; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0013353 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013353
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionE3 ubiquitin-protein ligase RHA2B-like
Genome locationchr1:49594618..49595339
RNA-Seq ExpressionLag0013353
SyntenyLag0013353
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036272.1 putative E3 ubiquitin-protein ligase RHA2B [Cucumis melo var. makuwa]1.9e-8094.94Show/hide
Query:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRVITTAQFLKLIEEKNPTIRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKD
        MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRVITTAQFLKLIE+KNPTIRFSNK+T + ADQCAVCLSEFEEGEKVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRVITTAQFLKLIEEKNPTIRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKD

Query:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGNIVF
        CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGN ++
Subjt:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGNIVF

XP_008440648.1 PREDICTED: probable E3 ubiquitin-protein ligase RHA2B [Cucumis melo]7.9e-7996.73Show/hide
Query:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRVITTAQFLKLIEEKNPTIRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKD
        MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRVITTAQFLKLIE+KNPTIRFSNK+T + ADQCAVCLSEFEEGEKVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRVITTAQFLKLIEEKNPTIRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKD

Query:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALH
        CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALH
Subjt:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALH

XP_022132528.1 E3 ubiquitin-protein ligase RHA2B-like [Momordica charantia]7.2e-8092.41Show/hide
Query:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRVITTAQFLKLIEEKNPTIRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKD
        MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRP ADKRVITT Q+ KLIEE+NPTIRFSNK+TS+PADQCAVCLSEFEEG+KVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRVITTAQFLKLIEEKNPTIRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKD

Query:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGNIVF
        CLDNWLKLCFATCPLCRSKVLPDD+VAGYHRLRDRVEYDGSDEELIFLLSALHGN ++
Subjt:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGNIVF

XP_022963436.1 E3 ubiquitin-protein ligase RHA2B-like isoform X1 [Cucurbita moschata]1.1e-8094.3Show/hide
Query:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRVITTAQFLKLIEEKNPTIRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKD
        MGALSEFFSHLHTMTAVFFTLL+LE VIL+RTIFGLRPN DKRVI TAQFLKLIEEKNPTIRFSNKITS+PADQCAVCLSEFEEGEKVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRVITTAQFLKLIEEKNPTIRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKD

Query:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGNIVF
        CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGN ++
Subjt:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGNIVF

XP_038883588.1 E3 ubiquitin-protein ligase RHA2B-like [Benincasa hispida]2.5e-8092.73Show/hide
Query:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRVITTAQFLKLIEEKNPTIRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKD
        MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRV+TTAQFLKLIEEKNPTIRFSNK+TS+ ADQCAVCLSEFEEGEKVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRVITTAQFLKLIEEKNPTIRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKD

Query:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG-NIVFSLQLTS
        CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG  ++F   L S
Subjt:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG-NIVFSLQLTS

TrEMBL top hitse value%identityAlignment
A0A0A0KM08 RING-type domain-containing protein3.5e-8093.67Show/hide
Query:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRVITTAQFLKLIEEKNPTIRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKD
        MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPN+DKRVITTAQF KLIE+KNPTIRFSNK+T + ADQCAVCLSEFEEGEKVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRVITTAQFLKLIEEKNPTIRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKD

Query:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGNIVF
        CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGN ++
Subjt:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGNIVF

A0A1S3B160 probable E3 ubiquitin-protein ligase RHA2B3.8e-7996.73Show/hide
Query:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRVITTAQFLKLIEEKNPTIRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKD
        MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRVITTAQFLKLIE+KNPTIRFSNK+T + ADQCAVCLSEFEEGEKVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRVITTAQFLKLIEEKNPTIRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKD

Query:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALH
        CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALH
Subjt:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALH

A0A5A7SYH1 Putative E3 ubiquitin-protein ligase RHA2B9.1e-8194.94Show/hide
Query:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRVITTAQFLKLIEEKNPTIRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKD
        MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRVITTAQFLKLIE+KNPTIRFSNK+T + ADQCAVCLSEFEEGEKVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRVITTAQFLKLIEEKNPTIRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKD

