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Lag0013431 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013431
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr1:50200186..50204466
RNA-Seq ExpressionLag0013431
SyntenyLag0013431
Gene Ontology termsGO:0044238 - primary metabolic process (biological process)
GO:0071704 - organic substance metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KYP54574.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]8.7e-0543.06Show/hide
Query:  GRLHIYNNAVT------------PQSVCSNIDKIIRSFLWHGANQSGSFPLVKWNLVAAPKEFGGLGFFKSR
        GRL + N+ VT            PQ+VC+ I++  R+ LW  A  S  + LV WN V  PKEFGGLG  +SR
Subjt:  GRLHIYNNAVT------------PQSVCSNIDKIIRSFLWHGANQSGSFPLVKWNLVAAPKEFGGLGFFKSR

KYP62168.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]8.7e-0543.06Show/hide
Query:  GRLHIYNNAVT------------PQSVCSNIDKIIRSFLWHGANQSGSFPLVKWNLVAAPKEFGGLGFFKSR
        GRL + N+ VT            PQ+VC+ I++  R+ LW  A  S  + LV WN V  PKEFGGLG  +SR
Subjt:  GRLHIYNNAVT------------PQSVCSNIDKIIRSFLWHGANQSGSFPLVKWNLVAAPKEFGGLGFFKSR

KYP65324.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]8.7e-0543.06Show/hide
Query:  GRLHIYNNAVT------------PQSVCSNIDKIIRSFLWHGANQSGSFPLVKWNLVAAPKEFGGLGFFKSR
        GRL + N+ VT            PQ+VC+ I++  R+ LW  A  S  + LV WN V  PKEFGGLG  +SR
Subjt:  GRLHIYNNAVT------------PQSVCSNIDKIIRSFLWHGANQSGSFPLVKWNLVAAPKEFGGLGFFKSR

RVW84319.1 putative ribonuclease H protein [Vitis vinifera]8.7e-0542.42Show/hide
Query:  PQSVCSNIDKIIRSFLWHGANQSGSFPLVKWNLVAAPKEFGGLGFFKSRGAIPSQARGSSPPERHG
        P+S+ S I+K+ R FLW GA +     L+KW++V+ PKE GGLGF K+      +     P ER+G
Subjt:  PQSVCSNIDKIIRSFLWHGANQSGSFPLVKWNLVAAPKEFGGLGFFKSRGAIPSQARGSSPPERHG

XP_030945817.1 uncharacterized protein LOC115970305 [Quercus lobata]5.1e-0548.98Show/hide
Query:  PQSVCSNIDKIIRSFLWHGANQSGSFPLVKWNLVAAPKEFGGLGFFKSR
        P  VC+NIDKI+R FLW   ++     +V W  V  PKE GGLG F++R
Subjt:  PQSVCSNIDKIIRSFLWHGANQSGSFPLVKWNLVAAPKEFGGLGFFKSR

TrEMBL top hitse value%identityAlignment
A0A151SI97 Putative ribonuclease H protein At1g65750 family4.2e-0543.06Show/hide
Query:  GRLHIYNNAVT------------PQSVCSNIDKIIRSFLWHGANQSGSFPLVKWNLVAAPKEFGGLGFFKSR
        GRL + N+ VT            PQ+VC+ I++  R+ LW  A  S  + LV WN V  PKEFGGLG  +SR
Subjt:  GRLHIYNNAVT------------PQSVCSNIDKIIRSFLWHGANQSGSFPLVKWNLVAAPKEFGGLGFFKSR

A0A151T541 Putative ribonuclease H protein At1g65750 family4.2e-0543.06Show/hide
Query:  GRLHIYNNAVT------------PQSVCSNIDKIIRSFLWHGANQSGSFPLVKWNLVAAPKEFGGLGFFKSR
        GRL + N+ VT            PQ+VC+ I++  R+ LW  A  S  + LV WN V  PKEFGGLG  +SR
Subjt:  GRLHIYNNAVT------------PQSVCSNIDKIIRSFLWHGANQSGSFPLVKWNLVAAPKEFGGLGFFKSR

A0A151TE58 Putative ribonuclease H protein At1g65750 family4.2e-0543.06Show/hide
Query:  GRLHIYNNAVT------------PQSVCSNIDKIIRSFLWHGANQSGSFPLVKWNLVAAPKEFGGLGFFKSR
        GRL + N+ VT            PQ+VC+ I++  R+ LW  A  S  + LV WN V  PKEFGGLG  +SR
Subjt:  GRLHIYNNAVT------------PQSVCSNIDKIIRSFLWHGANQSGSFPLVKWNLVAAPKEFGGLGFFKSR

A0A2N9EVJ4 RNase H domain-containing protein3.2e-0540.35Show/hide
Query:  HIYNNAVTPQSVCSNIDKIIRSFLWHGANQSGSFPLVKWNLVAAPKEFGGLGFFKSR
        H+    + P  VC+N+DK+ R+FLW   +      L+KW+L++ PK+ GGLG  +SR
Subjt:  HIYNNAVTPQSVCSNIDKIIRSFLWHGANQSGSFPLVKWNLVAAPKEFGGLGFFKSR

A0A438HIW1 Putative ribonuclease H protein4.2e-0542.42Show/hide
Query:  PQSVCSNIDKIIRSFLWHGANQSGSFPLVKWNLVAAPKEFGGLGFFKSRGAIPSQARGSSPPERHG
        P+S+ S I+K+ R FLW GA +     L+KW++V+ PKE GGLGF K+      +     P ER+G
Subjt:  PQSVCSNIDKIIRSFLWHGANQSGSFPLVKWNLVAAPKEFGGLGFFKSRGAIPSQARGSSPPERHG

