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Lag0013357 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013357
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTranslation initiation factor IF-2, putative isoform 1
Genome locationchr1:49620131..49621236
RNA-Seq ExpressionLag0013357
SyntenyLag0013357
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0003743 - translation initiation factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594850.1 hypothetical protein SDJN03_11403, partial [Cucurbita argyrosperma subsp. sororia]1.9e-8087.18Show/hide
Query:  MARRKAKKTVKKSSPSPGEKAKDEAENKSKNEEQAPMVSDEDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEENLPNLSIL-RGEQ
        MARRKAKKTVK SSPSP EKAKDEAEN+ K+EEQAP+VSDEDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFF+E LPNLSI  +GE 
Subjt:  MARRKAKKTVKKSSPSPGEKAKDEAENKSKNEEQAPMVSDEDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEENLPNLSIL-RGEQ

Query:  GEIEVQWKDTEGDLHNNLADGIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLE-EPSDSMMLGMPDILQTPGVS
        GEIEVQWK+TE +L  N  DG+D+HASLLHRLSIAYPN SAGMRSLNGFEFSSKSVKTNPFNVE+LQIPSLVLE EPSDSMMLGM DILQTPGVS
Subjt:  GEIEVQWKDTEGDLHNNLADGIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLE-EPSDSMMLGMPDILQTPGVS

KAG6604007.1 hypothetical protein SDJN03_04616, partial [Cucurbita argyrosperma subsp. sororia]5.5e-8084.54Show/hide
Query:  MARRKAKKTVKKSSPSPGEKAKDEAENKSKNEEQAPMVSDEDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEENLPNLSI-LRGEQ
        MARRKAKK+VKKSSPSP  +AKD + N+ K+E+QA +VSDEDVERHA AIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEE LP+LSI  RGEQ
Subjt:  MARRKAKKTVKKSSPSPGEKAKDEAENKSKNEEQAPMVSDEDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEENLPNLSI-LRGEQ

Query:  GEIEVQWKDTEGDLHNNLADGIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLEEPSDSMMLGMPDILQTPGVS
        GEIEVQWKDTE +LH N ADGIDIHASLLHRLS AYPNCSAGMRS NGFEFSSKSVKTNPFNVENLQIP+  LEEPSD+M+LGMPD+LQTPGVS
Subjt:  GEIEVQWKDTEGDLHNNLADGIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLEEPSDSMMLGMPDILQTPGVS

KAG7026813.1 hypothetical protein SDJN02_10820, partial [Cucurbita argyrosperma subsp. argyrosperma]7.2e-8086.67Show/hide
Query:  MARRKAKKTVKKSSPSPGEKAKDEAENKSKNEEQAPMVSDEDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEENLPNLSIL-RGEQ
        MARRKAKKTVK SSPSP EKAKDEAEN+ K+EEQAP+V DEDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFF+E LPNLSI  +GE 
Subjt:  MARRKAKKTVKKSSPSPGEKAKDEAENKSKNEEQAPMVSDEDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEENLPNLSIL-RGEQ

Query:  GEIEVQWKDTEGDLHNNLADGIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLE-EPSDSMMLGMPDILQTPGVS
        GEIEVQWK+TE +L  N  DG+D+HASLLHRLSIAYPN SAGMRSLNGFEFSSKSVKTNPFNVE+LQIPSLVLE EPSDSMMLGM DILQTPGVS
Subjt:  GEIEVQWKDTEGDLHNNLADGIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLE-EPSDSMMLGMPDILQTPGVS

KAG7034170.1 hypothetical protein SDJN02_03897, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-8083.33Show/hide
Query:  MARRKAKKTVKKSSPSPGEKAKDEAENKSKNEEQAPMVSDEDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEENLPNLSI-LRGEQ
        MARRKAKK+VKKSSPSP  +AKD + N+ K+E+QA +VSDEDVERHA AIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEE LP+LSI  RGEQ
Subjt:  MARRKAKKTVKKSSPSPGEKAKDEAENKSKNEEQAPMVSDEDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEENLPNLSI-LRGEQ

Query:  GEIEVQWKDTEGDLHNNLADGIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLEEPSDSMMLGMPDILQTPGVSTFVV
        GEIEVQWKDTE +LH N ADGIDIHASLLHRLS AYPNCSAGMRS NGFEFSSKSVKTNPFNVENLQIP+  LEEPSD+M+LGMPD+LQTPGV  F+V
Subjt:  GEIEVQWKDTEGDLHNNLADGIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLEEPSDSMMLGMPDILQTPGVSTFVV

XP_023543921.1 uncharacterized protein LOC111803645 [Cucurbita pepo subsp. pepo]1.6e-7984.02Show/hide
Query:  MARRKAKKTVKKSSPSPGEKAKDEAENKSKNEEQAPMVSDEDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEENLPNLSI-LRGEQ
        MARRKAKK+VKKSSPSP  +AKD + N+ K+E+QA +VSDEDVERHA AIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEE LP+LSI  RGEQ
Subjt:  MARRKAKKTVKKSSPSPGEKAKDEAENKSKNEEQAPMVSDEDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEENLPNLSI-LRGEQ