Query:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGNIVF
        CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGN ++
Subjt:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGNIVF

A0A6J1BWI1 E3 ubiquitin-protein ligase RHA2B-like3.5e-8092.41Show/hide
Query:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRVITTAQFLKLIEEKNPTIRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKD
        MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRP ADKRVITT Q+ KLIEE+NPTIRFSNK+TS+PADQCAVCLSEFEEG+KVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRVITTAQFLKLIEEKNPTIRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKD

Query:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGNIVF
        CLDNWLKLCFATCPLCRSKVLPDD+VAGYHRLRDRVEYDGSDEELIFLLSALHGN ++
Subjt:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGNIVF

A0A6J1HG49 E3 ubiquitin-protein ligase RHA2B-like isoform X15.4e-8194.3Show/hide
Query:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRVITTAQFLKLIEEKNPTIRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKD
        MGALSEFFSHLHTMTAVFFTLL+LE VIL+RTIFGLRPN DKRVI TAQFLKLIEEKNPTIRFSNKITS+PADQCAVCLSEFEEGEKVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRVITTAQFLKLIEEKNPTIRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKD

Query:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGNIVF
        CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGN ++
Subjt:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGNIVF

SwissProt top hitse value%identityAlignment
Q0VD51 E3 ubiquitin-protein ligase RNF131.3e-1050Show/hide
Query:  DQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLP
        D CA+CL E+E+G+K+R L C+H +H  C+D WL     TCP+C+ KV+P
Subjt:  DQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLP

Q8LPN7 E3 ubiquitin-protein ligase RING1-like1.5e-1142.42Show/hide
Query:  PTIRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDD
        PT++ +  +  +  +QCAVC+ EFE+G  V+++ C H FH+DCL  WL+L   +CP+CR ++  DD
Subjt:  PTIRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDD

Q9XF92 Brassinosteroid-responsive RING protein 11.3e-1044.16Show/hide
Query:  LIEEKNPTIRFSNKITSTPAD---QCAVCLSEFEEGEKVRKLQ-CNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDI
        LI E  P I+F  ++T++  D    CAVCL EFE  +++R L+ C H FH+ CLD W+     TCPLCR+  +PD++
Subjt:  LIEEKNPTIRFSNKITSTPAD---QCAVCLSEFEEGEKVRKLQ-CNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDI

Q9ZT50 E3 ubiquitin-protein ligase RHA2A2.7e-1356.14Show/hide
Query:  CAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDIVAGYHR
        C VCLS+ +EGE+VRKL+C H FHK CL+ WL     TCPLCRS ++ DD V+   R
Subjt:  CAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDIVAGYHR

Q9ZU51 E3 ubiquitin-protein ligase RHA2B1.9e-1440.59Show/hide
Query:  LLLEFVILIRTIFGLRPNADKRVITTAQFLKLIEEKNPTIRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVL
        LL  F   +R++  L P++   V+ T+    L ++ N    FS + +   A  C VCLS+ + GE+VRKL C H FHK CL+ WL+     CPLCRS +L
Subjt:  LLLEFVILIRTIFGLRPNADKRVITTAQFLKLIEEKNPTIRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVL

Query:  P
        P
Subjt:  P

Arabidopsis top hitse value%identityAlignment
AT1G15100.1 RING-H2 finger A2A1.9e-1456.14Show/hide
Query:  CAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDIVAGYHR
        C VCLS+ +EGE+VRKL+C H FHK CL+ WL     TCPLCRS ++ DD V+   R
Subjt:  CAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDIVAGYHR

AT2G01150.1 RING-H2 finger protein 2B1.3e-1540.59Show/hide
Query:  LLLEFVILIRTIFGLRPNADKRVITTAQFLKLIEEKNPTIRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVL
        LL  F   +R++  L P++   V+ T+    L ++ N    FS + +   A  C VCLS+ + GE+VRKL C H FHK CL+ WL+     CPLCRS +L
Subjt:  LLLEFVILIRTIFGLRPNADKRVITTAQFLKLIEEKNPTIRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVL

