + F            +  +GS PP C   +C  C  C A+QVP+ P    +L +P          + 
Subjt:  VWA---TSLLIVLL-----HLLLLLSASSPPRGILFED----------KTRLGSTPPSCHN-KCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFFDSS-

Query:  ----PQGNRYSFYKPLGWKCRCGNHFFNP
             +G+  + YKP+ WKC+CGN  +NP
Subjt:  ----PQGNRYSFYKPLGWKCRCGNHFFNP

AT5G10310.1 unknown protein1.3e-2243.8Show/hide
Query:  AVWATSLLIVLLHLLLLLSAS-----------SPPRGILFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFF----DSSPQGN
        A++ ++LL++ L L+LL++               P+  L EDK RLGSTPPSCHN+CN CHPCMA+QVP++P R+ R    +    GF       +   +
Subjt:  AVWATSLLIVLLHLLLLLSAS-----------SPPRGILFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFF----DSSPQGN

Query:  RYSFYKPLGWKCRCGNHFFNP
        +YS YKP+GWKC C  HF+NP
Subjt:  RYSFYKPLGWKCRCGNHFFNP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTGCCTGCTGTTTGGGCCACCTCATTACTTATTGTGCTTCTGCATCTTCTTCTTCTTCTCTCCGCCTCTTCCCCTCCCAGAGGTATATTGTTCGAAGACAAAAC
CAGGCTCGGATCCACCCCACCAAGCTGCCATAACAAGTGCAACGAGTGCCACCCGTGCATGGCGGTGCAAGTGCCTAGTATGCCCGGCCGCGCCGGCCGCTTGGATACGC
CCTCGGCTTTGCCAATGGGATTTTTTGACTCATCTCCACAAGGGAACAGATACTCATTTTACAAGCCATTGGGTTGGAAATGCCGCTGTGGGAACCACTTCTTCAATCCT
TAG
mRNA sequenceShow/hide mRNA sequence
ATGAATTTGCCTGCTGTTTGGGCCACCTCATTACTTATTGTGCTTCTGCATCTTCTTCTTCTTCTCTCCGCCTCTTCCCCTCCCAGAGGTATATTGTTCGAAGACAAAAC
CAGGCTCGGATCCACCCCACCAAGCTGCCATAACAAGTGCAACGAGTGCCACCCGTGCATGGCGGTGCAAGTGCCTAGTATGCCCGGCCGCGCCGGCCGCTTGGATACGC
CCTCGGCTTTGCCAATGGGATTTTTTGACTCATCTCCACAAGGGAACAGATACTCATTTTACAAGCCATTGGGTTGGAAATGCCGCTGTGGGAACCACTTCTTCAATCCT
TAG
Protein sequenceShow/hide protein sequence
MNLPAVWATSLLIVLLHLLLLLSASSPPRGILFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDTPSALPMGFFDSSPQGNRYSFYKPLGWKCRCGNHFFNP