Query:  GEIEVQWKDTEGDLHNNLADGIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLEEPSDSMMLGMPDILQTPGVS
        GEIEVQWK+TE +LH N ADGIDIHASLLHRLS AYPNCSAGMRS NGFEFSSKSVKTNPFNVENLQIP+  LEEPSD+M+LGMPD+LQTPGVS
Subjt:  GEIEVQWKDTEGDLHNNLADGIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLEEPSDSMMLGMPDILQTPGVS

TrEMBL top hitse value%identityAlignment
A0A1S4DWB9 uncharacterized protein LOC1034894364.7e-7782.99Show/hide
Query:  MARRKAKKTVKKSSPSPGEKAKDEAENKSKNEEQAPMVSDEDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEENLPNLSI-LRGEQ
        MARRKAKKTVKKSSPS G  AKDEA +K K        SDEDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEE LP+LSI +RG+Q
Subjt:  MARRKAKKTVKKSSPSPGEKAKDEAENKSKNEEQAPMVSDEDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEENLPNLSI-LRGEQ

Query:  GEIEVQWKDTEGDLHNNLADGIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLEEPSDSMMLGMPDILQTPGVS
        GEIEVQWKDTE +LH N ADG+DIHASLLHRLS AYP CSAGMRS NGFEFSSKSVKTNPFN ENLQIP+ VLEEPSD+M+LGMPDILQTPG+S
Subjt:  GEIEVQWKDTEGDLHNNLADGIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLEEPSDSMMLGMPDILQTPGVS

A0A5A7SXV4 Translation initiation factor IF-2, putative isoform 14.7e-7782.99Show/hide
Query:  MARRKAKKTVKKSSPSPGEKAKDEAENKSKNEEQAPMVSDEDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEENLPNLSI-LRGEQ
        MARRKAKKTVKKSSPS G  AKDEA +K K        SDEDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEE LP+LSI +RG+Q
Subjt:  MARRKAKKTVKKSSPSPGEKAKDEAENKSKNEEQAPMVSDEDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEENLPNLSI-LRGEQ

Query:  GEIEVQWKDTEGDLHNNLADGIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLEEPSDSMMLGMPDILQTPGVS
        GEIEVQWKDTE +LH N ADG+DIHASLLHRLS AYP CSAGMRS NGFEFSSKSVKTNPFN ENLQIP+ VLEEPSD+M+LGMPDILQTPG+S
Subjt:  GEIEVQWKDTEGDLHNNLADGIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLEEPSDSMMLGMPDILQTPGVS

A0A6J1BYE7 uncharacterized protein LOC1110058542.3e-7986.01Show/hide
Query:  MARRKAKKTVKKSSPSPGEKAKDEAENKSKNEEQAPMVSDEDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEENLPNLSI-LRGEQ
        MARRKAKKT KK SPSP      EAEN+SK EEQAP+VS+EDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTP+LQFFEE LPNLSI   GEQ
Subjt:  MARRKAKKTVKKSSPSPGEKAKDEAENKSKNEEQAPMVSDEDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEENLPNLSI-LRGEQ

Query:  GEIEVQWKDTEGDLHNNLADGIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLEEPSDSMMLGMPDILQTPGV
        GEIEVQWKD  G+LH   ADGIDIHASLLHRLSIAYPNCSAGM+S+NGFEFSSKSVKTN FNVENLQIPS VLEEPSDSMMLGMPDILQTPGV
Subjt:  GEIEVQWKDTEGDLHNNLADGIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLEEPSDSMMLGMPDILQTPGV

A0A6J1GFT3 uncharacterized protein LOC1114537767.7e-8084.02Show/hide
Query:  MARRKAKKTVKKSSPSPGEKAKDEAENKSKNEEQAPMVSDEDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEENLPNLSI-LRGEQ
        MARRKAKK+VKKSSPSP  +AKD + N+ K+E+QA +VSDEDVERHA AIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEE LP+LSI  RGEQ
Subjt:  MARRKAKKTVKKSSPSPGEKAKDEAENKSKNEEQAPMVSDEDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEENLPNLSI-LRGEQ

Query:  GEIEVQWKDTEGDLHNNLADGIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLEEPSDSMMLGMPDILQTPGVS
        GEIEVQWKDTE +LH N ADGIDIHASLLHRLS AYPNCSAGMRS NGFEFSSKSVKTNPFNVENLQIP+  LEEPSD+M+LGMPD+L+TPGVS
Subjt:  GEIEVQWKDTEGDLHNNLADGIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLEEPSDSMMLGMPDILQTPGVS