Query:  P
        P
Subjt:  P

AT3G19950.1 RING/U-box superfamily protein1.1e-1242.42Show/hide
Query:  PTIRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDD
        PT++ +  +  +  +QCAVC+ EFE+G  V+++ C H FH+DCL  WL+L   +CP+CR ++  DD
Subjt:  PTIRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDD

AT3G61460.1 brassinosteroid-responsive RING-H28.9e-1244.16Show/hide
Query:  LIEEKNPTIRFSNKITSTPAD---QCAVCLSEFEEGEKVRKLQ-CNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDI
        LI E  P I+F  ++T++  D    CAVCL EFE  +++R L+ C H FH+ CLD W+     TCPLCR+  +PD++
Subjt:  LIEEKNPTIRFSNKITSTPAD---QCAVCLSEFEEGEKVRKLQ-CNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDI

AT5G45290.1 RING/U-box superfamily protein1.8e-1241.43Show/hide
Query:  IRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDIVAGYH
        I+   K  S    QC +CL E+EE + +R L C+H FHK C+D WLK     CPLCR  +   D  +  H
Subjt:  IRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDIVAGYH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCTCTCTCCGAGTTCTTCTCCCACCTTCATACAATGACCGCCGTCTTCTTCACGCTTTTACTTCTCGAATTCGTAATTCTCATTCGCACGATCTTCGGATTGAG
GCCTAACGCCGACAAGCGCGTAATCACGACGGCGCAGTTTTTGAAACTGATCGAAGAGAAGAATCCGACGATTCGATTCTCCAATAAGATCACCTCAACTCCCGCCGATC
AGTGCGCCGTTTGCCTCTCGGAATTCGAGGAAGGGGAAAAGGTACGGAAATTGCAATGCAACCACACTTTTCACAAGGATTGCCTCGATAATTGGTTGAAACTCTGTTTC
GCTACCTGTCCGCTTTGCCGGAGTAAGGTCTTGCCGGACGATATTGTCGCCGGCTACCACAGGCTCCGGGACCGTGTAGAGTACGACGGCAGCGACGAGGAGCTCATCTT
TTTGTTATCGGCATTACATGGGAATATTGTTTTCTCCCTTCAATTGACGAGCAATAGCGTTAGGGAACAGCTCGTTTCTGGTTCGATTGATCTCCAGCTAGATCGAGTAA
AATCGTGTATGTTTCTGTTTACCTGCAATTACGCAAGCCAACTGTTTGATGCTTTCTTTGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCTCTCTCCGAGTTCTTCTCCCACCTTCATACAATGACCGCCGTCTTCTTCACGCTTTTACTTCTCGAATTCGTAATTCTCATTCGCACGATCTTCGGATTGAG
GCCTAACGCCGACAAGCGCGTAATCACGACGGCGCAGTTTTTGAAACTGATCGAAGAGAAGAATCCGACGATTCGATTCTCCAATAAGATCACCTCAACTCCCGCCGATC
AGTGCGCCGTTTGCCTCTCGGAATTCGAGGAAGGGGAAAAGGTACGGAAATTGCAATGCAACCACACTTTTCACAAGGATTGCCTCGATAATTGGTTGAAACTCTGTTTC
GCTACCTGTCCGCTTTGCCGGAGTAAGGTCTTGCCGGACGATATTGTCGCCGGCTACCACAGGCTCCGGGACCGTGTAGAGTACGACGGCAGCGACGAGGAGCTCATCTT
TTTGTTATCGGCATTACATGGGAATATTGTTTTCTCCCTTCAATTGACGAGCAATAGCGTTAGGGAACAGCTCGTTTCTGGTTCGATTGATCTCCAGCTAGATCGAGTAA
AATCGTGTATGTTTCTGTTTACCTGCAATTACGCAAGCCAACTGTTTGATGCTTTCTTTGCATGA
Protein sequenceShow/hide protein sequence
MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRVITTAQFLKLIEEKNPTIRFSNKITSTPADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCF
ATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGNIVFSLQLTSNSVREQLVSGSIDLQLDRVKSCMFLFTCNYASQLFDAFFA