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657505.3e-0537.74Show/hide
Query:  LHIYNNAVTPQSVCSNIDKIIRSFLWHGANQSGSFPLVKWNLVAAPKEFGGLG
        +H  +  + PQS+ + +D++ R+FLW    +     LVKW+ V +PK+ GGLG
Subjt:  LHIYNNAVTPQSVCSNIDKIIRSFLWHGANQSGSFPLVKWNLVAAPKEFGGLG

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCCTGGCGCGGTGGCAGGGGGCTGACCCCCTCGGGCAGCCCCCCGTTTTGTCTTTTCCCATTCGTCTTTTTCGTTCAACTAGATCCCAATGGGATTCTCAATTCCA
AGGTGCTAGGATGGGCCCTGGTAAATCGGCCCAGAAGCTAGAAGAAGCCAAGGAGAAGAAGGCCGAGGGGCCGGAGCCCAACCCGGCCCCCAGGACACGACGCTCGGCCT
CATCCCAAGGGAGAGGCCGAGCATGTGGTCGGCCTCGGCCCAATGCCGAGGCCGACCAGGGCCACAGGCCCATGAATGCTCCGGTGATGAGCAGCCGAAACCCTAAGGGG
ACTTACAAAAGGGGGGACGACCAACGCGTCAGGTATGCAAAACTTAACCCTAAGTACACGTTACTTGTTCTTCGGCCAGGAACTAACTTAAGCATCGGAGCACGCGTGGT
CTACACCACACCGGTGTGCAGCGTTTGTTTGATTTGCAGGTCACGCTCTTCCCGCATCTTTACAAATTCACTGCTGATCGTTGCGCGGAGCGAAGGGCAACTCCCTAAGC
AAAATTCAACCATCAACAACTTGTATTATGCAATTTGCAGGCTGGCATTAGACTTTAGAGAATATATAAATCATCAATGGAATGGAAGGCTGCATATATATAATAATGCA
GTTACCCCTCAATCGGTTTGCTCAAACATTGATAAGATCATCAGATCTTTCCTTTGGCATGGTGCTAATCAAAGTGGTAGCTTCCCTTTGGTCAAGTGGAATTTGGTGGC
AGCTCCAAAAGAGTTTGGGGGCCTGGGCTTCTTCAAGTCTAGGGGTGCTATTCCATCTCAAGCGCGCGGTTCGTCTCCTCCCGAGCGCCATGGTCTTCAGTTCTTAAACA
TGCCTCTATCTTCTAGGAGAATACTTTCTGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGCCTGGCGCGGTGGCAGGGGGCTGACCCCCTCGGGCAGCCCCCCGTTTTGTCTTTTCCCATTCGTCTTTTTCGTTCAACTAGATCCCAATGGGATTCTCAATTCCA
AGGTGCTAGGATGGGCCCTGGTAAATCGGCCCAGAAGCTAGAAGAAGCCAAGGAGAAGAAGGCCGAGGGGCCGGAGCCCAACCCGGCCCCCAGGACACGACGCTCGGCCT
CATCCCAAGGGAGAGGCCGAGCATGTGGTCGGCCTCGGCCCAATGCCGAGGCCGACCAGGGCCACAGGCCCATGAATGCTCCGGTGATGAGCAGCCGAAACCCTAAGGGG
ACTTACAAAAGGGGGGACGACCAACGCGTCAGGTATGCAAAACTTAACCCTAAGTACACGTTACTTGTTCTTCGGCCAGGAACTAACTTAAGCATCGGAGCACGCGTGGT
CTACACCACACCGGTGTGCAGCGTTTGTTTGATTTGCAGGTCACGCTCTTCCCGCATCTTTACAAATTCACTGCTGATCGTTGCGCGGAGCGAAGGGCAACTCCCTAAGC
AAAATTCAACCATCAACAACTTGTATTATGCAATTTGCAGGCTGGCATTAGACTTTAGAGAATATATAAATCATCAATGGAATGGAAGGCTGCATATATATAATAATGCA
GTTACCCCTCAATCGGTTTGCTCAAACATTGATAAGATCATCAGATCTTTCCTTTGGCATGGTGCTAATCAAAGTGGTAGCTTCCCTTTGGTCAAGTGGAATTTGGTGGC
AGCTCCAAAAGAGTTTGGGGGCCTGGGCTTCTTCAAGTCTAGGGGTGCTATTCCATCTCAAGCGCGCGGTTCGTCTCCTCCCGAGCGCCATGGTCTTCAGTTCTTAAACA
TGCCTCTATCTTCTAGGAGAATACTTTCTGGTTAG
Protein sequenceShow/hide protein sequence
MRLARWQGADPLGQPPVLSFPIRLFRSTRSQWDSQFQGARMGPGKSAQKLEEAKEKKAEGPEPNPAPRTRRSASSQGRGRACGRPRPNAEADQGHRPMNAPVMSSRNPKG
TYKRGDDQRVRYAKLNPKYTLLVLRPGTNLSIGARVVYTTPVCSVCLICRSRSSRIFTNSLLIVARSEGQLPKQNSTINNLYYAICRLALDFREYINHQWNGRLHIYNNA
VTPQSVCSNIDKIIRSFLWHGANQSGSFPLVKWNLVAAPKEFGGLGFFKSRGAIPSQARGSSPPERHGLQFLNMPLSSRRILSG