A0A6J1ILD3 uncharacterized protein LOC1114784963.8e-7983.51Show/hide
Query:  MARRKAKKTVKKSSPSPGEKAKDEAENKSKNEEQAPMVSDEDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEENLPNLSI-LRGEQ
        MARRKAKK+VKKSSPSP  +AKD + N+ K+E+QA +VSDEDVERHA AIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFF E LP+LSI  RGEQ
Subjt:  MARRKAKKTVKKSSPSPGEKAKDEAENKSKNEEQAPMVSDEDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEENLPNLSI-LRGEQ

Query:  GEIEVQWKDTEGDLHNNLADGIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLEEPSDSMMLGMPDILQTPGVS
        GEIEVQWKDTE +LH N ADGIDIHASLLHRLS AYPNCSAG+RS NGFEFSSKSVKTNPFNVENLQIP+ VLEEPSD+M+LGMPD+LQTPG S
Subjt:  GEIEVQWKDTEGDLHNNLADGIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLEEPSDSMMLGMPDILQTPGVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G39630.1 unknown protein1.2e-3244.85Show/hide
Query:  MARRKAKKTVKKSSPSPGEKAKDEAENKSKNEEQAPMVSDEDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEENLPNLSILRGEQ-
        M +RKAK+ VK +     +      E + + EE+     DE+VER  AAIRAIRDVEIE+++T LRLLRSYF +EQL TP+L FF+ENLP+LSI R E+ 
Subjt:  MARRKAKKTVKKSSPSPGEKAKDEAENKSKNEEQAPMVSDEDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEENLPNLSILRGEQ-

Query:  GEIEVQWKDTEGDLHNNLADGIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLEEPSDSMMLGMPDILQTPGVS
        GEIE++W+D  GD      +G+D++ S+L RLS+ + +  +   SL G++    +VK N    +N Q+ +LV +  S++ ML   D  QTPGV+
Subjt:  GEIEVQWKDTEGDLHNNLADGIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLEEPSDSMMLGMPDILQTPGVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGGCGAAAGGCGAAGAAAACTGTTAAGAAGTCTAGCCCTTCACCTGGGGAAAAAGCGAAGGATGAAGCAGAAAATAAGTCAAAAAATGAGGAGCAAGCACCTAT
GGTGTCCGACGAGGATGTTGAACGGCATGCTGCTGCAATTCGTGCCATTCGGGATGTGGAGATCGAGCGTTTGATTACTGAACTGCGGTTGCTTCGTTCGTATTTCAACA
AAGAGCAATTGCAAACTCCTCTATTGCAATTTTTCGAGGAAAATCTTCCGAACTTATCCATTTTGAGAGGTGAACAGGGAGAAATTGAAGTACAATGGAAGGATACAGAG
GGTGATTTACACAACAATCTAGCTGATGGAATAGATATACATGCTTCTCTGCTGCATCGCCTGTCCATAGCTTATCCTAACTGCTCTGCCGGAATGCGATCTTTAAATGG
ATTTGAATTTTCCAGTAAATCAGTGAAAACAAATCCTTTCAATGTTGAGAACCTGCAAATTCCGAGTTTAGTTTTGGAGGAGCCCTCAGATAGTATGATGCTCGGGATGC
CAGACATTCTTCAAACTCCTGGGGTTAGTACCTTCGTGGTTGTTGCTCGCAGCTTATTGCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGGCGAAAGGCGAAGAAAACTGTTAAGAAGTCTAGCCCTTCACCTGGGGAAAAAGCGAAGGATGAAGCAGAAAATAAGTCAAAAAATGAGGAGCAAGCACCTAT
GGTGTCCGACGAGGATGTTGAACGGCATGCTGCTGCAATTCGTGCCATTCGGGATGTGGAGATCGAGCGTTTGATTACTGAACTGCGGTTGCTTCGTTCGTATTTCAACA
AAGAGCAATTGCAAACTCCTCTATTGCAATTTTTCGAGGAAAATCTTCCGAACTTATCCATTTTGAGAGGTGAACAGGGAGAAATTGAAGTACAATGGAAGGATACAGAG
GGTGATTTACACAACAATCTAGCTGATGGAATAGATATACATGCTTCTCTGCTGCATCGCCTGTCCATAGCTTATCCTAACTGCTCTGCCGGAATGCGATCTTTAAATGG
ATTTGAATTTTCCAGTAAATCAGTGAAAACAAATCCTTTCAATGTTGAGAACCTGCAAATTCCGAGTTTAGTTTTGGAGGAGCCCTCAGATAGTATGATGCTCGGGATGC
CAGACATTCTTCAAACTCCTGGGGTTAGTACCTTCGTGGTTGTTGCTCGCAGCTTATTGCATTAG
Protein sequenceShow/hide protein sequence
MARRKAKKTVKKSSPSPGEKAKDEAENKSKNEEQAPMVSDEDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEENLPNLSILRGEQGEIEVQWKDTE
GDLHNNLADGIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLEEPSDSMMLGMPDILQTPGVSTFVVVARSLLH